| Literature DB >> 23125805 |
J Josephine Novina1, G Vasuki, Yun Liu, Jin-Wei Sun.
Abstract
In the title compound, C(25)H(17)NO(4), the indolizine fused naphthaquinone unit is approximately planar [r.m.s deviation = 0.0678 Å] and makes a dihedral angle of 57.82 (5)° with the benzene ring of the meth-oxy-benzene group. The naphtho-quinone O atoms deviate, in the same sense, from the mean plane of the fused six-membered rings by 0.2001 (14) and 0.0516 (14) Å. In the crystal there is π-π stacking of inversion-related pairs of mol-ecules [inter-planar spacing = 3.514 (2) Å].Entities:
Year: 2012 PMID: 23125805 PMCID: PMC3470392 DOI: 10.1107/S1600536812040408
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H17NO4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5015 reflections |
| θ = 2.2–26.3° | |
| µ = 0.09 mm−1 | |
| β = 97.304 (2)° | Block, brown |
| 0.30 × 0.20 × 0.20 mm | |
| Bruker Kappa APEXII CCD diffractometer | 3852 independent reflections |
| Radiation source: fine-focus sealed tube | 2856 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 26.3°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 18096 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3852 reflections | (Δ/σ)max < 0.001 |
| 271 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N | 0.17994 (16) | 0.53308 (6) | 0.57068 (13) | 0.0388 (3) | |
| O2 | 0.34773 (17) | 0.42161 (6) | 0.56349 (14) | 0.0628 (4) | |
| C8 | 0.24197 (19) | 0.50723 (7) | 0.46488 (15) | 0.0376 (4) | |
| C9 | 0.21764 (19) | 0.54500 (7) | 0.35825 (16) | 0.0383 (4) | |
| O1 | 0.2104 (2) | 0.55356 (6) | 0.12630 (12) | 0.0652 (4) | |
| C6 | 0.3785 (2) | 0.43608 (7) | 0.33619 (18) | 0.0435 (4) | |
| C18 | 0.0992 (2) | 0.64903 (7) | 0.32447 (17) | 0.0439 (4) | |
| C19 | 0.2224 (2) | 0.67504 (7) | 0.24748 (16) | 0.0379 (4) | |
| C1 | 0.3460 (2) | 0.47115 (7) | 0.22307 (18) | 0.0443 (4) | |
| C21 | 0.5041 (2) | 0.68874 (7) | 0.20229 (17) | 0.0431 (4) | |
| H21 | 0.6165 | 0.6806 | 0.2219 | 0.052* | |
| O3 | −0.03169 (17) | 0.67344 (7) | 0.33481 (16) | 0.0714 (5) | |
| C16 | 0.1778 (2) | 0.51365 (9) | 0.69868 (16) | 0.0477 (4) | |
| H16 | 0.2195 | 0.4776 | 0.7238 | 0.057* | |
| C10 | 0.2554 (2) | 0.52654 (7) | 0.22716 (17) | 0.0444 (4) | |
| C12 | 0.11594 (19) | 0.58666 (7) | 0.53067 (16) | 0.0399 (4) | |
| C7 | 0.3231 (2) | 0.45262 (8) | 0.46517 (17) | 0.0426 (4) | |
| C14 | 0.0491 (2) | 0.60280 (9) | 0.75177 (18) | 0.0509 (5) | |
