Literature DB >> 23125805

12-(4-Meth-oxy-benzo-yl)-2-methyl-benzo[f]pyrido[1,2-a]indole-6,11-dione.

J Josephine Novina1, G Vasuki, Yun Liu, Jin-Wei Sun.   

Abstract

In the title compound, C(25)H(17)NO(4), the indolizine fused naphthaquinone unit is approximately planar [r.m.s deviation = 0.0678 Å] and makes a dihedral angle of 57.82 (5)° with the benzene ring of the meth-oxy-benzene group. The naphtho-quinone O atoms deviate, in the same sense, from the mean plane of the fused six-membered rings by 0.2001 (14) and 0.0516 (14) Å. In the crystal there is π-π stacking of inversion-related pairs of mol-ecules [inter-planar spacing = 3.514 (2) Å].

Entities:  

Year:  2012        PMID: 23125805      PMCID: PMC3470392          DOI: 10.1107/S1600536812040408

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the applications and biological activity of indolizine derivatives, see: Švorc et al. (2009 ▶). For the synthesis of indolizines, see: Babaev et al. (2005 ▶), and for their use as inter­mediates in the synthesis of indolizidines, see: Kloubert et al. (2012 ▶). For the crystal structures of similar compounds, see: Liu et al. (2011 ▶); Ramesh et al. (2009 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C25H17NO4 M = 395.40 Monoclinic, a = 8.1346 (3) Å b = 23.2926 (8) Å c = 10.1505 (3) Å β = 97.304 (2)° V = 1907.67 (11) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.30 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.972, T max = 0.982 18096 measured reflections 3852 independent reflections 2856 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.120 S = 1.04 3852 reflections 271 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812040408/pk2443sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812040408/pk2443Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812040408/pk2443Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H17NO4F(000) = 824
Mr = 395.40Dx = 1.377 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5015 reflections
a = 8.1346 (3) Åθ = 2.2–26.3°
b = 23.2926 (8) ŵ = 0.09 mm1
c = 10.1505 (3) ÅT = 293 K
β = 97.304 (2)°Block, brown
V = 1907.67 (11) Å30.30 × 0.20 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3852 independent reflections
Radiation source: fine-focus sealed tube2856 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
ω and φ scanθmax = 26.3°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −10→10
Tmin = 0.972, Tmax = 0.982k = −28→29
18096 measured reflectionsl = −12→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0533P)2 + 0.4967P] where P = (Fo2 + 2Fc2)/3
3852 reflections(Δ/σ)max < 0.001
271 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N0.17994 (16)0.53308 (6)0.57068 (13)0.0388 (3)
