| Literature DB >> 21582436 |
Lubomír Svorc, Viktor Vrábel, Jozef Kožíšek, Stefan Marchalín, Peter Safář.
Abstract
In the mol-ecular structure of the title compound, C(10)H(11)NOS, the central six-membered ring of the indolizine unit adopts an envelope conformation, the maximum deviations from the mean plane of the ring being 0.533 (2) Å. The fused thieno ring is nearly coplanar [mean deviation = 0.007 (2) Å]. The conformation of the fused oxopyrrolidine ring is close to that of a flat-envelope, with a maximum deviation of 0.339 (3) Å. The crystal structure is stabilized by C-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21582436 PMCID: PMC2968850 DOI: 10.1107/S1600536809007405
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H11NOS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 12211 reflections | |
| θ = 3.3–29.4° | |
| µ = 0.31 mm−1 | |
| α = 84.180 (3)° | |
| β = 78.611 (2)° | Block, colourless |
| γ = 76.174 (3)° | 0.42 × 0.32 × 0.14 mm |
| Oxford Diffraction Gemini R CCD diffractometer | 2348 independent reflections |
| Radiation source: fine-focus sealed tube | 1918 reflections with |
| graphite | |
| Detector resolution: 10.4340 pixels mm-1 | θmax = 29.5°, θmin = 3.3° |
| Rotation method data acquisition using ω and φ scans | |
| Absorption correction: analytical (Clark & Reid, 1995) | |
| 20197 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2348 reflections | (Δ/σ)max < 0.001 |
| 118 parameters | Δρmax = 0.41 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Experimental. face-indexed ( |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C2 | 0.1565 (3) | 0.7697 (2) | 1.25520 (17) | 0.0449 (4) | |
| C3 | 0.2584 (3) | 0.6972 (2) | 1.39075 (18) | 0.0519 (4) | |
| H3B | 0.1863 | 0.6133 | 1.4449 | 0.062* | |
| H3A | 0.2485 | 0.7821 | 1.4588 | 0.062* | |
| C4 | 0.4980 (3) | 0.6222 (2) | 1.32515 (17) | 0.0482 (4) | |
| H4B | 0.5952 | 0.6373 | 1.3899 | 0.058* | |
| H4A | 0.5196 | 0.5054 | 1.3120 | 0.058* | |
| C5 | 0.5387 (2) | 0.7177 (2) | 1.17316 (16) | 0.0411 (3) | |
| H5A | 0.5841 | 0.8180 | 1.1880 | 0.049* | |
| C6 | 0.7046 (2) | 0.6242 (2) | 1.05152 (16) | 0.0437 (3) | |
| H6B | 0.8519 | 0.6205 | 1.0671 | 0.052* | |
| H6A | 0.6866 | 0.5118 | 1.0551 | 0.052* | |
| C7 | 0.6721 (2) | 0.70843 (18) | 0.90130 (16) | 0.0397 (3) | |