| C23 | 0.2821 (2) | 0.74026 (8) | 0.0772 (2) | 0.0539 (5) | |
| H23 | 0.2453 | 0.7662 | 0.0101 | 0.065* | |
| O4 | 0.54786 (16) | 0.75454 (6) | 0.02430 (14) | 0.0634 (4) | |
| C20 | 0.3900 (2) | 0.66254 (7) | 0.27206 (16) | 0.0409 (4) | |
| H20 | 0.4265 | 0.6358 | 0.3373 | 0.049* | |
| C13 | 0.0496 (2) | 0.62101 (8) | 0.62437 (18) | 0.0464 (4) | |
| H13 | 0.0052 | 0.6567 | 0.5991 | 0.056* | |
| C22 | 0.4494 (2) | 0.72723 (7) | 0.10299 (17) | 0.0443 (4) | |
| C2 | 0.3967 (2) | 0.45322 (9) | 0.1042 (2) | 0.0553 (5) | |
| H2 | 0.3732 | 0.4758 | 0.0285 | 0.066* | |
| C11 | 0.14110 (19) | 0.59490 (7) | 0.39734 (16) | 0.0403 (4) | |
| C24 | 0.1712 (2) | 0.71529 (8) | 0.14967 (18) | 0.0483 (4) | |
| H24 | 0.0598 | 0.7253 | 0.1334 | 0.058* | |
| C15 | 0.1142 (2) | 0.54769 (9) | 0.78676 (18) | 0.0539 (5) | |
| H15 | 0.1129 | 0.5346 | 0.8732 | 0.065* | |
| C4 | 0.5135 (3) | 0.36798 (9) | 0.2080 (2) | 0.0644 (6) | |
| H4 | 0.5702 | 0.3335 | 0.2030 | 0.077* | |
| C5 | 0.4614 (2) | 0.38467 (8) | 0.3266 (2) | 0.0538 (5) | |
| H5 | 0.4824 | 0.3611 | 0.4008 | 0.065* | |
| C17 | −0.0160 (3) | 0.63983 (11) | 0.8546 (2) | 0.0731 (7) | |
| H17A | −0.0058 | 0.6197 | 0.9379 | 0.110* | |
| H17B | −0.1305 | 0.6486 | 0.8270 | 0.110* | |
| H17C | 0.0467 | 0.6748 | 0.8649 | 0.110* | |
| C3 | 0.4816 (3) | 0.40227 (9) | 0.0974 (2) | 0.0646 (6) | |
| H3 | 0.5174 | 0.3911 | 0.0178 | 0.077* | |
| C25 | 0.7210 (2) | 0.74482 (11) | 0.0475 (3) | 0.0754 (7) | |
| H25A | 0.7748 | 0.7666 | −0.0149 | 0.113* | |
| H25B | 0.7430 | 0.7047 | 0.0368 | 0.113* | |
| H25C | 0.7624 | 0.7565 | 0.1362 | 0.113* |
| N | 0.0378 (7) | 0.0458 (8) | 0.0328 (7) | −0.0053 (6) | 0.0042 (6) | 0.0017 (6) |
| O2 | 0.0696 (9) | 0.0613 (9) | 0.0577 (8) | 0.0171 (7) | 0.0086 (7) | 0.0195 (7) |
| C8 | 0.0367 (8) | 0.0409 (9) | 0.0352 (9) | −0.0036 (7) | 0.0045 (7) | 0.0012 (7) |
| C9 | 0.0375 (8) | 0.0406 (9) | 0.0370 (9) | −0.0022 (7) | 0.0061 (7) | 0.0005 (7) |
| O1 | 0.1040 (11) | 0.0559 (8) | 0.0363 (7) | 0.0112 (8) | 0.0117 (7) | 0.0047 (6) |
| C6 | 0.0366 (9) | 0.0411 (10) | 0.0529 (11) | −0.0042 (7) | 0.0058 (8) | −0.0034 (8) |
| C18 | 0.0452 (10) | 0.0427 (10) | 0.0444 (10) | 0.0067 (8) | 0.0081 (8) | 0.0021 (8) |
| C19 | 0.0417 (9) | 0.0344 (9) | 0.0377 (9) | 0.0031 (7) | 0.0049 (7) | −0.0014 (7) |
| C1 | 0.0436 (9) | 0.0431 (10) | 0.0479 (10) | −0.0067 (7) | 0.0123 (8) | −0.0052 (8) |
| C21 | 0.0389 (9) | 0.0444 (10) | 0.0453 (10) | 0.0049 (7) | 0.0033 (7) | −0.0012 (8) |
