Literature DB >> 23125742

l-Leucinium fluoride monohydrate.

Ouahida Zeghouan1, Lamia Bendjeddou, Aouatef Cherouana, Slimane Dahaoui, Claude Lecomte.   

Abstract

The asymmetric unit of the title hydrated salt, C(6)H(14)NO(2) (+)·F(-)·H(2)O, contains a discrete cation with a protonated amino group, a halide anion and one water mol-ecule. The crystal structure is composed of double layers parallel to (010) held together by N-H⋯O, N-H⋯F, O-H⋯F and C-H⋯F hydrogen bonds, forming a two-dimensional network, and stacked along the c axis, viz. hydro-philic layers at z = 0 and 1/2 and hydro-phobic layers at z = 1/3 and 2/3.

Entities:  

Year:  2012        PMID: 23125742      PMCID: PMC3470329          DOI: 10.1107/S1600536812039001

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For background to carb­oxy­lic acids, see: Miller & Orgel (1974 ▶); Kvenvolden et al. (1971 ▶). For our research on organic salts of amino acids, see: Guenifa et al. (2009 ▶); Moussa Slimane et al. (2009 ▶). For l-leucinium oxalate, see: Rajagopal et al. (2003 ▶) and for l-leucinium perchlorate, see: Janczak & Perpétuo (2007 ▶).

Experimental

Crystal data

C6H14NO2F−·H2O M = 169.20 Orthorhombic, a = 5.7058 (1) Å b = 5.8289 (1) Å c = 27.3150 (4) Å V = 908.46 (3) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 100 K 0.3 × 0.03 × 0.02 mm