O20.34773 (17)0.42161 (6)0.56349 (14)0.0628 (4)
C80.24197 (19)0.50723 (7)0.46488 (15)0.0376 (4)
C90.21764 (19)0.54500 (7)0.35825 (16)0.0383 (4)
O10.2104 (2)0.55356 (6)0.12630 (12)0.0652 (4)
C60.3785 (2)0.43608 (7)0.33619 (18)0.0435 (4)
C180.0992 (2)0.64903 (7)0.32447 (17)0.0439 (4)
C190.2224 (2)0.67504 (7)0.24748 (16)0.0379 (4)
C10.3460 (2)0.47115 (7)0.22307 (18)0.0443 (4)
C210.5041 (2)0.68874 (7)0.20229 (17)0.0431 (4)
H210.61650.68060.22190.052*
O3−0.03169 (17)0.67344 (7)0.33481 (16)0.0714 (5)
C160.1778 (2)0.51365 (9)0.69868 (16)0.0477 (4)
H160.21950.47760.72380.057*
C100.2554 (2)0.52654 (7)0.22716 (17)0.0444 (4)
C120.11594 (19)0.58666 (7)0.53067 (16)0.0399 (4)
C70.3231 (2)0.45262 (8)0.46517 (17)0.0426 (4)
C140.0491 (2)0.60280 (9)0.75177 (18)0.0509 (5)
C230.2821 (2)0.74026 (8)0.0772 (2)0.0539 (5)
H230.24530.76620.01010.065*
O40.54786 (16)0.75454 (6)0.02430 (14)0.0634 (4)
C200.3900 (2)0.66254 (7)0.27206 (16)0.0409 (4)
H200.42650.63580.33730.049*
C130.0496 (2)0.62101 (8)0.62437 (18)0.0464 (4)
H130.00520.65670.59910.056*
C220.4494 (2)0.72723 (7)0.10299 (17)0.0443 (4)
C20.3967 (2)0.45322 (9)0.1042 (2)0.0553 (5)
H20.37320.47580.02850.066*
C110.14110 (19)0.59490 (7)0.39734 (16)0.0403 (4)
C240.1712 (2)0.71529 (8)0.14967 (18)0.0483 (4)
H240.05980.72530.13340.058*
C150.1142 (2)0.54769 (9)0.78676 (18)0.0539 (5)
H150.11290.53460.87320.065*
C40.5135 (3)0.36798 (9)0.2080 (2)0.0644 (6)
H40.57020.33350.20300.077*
C50.4614 (2)0.38467 (8)0.3266 (2)0.0538 (5)
H50.48240.36110.40080.065*
C17−0.0160 (3)0.63983 (11)0.8546 (2)0.0731 (7)
H17A−0.00580.61970.93790.110*
H17B−0.13050.64860.82700.110*
H17C0.04670.67480.86490.110*
C30.4816 (3)0.40227 (9)0.0974 (2)0.0646 (6)
H30.51740.39110.01780.077*
C250.7210 (2)0.74482 (11)0.0475 (3)0.0754 (7)
H25A0.77480.7666−0.01490.113*
H25B0.74300.70470.03680.113*
H25C0.76240.75650.13620.113*
U11U22U33U12U13U23
N0.0378 (7)0.0458 (8)0.0328 (7)−0.0053 (6)0.0042 (6)0.0017 (6)
O20.0696 (9)0.0613 (9)0.0577 (8)0.0171 (7)0.0086 (7)0.0195 (7)
C80.0367 (8)0.0409 (9)0.0352 (9)−0.0036 (7)0.0045 (7)0.0012 (7)
C90.0375 (8)0.0406 (9)0.0370 (9)−0.0022 (7)0.0061 (7)0.0005 (7)
O10.1040 (11)0.0559 (8)0.0363 (7)0.0112 (8)0.0117 (7)0.0047 (6)
C60.0366 (9)0.0411 (10)0.0529 (11)−0.0042 (7)0.0058 (8)−0.0034 (8)
C180.0452 (10)0.0427 (10)0.0444 (10)0.0067 (8)0.0081 (8)0.0021 (8)
C190.0417 (9)0.0344 (9)0.0377 (9)0.0031 (7)0.0049 (7)−0.0014 (7)
C10.0436 (9)0.0431 (10)0.0479 (10)−0.0067 (7)0.0123 (8)−0.0052 (8)
C210.0389 (9)0.0444 (10)0.0453 (10)0.0049 (7)0.0033 (7)−0.0012 (8)
O30.0561 (8)0.0741 (10)0.0893 (11)0.0229 (7)0.0302 (8)0.0266 (8)
C160.0476 (10)0.0604 (12)0.0346 (9)−0.0068 (9)0.0031 (8)0.0086 (9)