| C8 | 0.6992 (3) | 0.8129 (2) | 0.63501 (19) | 0.0548 (4) | |
| H8A | 0.7385 | 0.8395 | 0.5328 | 0.066* | |
| C9 | 0.4964 (3) | 0.8674 (2) | 0.71745 (17) | 0.0481 (4) | |
| H9A | 0.3807 | 0.9362 | 0.6779 | 0.058* | |
| C10 | 0.4802 (2) | 0.80769 (17) | 0.87139 (16) | 0.0370 (3) | |
| C11 | 0.2797 (2) | 0.84994 (19) | 0.99057 (16) | 0.0413 (3) | |
| H11B | 0.2413 | 0.9680 | 1.0020 | 0.050* | |
| H11A | 0.1577 | 0.8193 | 0.9603 | 0.050* | |
| N1 | 0.31810 (18) | 0.76400 (15) | 1.13355 (13) | 0.0369 (3) | |
| O1 | −0.03879 (19) | 0.82620 (19) | 1.25376 (15) | 0.0653 (4) | |
| S1 | 0.87330 (7) | 0.68901 (6) | 0.74263 (5) | 0.05585 (18) |
| C2 | 0.0358 (8) | 0.0559 (9) | 0.0399 (8) | −0.0084 (6) | −0.0014 (6) | −0.0036 (6) |
| C3 | 0.0459 (9) | 0.0707 (11) | 0.0334 (7) | −0.0092 (8) | 0.0004 (6) | −0.0006 (7) |
| C4 | 0.0413 (8) | 0.0636 (10) | 0.0350 (7) | −0.0049 (7) | −0.0079 (6) | 0.0042 (7) |
| C5 | 0.0320 (7) | 0.0511 (8) | 0.0376 (7) | −0.0046 (6) | −0.0068 (6) | −0.0004 (6) |
| C6 | 0.0346 (7) | 0.0518 (8) | 0.0373 (7) | 0.0008 (6) | −0.0045 (6) | 0.0026 (6) |
| C7 | 0.0367 (7) | 0.0445 (8) | 0.0326 (7) | −0.0041 (6) | −0.0008 (5) | −0.0010 (5) |
| C8 | 0.0668 (11) | 0.0585 (10) | 0.0321 (7) | −0.0093 (8) | −0.0013 (7) | 0.0036 (7) |
| C9 | 0.0583 (10) | 0.0458 (8) | 0.0356 (7) | −0.0038 (7) | −0.0100 (7) | 0.0035 (6) |
| C10 | 0.0392 (7) | 0.0362 (7) | 0.0335 (7) | −0.0055 (5) | −0.0056 (5) | −0.0007 (5) |
| C11 | 0.0356 (7) | 0.0445 (8) | 0.0385 (7) | −0.0007 (6) | −0.0070 (6) | 0.0028 (6) |
| N1 | 0.0290 (6) | 0.0456 (6) | 0.0328 (6) | −0.0039 (5) | −0.0047 (4) | 0.0009 (5) |
| O1 | 0.0320 (6) | 0.0977 (10) | 0.0558 (7) | −0.0034 (6) | 0.0003 (5) | 0.0010 (7) |
| S1 | 0.0463 (3) | 0.0700 (3) | 0.0387 (2) | −0.00116 (19) | 0.00624 (17) | −0.00050 (18) |
| C2—O1 | 1.2244 (19) | C6—H6B | 0.9700 |
| C2—N1 | 1.3494 (19) | C6—H6A | 0.9700 |
| C2—C3 | 1.509 (2) | C7—C10 | 1.364 (2) |
| C3—C4 | 1.531 (2) | C7—S1 | 1.7216 (15) |
| C3—H3B | 0.9700 | C8—C9 | 1.359 (3) |
| C3—H3A | 0.9700 | C8—S1 | 1.7127 (19) |
| C4—C5 | 1.530 (2) | C8—H8A | 0.9300 |
| C4—H4B | 0.9700 | C9—C10 | 1.4271 (19) |
| C4—H4A | 0.9700 | C9—H9A | 0.9300 |
| C5—N1 | 1.4730 (18) | C10—C11 | 1.4983 (19) |
| C5—C6 | 1.506 (2) | C11—N1 | 1.4530 (18) |
| C5—H5A | 0.9800 | C11—H11B | 0.9700 |