Data collection

Oxford Diffraction Super Nova diffractometer with an Atlas detector 27972 measured reflections 2771 independent reflections 2584 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.078 S = 1.06 2771 reflections 118 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.14 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2008 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶), PARST97 (Nardelli, 1995 ▶), Mercury (Macrae et al., 2006 ▶) and POVRay (Persistence of Vision Team, 2004 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812039001/aa2065sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812039001/aa2065Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812039001/aa2065Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H14NO2+·F·H2OF(000) = 368
Mr = 169.20Dx = 1.237 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 27972 reflections
a = 5.7058 (1) Åθ = 3.6–30.5°
b = 5.8289 (1) ŵ = 0.11 mm1
c = 27.3150 (4) ÅT = 100 K
V = 908.46 (3) Å3Needle, colourless
Z = 40.3 × 0.03 × 0.02 mm
Oxford Diffraction Super Nova diffractometer with an Atlas detector2584 reflections with I > 2σ(I)
Radiation source: Enhance (Mo) X-ray SourceRint = 0.039
Graphite monochromatorθmax = 30.5°, θmin = 3.6°
Detector resolution: 10.4508 pixels mm-1h = −8→8
ω scansk = −8→8
27972 measured reflectionsl = −39→39
2771 independent reflections
Refinement on F27 restraints
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.030w = 1/[σ2(Fo2) + (0.045P)2 + 0.0976P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.078(Δ/σ)max = 0.001
S = 1.06Δρmax = 0.28 e Å3
2771 reflectionsΔρmin = −0.14 e Å3
118 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.01929 (10)0.16104 (10)0.56810 (2)0.01618 (13)
O1−0.18388 (14)1.11050 (12)0.38989 (3)0.01957 (16)
O1W0.35872 (12)0.05014 (12)0.50292 (3)0.01595 (15)
H1W0.248 (2)0.090 (2)0.5214 (4)0.024*
H2W0.404 (2)0.152 (2)0.4837 (4)0.024*
O2−0.16963 (15)0.93446 (14)0.46240 (3)0.02415 (18)
N10.20572 (15)0.68869 (14)0.44249 (3)0.01236 (15)
C20.10845 (16)0.82520 (16)0.40113 (3)0.01163 (16)
H20.22880.93190.38940.014*
C30.02982 (17)0.67306 (17)0.35844 (3)0.01419 (17)
H3B−0.04590.76940.33420.017*
H3A−0.08670.56580.37050.017*
C1−0.09782 (17)0.96280 (16)0.42137 (3)0.01297 (17)
C40.2246 (2)0.5363 (2)0.33310 (4)0.0212 (2)
H40.30180.43930.35760.025*
C50.1160 (2)0.38189 (19)0.29402 (4)0.0269 (2)
H5A0.23730.2960.2780.04*
H5C0.03510.47460.27040.04*
H5B0.00720.2780.30910.04*
C60.4082 (2)0.6941 (3)0.31019 (5)0.0349 (3)
H6A0.47460.79060.33510.052*
H6B0.33560.78770.28560.052*
H6C0.52970.60320.29550.052*
H1−0.294 (3)1.184 (3)0.4060 (7)0.052*
H2N0.317 (3)0.593 (3)0.4337 (6)0.042*
H1N0.090 (3)0.610 (3)0.4578 (6)0.042*
H3N0.263 (3)0.784 (3)0.4649 (5)0.042*
U11U22U33U12U13U23
F10.0160 (3)0.0144 (3)0.0181 (3)−0.0065 (2)0.0001 (2)0.0000 (2)
O10.0231 (4)0.0191 (3)0.0164 (3)0.0124 (3)0.0043 (3)0.0044 (3)
O1W0.0147 (3)0.0115 (3)0.0216 (3)0.0002 (3)0.0031 (3)0.0007 (3)
O20.0285 (4)0.0232 (4)0.0207 (4)0.0140 (3)0.0102 (3)0.0085 (3)
N10.0130 (4)0.0112 (3)0.0129 (3)0.0033 (3)0.0003 (3)0.0004 (3)
C20.0121 (4)0.0102 (3)0.0126 (4)0.0032 (3)0.0014 (3)0.0015 (3)
C30.0152 (4)0.0143 (4)0.0130 (4)0.0026 (4)−0.0006 (3)−0.0015 (3)
C10.0136 (4)0.0093 (4)0.0160 (4)0.0023 (3)0.0007 (3)−0.0001 (3)
C40.0251 (5)0.0235 (5)0.0149 (4)0.0123 (4)−0.0013 (4)−0.0040 (4)
C50.0398 (6)0.0215 (5)0.0193 (5)0.0034 (5)0.0028 (5)−0.0061 (4)
C60.0188 (5)0.0536 (8)0.0322 (6)−0.0022 (5)0.0076 (5)−0.0192 (6)
O1—C11.3121 (12)C4—C51.5276 (16)
O2—C11.2047 (12)C4—C61.5281 (18)
O1—H10.879 (18)C2—H20.9800
O1W—H1W0.841 (11)C3—H3B0.9700
O1W—H2W0.834 (11)C3—H3A0.9700
N1—C21.4891 (12)C4—H40.9800
N1—H2N0.879 (17)C5—H5B0.9600
N1—H3N0.889 (16)C5—H5C0.9600
N1—H1N0.906 (17)C5—H5A0.9600
C1—C21.5278 (13)C6—H6C0.9600
C2—C31.5321 (12)C6—H6A0.9600
C3—C41.5329 (15)C6—H6B0.9600
C1—O1—H1105.0 (12)C2—C3—H3A108.00
H1W—O1W—H2W114.5 (11)C2—C3—H3B108.00
H2N—N1—H3N108.6 (16)C4—C3—H3B108.00
H1N—N1—H3N105.5 (15)H3A—C3—H3B107.00
C2—N1—H1N110.4 (11)C4—C3—H3A108.00
C2—N1—H2N113.7 (11)C5—C4—H4109.00
C2—N1—H3N109.0 (10)C6—C4—H4109.00
H1N—N1—H2N109.4 (16)C3—C4—H4109.00
O1—C1—O2124.92 (9)C4—C5—H5A109.00
O2—C1—C2121.78 (8)C4—C5—H5B110.00
O1—C1—C2113.30 (7)H5A—C5—H5B109.00
N1—C2—C3112.16 (8)H5A—C5—H5C110.00
C1—C2—C3110.71 (7)C4—C5—H5C109.00
N1—C2—C1107.04 (7)H5B—C5—H5C109.00
C2—C3—C4115.62 (8)C4—C6—H6B109.00
C3—C4—C5109.14 (9)C4—C6—H6C110.00
C3—C4—C6111.65 (10)C4—C6—H6A109.00
C5—C4—C6110.28 (10)H6A—C6—H6C110.00
N1—C2—H2109.00H6B—C6—H6C109.00
C3—C2—H2109.00H6A—C6—H6B109.00
C1—C2—H2109.00
O1—C1—C2—N1172.87 (8)N1—C2—C3—C4−63.80 (10)
O1—C1—C2—C3−64.60 (10)C1—C2—C3—C4176.70 (8)
O2—C1—C2—N1−6.99 (12)C2—C3—C4—C5176.10 (8)
O2—C1—C2—C3115.54 (10)C2—C3—C4—C6−61.73 (11)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1Wi0.91 (2)1.94 (2)2.8428 (11)174 (2)
N1—H2N···F1ii0.879 (17)1.878 (17)2.7277 (10)162.1 (16)
N1—H3N···O1Wiii0.89 (2)1.95 (2)2.8152 (11)166 (2)
O1—H1···F1iv0.88 (2)1.57 (2)2.4410 (10)174 (2)
O1W—H1W···F10.84 (1)1.87 (1)2.7090 (9)174 (1)
O1W—H2W···F1ii0.83 (1)1.90 (1)2.7271 (9)170 (1)
C4—H4···F1ii0.982.453.3813 (12)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O1W i 0.91 (2)1.94 (2)2.8428 (11)174 (2)
N1—H2N⋯F1ii 0.879 (17)1.878 (17)2.7277 (10)162.1 (16)
N1—H3N⋯O1W iii 0.89 (2)1.95 (2)2.8152 (11)166 (2)
O1—H1⋯F1iv 0.88 (2)1.57 (2)2.4410 (10)174 (2)
O1W—H1W⋯F10.84 (1)1.87 (1)2.7090 (9)174 (1)
O1W—H2W⋯F1ii 0.83 (1)1.90 (1)2.7271 (9)170 (1)
C4—H4⋯F1ii 0.982.453.3813 (12)159

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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