C100.0543 (10)0.0411 (10)0.0388 (10)−0.0048 (8)0.0097 (8)0.0002 (8)
C120.0353 (8)0.0445 (9)0.0402 (9)−0.0055 (7)0.0056 (7)−0.0012 (8)
C70.0374 (9)0.0446 (10)0.0447 (10)−0.0034 (7)0.0014 (7)0.0053 (8)
C140.0436 (10)0.0670 (13)0.0433 (10)−0.0125 (9)0.0095 (8)−0.0108 (9)
C230.0517 (11)0.0515 (11)0.0579 (12)0.0064 (9)0.0044 (9)0.0211 (9)
O40.0549 (8)0.0670 (9)0.0710 (9)−0.0051 (7)0.0179 (7)0.0200 (7)
C200.0460 (9)0.0394 (9)0.0365 (9)0.0073 (7)0.0017 (7)0.0036 (7)
C130.0422 (9)0.0507 (10)0.0473 (10)−0.0040 (8)0.0102 (8)−0.0081 (8)
C220.0485 (10)0.0394 (9)0.0462 (10)−0.0028 (8)0.0108 (8)−0.0006 (8)
C20.0608 (12)0.0542 (11)0.0543 (11)−0.0064 (9)0.0202 (9)−0.0091 (9)
C110.0399 (9)0.0423 (9)0.0395 (9)−0.0012 (7)0.0079 (7)0.0011 (7)
C240.0383 (9)0.0473 (10)0.0582 (11)0.0071 (8)0.0024 (8)0.0112 (9)
C150.0534 (11)0.0751 (14)0.0335 (9)−0.0127 (10)0.0073 (8)−0.0006 (9)
C40.0555 (12)0.0530 (12)0.0865 (16)0.0040 (10)0.0153 (11)−0.0176 (12)
C50.0478 (10)0.0449 (10)0.0682 (13)0.0010 (8)0.0054 (9)−0.0037 (9)
C170.0779 (15)0.0912 (17)0.0537 (12)−0.0094 (13)0.0219 (11)−0.0256 (12)
C30.0655 (13)0.0615 (13)0.0712 (14)−0.0054 (11)0.0266 (11)−0.0222 (12)
C250.0506 (12)0.0877 (17)0.0921 (17)−0.0101 (11)0.0251 (12)0.0067 (14)
N—C161.378 (2)C14—C131.361 (3)
N—C81.381 (2)C14—C151.416 (3)
N—C121.393 (2)C14—C171.502 (3)
O2—C71.228 (2)C23—C241.365 (2)
C8—C91.389 (2)C23—C221.386 (3)
C8—C71.433 (2)C23—H230.9300
C9—C111.400 (2)O4—C221.359 (2)
C9—C101.467 (2)O4—C251.416 (2)
O1—C101.218 (2)C20—H200.9300
C6—C51.384 (2)C13—H130.9300
C6—C11.407 (2)C2—C31.379 (3)
C6—C71.489 (2)C2—H20.9300
C18—O31.223 (2)C24—H240.9300
C18—C191.477 (2)C15—H150.9300
C18—C111.479 (2)C4—C31.375 (3)
C19—C201.385 (2)C4—C51.382 (3)
C19—C241.390 (2)C4—H40.9300
C1—C21.388 (2)C5—H50.9300
C1—C101.489 (2)C17—H17A0.9600
C21—C201.379 (2)C17—H17B0.9600
C21—C221.380 (2)C17—H17C0.9600
C21—H210.9300C3—H30.9300
C16—C151.347 (3)C25—H25A0.9600
C16—H160.9300C25—H25B0.9600
C12—C131.402 (2)C25—H25C0.9600
C12—C111.407 (2)
C16—N—C8129.76 (15)C21—C20—C19121.72 (15)
C16—N—C12121.34 (15)C21—C20—H20119.1
C8—N—C12108.89 (13)C19—C20—H20119.1
N—C8—C9107.44 (14)C14—C13—C12120.95 (18)
N—C8—C7126.80 (14)C14—C13—H13119.5
C9—C8—C7125.71 (15)C12—C13—H13119.5
C8—C9—C11109.24 (14)O4—C22—C21125.05 (16)
C8—C9—C10119.70 (15)O4—C22—C23115.09 (16)
C11—C9—C10130.71 (15)C21—C22—C23119.86 (16)
C5—C6—C1119.22 (17)C3—C2—C1120.6 (2)
C5—C6—C7119.38 (17)C3—C2—H2119.7
C1—C6—C7121.39 (15)C1—C2—H2119.7
O3—C18—C19120.77 (16)C9—C11—C12106.48 (14)
O3—C18—C11120.06 (16)C9—C11—C18130.43 (15)
C19—C18—C11119.03 (14)C12—C11—C18122.99 (15)
C20—C19—C24117.97 (15)C23—C24—C19120.92 (16)
C20—C19—C18122.49 (15)C23—C24—H24119.5
C24—C19—C18119.50 (15)C19—C24—H24119.5