| O3 | 0.0561 (8) | 0.0741 (10) | 0.0893 (11) | 0.0229 (7) | 0.0302 (8) | 0.0266 (8) |
| C16 | 0.0476 (10) | 0.0604 (12) | 0.0346 (9) | −0.0068 (9) | 0.0031 (8) | 0.0086 (9) |
| C10 | 0.0543 (10) | 0.0411 (10) | 0.0388 (10) | −0.0048 (8) | 0.0097 (8) | 0.0002 (8) |
| C12 | 0.0353 (8) | 0.0445 (9) | 0.0402 (9) | −0.0055 (7) | 0.0056 (7) | −0.0012 (8) |
| C7 | 0.0374 (9) | 0.0446 (10) | 0.0447 (10) | −0.0034 (7) | 0.0014 (7) | 0.0053 (8) |
| C14 | 0.0436 (10) | 0.0670 (13) | 0.0433 (10) | −0.0125 (9) | 0.0095 (8) | −0.0108 (9) |
| C23 | 0.0517 (11) | 0.0515 (11) | 0.0579 (12) | 0.0064 (9) | 0.0044 (9) | 0.0211 (9) |
| O4 | 0.0549 (8) | 0.0670 (9) | 0.0710 (9) | −0.0051 (7) | 0.0179 (7) | 0.0200 (7) |
| C20 | 0.0460 (9) | 0.0394 (9) | 0.0365 (9) | 0.0073 (7) | 0.0017 (7) | 0.0036 (7) |
| C13 | 0.0422 (9) | 0.0507 (10) | 0.0473 (10) | −0.0040 (8) | 0.0102 (8) | −0.0081 (8) |
| C22 | 0.0485 (10) | 0.0394 (9) | 0.0462 (10) | −0.0028 (8) | 0.0108 (8) | −0.0006 (8) |
| C2 | 0.0608 (12) | 0.0542 (11) | 0.0543 (11) | −0.0064 (9) | 0.0202 (9) | −0.0091 (9) |
| C11 | 0.0399 (9) | 0.0423 (9) | 0.0395 (9) | −0.0012 (7) | 0.0079 (7) | 0.0011 (7) |
| C24 | 0.0383 (9) | 0.0473 (10) | 0.0582 (11) | 0.0071 (8) | 0.0024 (8) | 0.0112 (9) |
| C15 | 0.0534 (11) | 0.0751 (14) | 0.0335 (9) | −0.0127 (10) | 0.0073 (8) | −0.0006 (9) |
| C4 | 0.0555 (12) | 0.0530 (12) | 0.0865 (16) | 0.0040 (10) | 0.0153 (11) | −0.0176 (12) |
| C5 | 0.0478 (10) | 0.0449 (10) | 0.0682 (13) | 0.0010 (8) | 0.0054 (9) | −0.0037 (9) |
| C17 | 0.0779 (15) | 0.0912 (17) | 0.0537 (12) | −0.0094 (13) | 0.0219 (11) | −0.0256 (12) |
| C3 | 0.0655 (13) | 0.0615 (13) | 0.0712 (14) | −0.0054 (11) | 0.0266 (11) | −0.0222 (12) |
| C25 | 0.0506 (12) | 0.0877 (17) | 0.0921 (17) | −0.0101 (11) | 0.0251 (12) | 0.0067 (14) |
| N—C16 | 1.378 (2) | C14—C13 | 1.361 (3) |
| N—C8 | 1.381 (2) | C14—C15 | 1.416 (3) |
| N—C12 | 1.393 (2) | C14—C17 | 1.502 (3) |
| O2—C7 | 1.228 (2) | C23—C24 | 1.365 (2) |
| C8—C9 | 1.389 (2) | C23—C22 | 1.386 (3) |
| C8—C7 | 1.433 (2) | C23—H23 | 0.9300 |
| C9—C11 | 1.400 (2) | O4—C22 | 1.359 (2) |
| C9—C10 | 1.467 (2) | O4—C25 | 1.416 (2) |
| O1—C10 | 1.218 (2) | C20—H20 | 0.9300 |
| C6—C5 | 1.384 (2) | C13—H13 | 0.9300 |
| C6—C1 | 1.407 (2) | C2—C3 | 1.379 (3) |
| C6—C7 | 1.489 (2) | C2—H2 | 0.9300 |
| C18—O3 | 1.223 (2) | C24—H24 | 0.9300 |
| C18—C19 | 1.477 (2) | C15—H15 | 0.9300 |
