Literature DB >> 23185649

Disordered Protein Diffusion under Crowded Conditions.

Yaqiang Wang1, Laura A Benton, Vishavpreet Singh, Gary J Pielak.   

Abstract

Intrinsically disordered proteins are important in signaling, regulation, and translocation. Understanding their diffusion under physiologically relevant conditions will yield insight into their functions. We used NMR to quantify the translational diffusion of a globular and a disordered protein in dilute solution and under crowded conditions. In dilute solution, the globular protein chymotrypsin inhibitor 2 (CI2, 7.4 kDa) diffuses faster than the disordered protein α-synuclein (14 kDa). Surprisingly, the opposite occurs under crowded conditions; α-synuclein diffuses faster than CI2, even though α-synuclein is larger than CI2. These data show that shape is a key parameter determining protein diffusion under crowded conditions, adding to the properties known to be affected by macromolecular crowding. The results also offer a clue about why many signaling proteins are disordered.

Entities:  

Year:  2012        PMID: 23185649      PMCID: PMC3505085          DOI: 10.1021/jz3010915

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  36 in total

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Journal:  Eur J Biochem       Date:  2002-01

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Authors:  A S Morar; A Olteanu; G B Young; G J Pielak
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3.  Interaction of α-synuclein and a cell penetrating fusion peptide with higher eukaryotic cell membranes assessed by ¹⁹F NMR.

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Journal:  Curr Opin Biotechnol       Date:  2005-02       Impact factor: 9.740

5.  Anomalous diffusion of proteins due to molecular crowding.

Authors:  Daniel S Banks; Cécile Fradin
Journal:  Biophys J       Date:  2005-08-19       Impact factor: 4.033

Review 6.  Protein intrinsic disorder and oligomericity in cell signaling.

Authors:  Alexander B Sigalov
Journal:  Mol Biosyst       Date:  2009-11-03

7.  Temperature-induced reversible conformational change in the first 100 residues of alpha-synuclein.

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Journal:  Protein Sci       Date:  2006-02-01       Impact factor: 6.725

8.  Protein (19)F NMR in Escherichia coli.

Authors:  Conggang Li; Gui-Fang Wang; Yaqiang Wang; Rachel Creager-Allen; Evan A Lutz; Heidi Scronce; Kristin M Slade; Rebecca A S Ruf; Ryan A Mehl; Gary J Pielak
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9.  Protein nuclear magnetic resonance under physiological conditions.

Authors:  Gary J Pielak; Conggang Li; Andrew C Miklos; Alexander P Schlesinger; Kristin M Slade; Gui-Fang Wang; Imola G Zigoneanu
Journal:  Biochemistry       Date:  2009-01-20       Impact factor: 3.162

10.  Translational and rotational diffusion of a small globular protein under crowded conditions.

Authors:  Conggang Li; Yaqiang Wang; Gary J Pielak
Journal:  J Phys Chem B       Date:  2009-10-08       Impact factor: 2.991

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  18 in total

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Review 2.  Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding.

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Review 3.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

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4.  Molecular Effects of Concentrated Solutes on Protein Hydration, Dynamics, and Electrostatics.

Authors:  Luciano A Abriata; Enrico Spiga; Matteo Dal Peraro
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5.  Measuring translational diffusion of 15N-enriched biomolecules in complex solutions with a simplified 1H-15N HMQC-filtered BEST sequence.

Authors:  Shenggen Yao; Thomas G Meikle; Ashish Sethi; Frances Separovic; Jeffrey J Babon; David W Keizer
Journal:  Eur Biophys J       Date:  2018-05-21       Impact factor: 1.733

6.  The origin and impact of bound water around intrinsically disordered proteins.

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Journal:  Biophys J       Date:  2022-01-21       Impact factor: 4.033

7.  Quantification of Entropic Excluded Volume Effects Driving Crowding-Induced Collapse and Folding of a Disordered Protein.

Authors:  Divya Rajendran; Shrutarshi Mitra; Hiroyuki Oikawa; Kulkarni Madhurima; Ashok Sekhar; Satoshi Takahashi; Athi N Naganathan
Journal:  J Phys Chem Lett       Date:  2022-03-31       Impact factor: 6.888

8.  Computer Simulations of the Bacterial Cytoplasm.

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Journal:  Biophys Rev       Date:  2013-06-01

9.  Thermal aggregation of hen egg white proteins in the presence of salts.

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Journal:  Protein J       Date:  2015-06       Impact factor: 2.371

10.  Flexibility of Oxidized and Reduced States of the Chloroplast Regulatory Protein CP12 in Isolation and in Cell Extracts.

Authors:  Helene Launay; Hui Shao; Olivier Bornet; Francois-Xavier Cantrelle; Regine Lebrun; Veronique Receveur-Brechot; Brigitte Gontero
Journal:  Biomolecules       Date:  2021-05-08
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