| C6—C7 | 1.498 (2) | C11—H11A | 0.9700 |
| O1—C2—N1 | 124.92 (15) | C5—C6—H6A | 109.9 |
| O1—C2—C3 | 126.64 (15) | H6B—C6—H6A | 108.3 |
| N1—C2—C3 | 108.44 (13) | C10—C7—C6 | 124.86 (13) |
| C2—C3—C4 | 104.44 (13) | C10—C7—S1 | 111.24 (11) |
| C2—C3—H3B | 110.9 | C6—C7—S1 | 123.89 (11) |
| C4—C3—H3B | 110.9 | C9—C8—S1 | 111.60 (12) |
| C2—C3—H3A | 110.9 | C9—C8—H8A | 124.2 |
| C4—C3—H3A | 110.9 | S1—C8—H8A | 124.2 |
| H3B—C3—H3A | 108.9 | C8—C9—C10 | 112.69 (15) |
| C5—C4—C3 | 103.88 (13) | C8—C9—H9A | 123.7 |
| C5—C4—H4B | 111.0 | C10—C9—H9A | 123.7 |
| C3—C4—H4B | 111.0 | C7—C10—C9 | 112.41 (14) |
| C5—C4—H4A | 111.0 | C7—C10—C11 | 122.46 (13) |
| C3—C4—H4A | 111.0 | C9—C10—C11 | 125.11 (13) |
| H4B—C4—H4A | 109.0 | N1—C11—C10 | 110.65 (12) |
| N1—C5—C6 | 111.65 (12) | N1—C11—H11B | 109.5 |
| N1—C5—C4 | 102.22 (12) | C10—C11—H11B | 109.5 |
| C6—C5—C4 | 115.73 (14) | N1—C11—H11A | 109.5 |
| N1—C5—H5A | 109.0 | C10—C11—H11A | 109.5 |
| C6—C5—H5A | 109.0 | H11B—C11—H11A | 108.1 |
| C4—C5—H5A | 109.0 | C2—N1—C11 | 122.02 (12) |
| C7—C6—C5 | 109.13 (12) | C2—N1—C5 | 112.77 (12) |
| C7—C6—H6B | 109.9 | C11—N1—C5 | 121.72 (12) |
| C5—C6—H6B | 109.9 | C8—S1—C7 | 92.04 (8) |
| C7—C6—H6A | 109.9 | ||
| O1—C2—C3—C4 | 171.40 (18) | C7—C10—C11—N1 | −3.3 (2) |
| N1—C2—C3—C4 | −9.31 (19) | C9—C10—C11—N1 | 178.30 (14) |
| C2—C3—C4—C5 | 23.40 (19) | O1—C2—N1—C11 | 10.3 (3) |
| C3—C4—C5—N1 | −28.18 (17) | C3—C2—N1—C11 | −168.98 (14) |
| C3—C4—C5—C6 | −149.74 (14) | O1—C2—N1—C5 | 169.56 (17) |
| N1—C5—C6—C7 | 44.61 (18) | C3—C2—N1—C5 | −9.74 (18) |
| C4—C5—C6—C7 | 160.97 (13) | C10—C11—N1—C2 | −173.84 (13) |
| C5—C6—C7—C10 | −24.2 (2) | C10—C11—N1—C5 | 28.76 (19) |
| C5—C6—C7—S1 | 156.95 (12) | C6—C5—N1—C2 | 148.74 (14) |
| S1—C8—C9—C10 | −0.2 (2) | C4—C5—N1—C2 | 24.42 (17) |
| C6—C7—C10—C9 | −178.47 (14) | C6—C5—N1—C11 | −51.94 (19) |
| S1—C7—C10—C9 | 0.54 (17) | C4—C5—N1—C11 | −176.27 (13) |
| C6—C7—C10—C11 | 2.9 (2) | C9—C8—S1—C7 | 0.39 (15) |
| S1—C7—C10—C11 | −178.07 (11) | C10—C7—S1—C8 | −0.53 (13) |
| C8—C9—C10—C7 | −0.3 (2) | C6—C7—S1—C8 | 178.49 (15) |
| C8—C9—C10—C11 | 178.31 (15) |
| H··· | ||||
| C9—H9A···O1i | 0.93 | 2.60 | 3.379 (2) | 142 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9 | 0.93 | 2.60 | 3.379 (2) | 142 |
Symmetry code: (i) .