| C18—C11 | 1.479 (2) | C4—C3 | 1.375 (3) |
| C19—C20 | 1.385 (2) | C4—C5 | 1.382 (3) |
| C19—C24 | 1.390 (2) | C4—H4 | 0.9300 |
| C1—C2 | 1.388 (2) | C5—H5 | 0.9300 |
| C1—C10 | 1.489 (2) | C17—H17A | 0.9600 |
| C21—C20 | 1.379 (2) | C17—H17B | 0.9600 |
| C21—C22 | 1.380 (2) | C17—H17C | 0.9600 |
| C21—H21 | 0.9300 | C3—H3 | 0.9300 |
| C16—C15 | 1.347 (3) | C25—H25A | 0.9600 |
| C16—H16 | 0.9300 | C25—H25B | 0.9600 |
| C12—C13 | 1.402 (2) | C25—H25C | 0.9600 |
| C12—C11 | 1.407 (2) | ||
| C16—N—C8 | 129.76 (15) | C21—C20—C19 | 121.72 (15) |
| C16—N—C12 | 121.34 (15) | C21—C20—H20 | 119.1 |
| C8—N—C12 | 108.89 (13) | C19—C20—H20 | 119.1 |
| N—C8—C9 | 107.44 (14) | C14—C13—C12 | 120.95 (18) |
| N—C8—C7 | 126.80 (14) | C14—C13—H13 | 119.5 |
| C9—C8—C7 | 125.71 (15) | C12—C13—H13 | 119.5 |
| C8—C9—C11 | 109.24 (14) | O4—C22—C21 | 125.05 (16) |
| C8—C9—C10 | 119.70 (15) | O4—C22—C23 | 115.09 (16) |
| C11—C9—C10 | 130.71 (15) | C21—C22—C23 | 119.86 (16) |
| C5—C6—C1 | 119.22 (17) | C3—C2—C1 | 120.6 (2) |
| C5—C6—C7 | 119.38 (17) | C3—C2—H2 | 119.7 |
| C1—C6—C7 | 121.39 (15) | C1—C2—H2 | 119.7 |
| O3—C18—C19 | 120.77 (16) | C9—C11—C12 | 106.48 (14) |
| O3—C18—C11 | 120.06 (16) | C9—C11—C18 | 130.43 (15) |
| C19—C18—C11 | 119.03 (14) | C12—C11—C18 | 122.99 (15) |
| C20—C19—C24 | 117.97 (15) | C23—C24—C19 | 120.92 (16) |
| C20—C19—C18 | 122.49 (15) | C23—C24—H24 | 119.5 |
| C24—C19—C18 | 119.50 (15) | C19—C24—H24 | 119.5 |
| C2—C1—C6 | 119.25 (17) | C16—C15—C14 | 122.00 (17) |
| C2—C1—C10 | 119.19 (17) | C16—C15—H15 | 119.0 |
| C6—C1—C10 | 121.54 (15) | C14—C15—H15 | 119.0 |
| C20—C21—C22 | 119.14 (16) | C3—C4—C5 | 120.08 (19) |
| C20—C21—H21 | 120.4 | C3—C4—H4 | 120.0 |
| C22—C21—H21 | 120.4 | C5—C4—H4 | 120.0 |
| C15—C16—N | 119.00 (18) | C4—C5—C6 | 120.7 (2) |
| C15—C16—H16 | 120.5 | C4—C5—H5 | 119.6 |
| N—C16—H16 | 120.5 | C6—C5—H5 | 119.6 |
| O1—C10—C9 | 122.39 (16) | C14—C17—H17A | 109.5 |
| O1—C10—C1 | 121.42 (16) | C14—C17—H17B | 109.5 |
| C9—C10—C1 | 116.13 (15) | H17A—C17—H17B | 109.5 |
| N—C12—C13 | 118.38 (15) | C14—C17—H17C | 109.5 |
| N—C12—C11 | 107.93 (14) | H17A—C17—H17C | 109.5 |
| C13—C12—C11 | 133.63 (17) | H17B—C17—H17C | 109.5 |
| O2—C7—C8 | 123.46 (17) | C4—C3—C2 | 120.1 (2) |
| O2—C7—C6 | 121.77 (16) | C4—C3—H3 | 119.9 |
| C8—C7—C6 | 114.76 (15) | C2—C3—H3 | 119.9 |
| C13—C14—C15 | 118.33 (17) | O4—C25—H25A | 109.5 |
| C13—C14—C17 | 121.7 (2) | O4—C25—H25B | 109.5 |
| C15—C14—C17 | 119.98 (18) | H25A—C25—H25B | 109.5 |