C2—C1—C6119.25 (17)C16—C15—C14122.00 (17)
C2—C1—C10119.19 (17)C16—C15—H15119.0
C6—C1—C10121.54 (15)C14—C15—H15119.0
C20—C21—C22119.14 (16)C3—C4—C5120.08 (19)
C20—C21—H21120.4C3—C4—H4120.0
C22—C21—H21120.4C5—C4—H4120.0
C15—C16—N119.00 (18)C4—C5—C6120.7 (2)
C15—C16—H16120.5C4—C5—H5119.6
N—C16—H16120.5C6—C5—H5119.6
O1—C10—C9122.39 (16)C14—C17—H17A109.5
O1—C10—C1121.42 (16)C14—C17—H17B109.5
C9—C10—C1116.13 (15)H17A—C17—H17B109.5
N—C12—C13118.38 (15)C14—C17—H17C109.5
N—C12—C11107.93 (14)H17A—C17—H17C109.5
C13—C12—C11133.63 (17)H17B—C17—H17C109.5
O2—C7—C8123.46 (17)C4—C3—C2120.1 (2)
O2—C7—C6121.77 (16)C4—C3—H3119.9
C8—C7—C6114.76 (15)C2—C3—H3119.9
C13—C14—C15118.33 (17)O4—C25—H25A109.5
C13—C14—C17121.7 (2)O4—C25—H25B109.5
C15—C14—C17119.98 (18)H25A—C25—H25B109.5
C24—C23—C22120.34 (17)O4—C25—H25C109.5
C24—C23—H23119.8H25A—C25—H25C109.5
C22—C23—H23119.8H25B—C25—H25C109.5
C22—O4—C25118.39 (16)
C16—N—C8—C9−178.53 (15)C22—C21—C20—C19−1.8 (3)
C12—N—C8—C90.38 (17)C24—C19—C20—C21−0.2 (3)
C16—N—C8—C7−1.0 (3)C18—C19—C20—C21−177.69 (16)
C12—N—C8—C7177.96 (15)C15—C14—C13—C12−1.4 (3)
N—C8—C9—C110.40 (18)C17—C14—C13—C12177.84 (17)
C7—C8—C9—C11−177.21 (15)N—C12—C13—C140.7 (2)
N—C8—C9—C10−173.46 (14)C11—C12—C13—C14−176.11 (17)
C7—C8—C9—C108.9 (2)C25—O4—C22—C21−2.3 (3)
O3—C18—C19—C20154.62 (18)C25—O4—C22—C23178.04 (18)
C11—C18—C19—C20−21.0 (2)C20—C21—C22—O4−177.84 (17)
O3—C18—C19—C24−22.9 (3)C20—C21—C22—C231.8 (3)
C11—C18—C19—C24161.52 (16)C24—C23—C22—O4179.80 (17)
C5—C6—C1—C20.4 (3)C24—C23—C22—C210.1 (3)
C7—C6—C1—C2−178.47 (16)C6—C1—C2—C3−1.5 (3)
C5—C6—C1—C10179.22 (16)C10—C1—C2—C3179.66 (17)
C7—C6—C1—C100.3 (2)C8—C9—C11—C12−1.00 (18)
C8—N—C16—C15177.94 (16)C10—C9—C11—C12171.95 (17)
C12—N—C16—C15−0.9 (2)C8—C9—C11—C18175.43 (16)
C8—C9—C10—O1167.00 (17)C10—C9—C11—C18−11.6 (3)
C11—C9—C10—O1−5.3 (3)N—C12—C11—C91.22 (18)
C8—C9—C10—C1−10.4 (2)C13—C12—C11—C9178.26 (17)
C11—C9—C10—C1177.31 (16)N—C12—C11—C18−175.55 (14)
C2—C1—C10—O17.4 (3)C13—C12—C11—C181.5 (3)
C6—C1—C10—O1−171.35 (17)O3—C18—C11—C9140.6 (2)
C2—C1—C10—C9−175.19 (16)C19—C18—C11—C9−43.8 (3)
C6—C1—C10—C96.0 (2)O3—C18—C11—C12−43.5 (3)
C16—N—C12—C130.5 (2)C19—C18—C11—C12132.13 (17)
C8—N—C12—C13−178.57 (14)C22—C23—C24—C19−2.1 (3)
C16—N—C12—C11178.02 (14)C20—C19—C24—C232.1 (3)
C8—N—C12—C11−1.00 (17)C18—C19—C24—C23179.74 (17)
N—C8—C7—O2−0.2 (3)N—C16—C15—C140.2 (3)
C9—C8—C7—O2176.99 (17)C13—C14—C15—C161.0 (3)
N—C8—C7—C6−179.40 (14)C17—C14—C15—C16−178.26 (18)
C9—C8—C7—C6−2.2 (2)C3—C4—C5—C6−0.7 (3)
C5—C6—C7—O2−0.6 (3)C1—C6—C5—C40.7 (3)
C1—C6—C7—O2178.29 (16)C7—C6—C5—C4179.60 (16)
C5—C6—C7—C8178.63 (15)C5—C4—C3—C2−0.4 (3)
C1—C6—C7—C8−2.5 (2)C1—C2—C3—C41.5 (3)
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