| C24—C23—C22 | 120.34 (17) | O4—C25—H25C | 109.5 |
| C24—C23—H23 | 119.8 | H25A—C25—H25C | 109.5 |
| C22—C23—H23 | 119.8 | H25B—C25—H25C | 109.5 |
| C22—O4—C25 | 118.39 (16) | ||
| C16—N—C8—C9 | −178.53 (15) | C22—C21—C20—C19 | −1.8 (3) |
| C12—N—C8—C9 | 0.38 (17) | C24—C19—C20—C21 | −0.2 (3) |
| C16—N—C8—C7 | −1.0 (3) | C18—C19—C20—C21 | −177.69 (16) |
| C12—N—C8—C7 | 177.96 (15) | C15—C14—C13—C12 | −1.4 (3) |
| N—C8—C9—C11 | 0.40 (18) | C17—C14—C13—C12 | 177.84 (17) |
| C7—C8—C9—C11 | −177.21 (15) | N—C12—C13—C14 | 0.7 (2) |
| N—C8—C9—C10 | −173.46 (14) | C11—C12—C13—C14 | −176.11 (17) |
| C7—C8—C9—C10 | 8.9 (2) | C25—O4—C22—C21 | −2.3 (3) |
| O3—C18—C19—C20 | 154.62 (18) | C25—O4—C22—C23 | 178.04 (18) |
| C11—C18—C19—C20 | −21.0 (2) | C20—C21—C22—O4 | −177.84 (17) |
| O3—C18—C19—C24 | −22.9 (3) | C20—C21—C22—C23 | 1.8 (3) |
| C11—C18—C19—C24 | 161.52 (16) | C24—C23—C22—O4 | 179.80 (17) |
| C5—C6—C1—C2 | 0.4 (3) | C24—C23—C22—C21 | 0.1 (3) |
| C7—C6—C1—C2 | −178.47 (16) | C6—C1—C2—C3 | −1.5 (3) |
| C5—C6—C1—C10 | 179.22 (16) | C10—C1—C2—C3 | 179.66 (17) |
| C7—C6—C1—C10 | 0.3 (2) | C8—C9—C11—C12 | −1.00 (18) |
| C8—N—C16—C15 | 177.94 (16) | C10—C9—C11—C12 | 171.95 (17) |
| C12—N—C16—C15 | −0.9 (2) | C8—C9—C11—C18 | 175.43 (16) |
| C8—C9—C10—O1 | 167.00 (17) | C10—C9—C11—C18 | −11.6 (3) |
| C11—C9—C10—O1 | −5.3 (3) | N—C12—C11—C9 | 1.22 (18) |
| C8—C9—C10—C1 | −10.4 (2) | C13—C12—C11—C9 | 178.26 (17) |
| C11—C9—C10—C1 | 177.31 (16) | N—C12—C11—C18 | −175.55 (14) |
| C2—C1—C10—O1 | 7.4 (3) | C13—C12—C11—C18 | 1.5 (3) |
| C6—C1—C10—O1 | −171.35 (17) | O3—C18—C11—C9 | 140.6 (2) |
| C2—C1—C10—C9 | −175.19 (16) | C19—C18—C11—C9 | −43.8 (3) |
| C6—C1—C10—C9 | 6.0 (2) | O3—C18—C11—C12 | −43.5 (3) |
| C16—N—C12—C13 | 0.5 (2) | C19—C18—C11—C12 | 132.13 (17) |
| C8—N—C12—C13 | −178.57 (14) | C22—C23—C24—C19 | −2.1 (3) |
| C16—N—C12—C11 | 178.02 (14) | C20—C19—C24—C23 | 2.1 (3) |
| C8—N—C12—C11 | −1.00 (17) | C18—C19—C24—C23 | 179.74 (17) |
| N—C8—C7—O2 | −0.2 (3) | N—C16—C15—C14 | 0.2 (3) |
| C9—C8—C7—O2 | 176.99 (17) | C13—C14—C15—C16 | 1.0 (3) |
| N—C8—C7—C6 | −179.40 (14) | C17—C14—C15—C16 | −178.26 (18) |
| C9—C8—C7—C6 | −2.2 (2) | C3—C4—C5—C6 | −0.7 (3) |
| C5—C6—C7—O2 | −0.6 (3) | C1—C6—C5—C4 | 0.7 (3) |
| C1—C6—C7—O2 | 178.29 (16) | C7—C6—C5—C4 | 179.60 (16) |
| C5—C6—C7—C8 | 178.63 (15) | C5—C4—C3—C2 | −0.4 (3) |
| C1—C6—C7—C8 | −2.5 (2) | C1—C2—C3—C4 | 1.5 (3) |