Literature DB >> 22719547

Methyl 2-(thio-phene-2-carboxamido)-benzoate.

Durga Prasad Singh, Seema Pratap, Ray J Butcher, Sushil K Gupta.   

Abstract

The title compound, C(13)H(11)NO(3)S, was synthesized from methyl anthranilate, triethyl-amine and 2-thio-phenoyl chloride in benzene. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond. The dihedral angle between the rings is 2.74 (12)°. In the crystal, C-H⋯O inter-actions link neighbouring mol-ecules into a three-dimensional network.

Entities:  

Year:  2012        PMID: 22719547      PMCID: PMC3379349          DOI: 10.1107/S160053681202082X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Sladowska et al. (1980 ▶).

Experimental

Crystal data

C13H11NO3S M = 261.29 Orthorhombic, a = 19.2845 (4) Å b = 3.86753 (8) Å c = 15.6430 (3) Å V = 1166.71 (4) Å3 Z = 4 Cu Kα radiation μ = 2.48 mm−1 T = 123 K 0.45 × 0.18 × 0.04 mm

Data collection

Agilent Xcalibur Ruby Gemini diffractometer Absorption correction: analytical (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.573, T max = 0.908 2379 measured reflections 1422 independent reflections 1381 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.090 S = 1.04 1422 reflections 168 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.27 e Å−3 Absolute structure: Flack (1983 ▶), 206 Friedel pairs Flack parameter: −0.02 (2) Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S160053681202082X/bt5852sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681202082X/bt5852Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681202082X/bt5852Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11NO3SF(000) = 544
Mr = 261.29Dx = 1.488 Mg m3
Orthorhombic, Pca21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2c -2acCell parameters from 1440 reflections
a = 19.2845 (4) Åθ = 2.8–75.1°
b = 3.86753 (8) ŵ = 2.48 mm1
c = 15.6430 (3) ÅT = 123 K
V = 1166.71 (4) Å3Needle, colorless
Z = 40.45 × 0.18 × 0.04 mm
Agilent Xcalibur Ruby Gemini diffractometer1422 independent reflections
Radiation source: Enhance (Cu) X-ray Source1381 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 10.5081 pixels mm-1θmax = 75.2°, θmin = 4.6°
ω scansh = −15→23
Absorption correction: analytical (CrysAlis PRO; Agilent, 2012)k = −4→4
Tmin = 0.573, Tmax = 0.908l = −6→19
2379 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090w = 1/[σ2(Fo2) + (0.0597P)2 + 0.0898P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
1422 reflectionsΔρmax = 0.21 e Å3
168 parametersΔρmin = −0.27 e Å3
2 restraintsAbsolute structure: Flack (1983), 206 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.02 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.25886 (3)0.20133 (16)0.72770 (5)0.03006 (19)
O10.28253 (10)0.3657 (6)0.54680 (14)0.0304 (4)
O20.51080 (11)0.8922 (6)0.60945 (13)0.0339 (5)
O30.57519 (10)1.1406 (5)0.50816 (14)0.0308 (4)
N10.38872 (12)0.6290 (6)0.56315 (15)0.0252 (5)
H1B0.4151 (18)0.698 (9)0.603 (2)0.037 (10)*
C10.29286 (16)0.2186 (7)0.8287 (2)0.0307 (6)
H1A0.26940.13720.87810.037*
C20.35685 (16)0.3611 (8)0.8301 (2)0.0304 (6)
H2A0.38310.39190.88100.037*
C30.38110 (14)0.4607 (7)0.74725 (17)0.0249 (5)
H3A0.42510.56210.73640.030*
C40.33202 (13)0.3900 (7)0.68499 (18)0.0251 (5)
C50.33132 (14)0.4577 (7)0.59160 (18)0.0247 (6)
C60.40520 (13)0.7321 (7)0.4797 (2)0.0231 (5)
C70.36094 (14)0.6720 (7)0.41074 (19)0.0262 (6)
H7A0.31730.56420.42010.031*
C80.38002 (15)0.7678 (7)0.3290 (2)0.0279 (6)
H8A0.34980.71850.28260.034*
C90.44255 (15)0.9352 (7)0.31331 (18)0.0277 (6)
H9A0.45501.00100.25690.033*
C100.48604 (14)1.0039 (7)0.38091 (19)0.0261 (6)
H10A0.52841.12210.37080.031*
C110.46910 (13)0.9032 (7)0.46454 (18)0.0241 (6)
C120.51909 (14)0.9743 (7)0.53544 (18)0.0253 (5)
C130.62744 (16)1.2115 (9)0.5729 (2)0.0359 (7)
H13A0.66451.35250.54790.054*
H13B0.64690.99290.59370.054*
H13C0.60621.33670.62060.054*
U11U22U33U12U13U23
S10.0264 (3)0.0293 (3)0.0345 (4)−0.0023 (2)0.0046 (3)0.0010 (4)
O10.0248 (9)0.0361 (10)0.0303 (10)−0.0051 (8)−0.0037 (8)−0.0012 (9)
O20.0329 (10)0.0454 (11)0.0235 (10)−0.0104 (9)−0.0042 (9)0.0033 (10)
O30.0254 (9)0.0401 (11)0.0268 (9)−0.0077 (9)−0.0033 (9)0.0017 (9)
N10.0234 (10)0.0295 (11)0.0227 (11)−0.0024 (9)−0.0005 (9)−0.0013 (9)
C10.0342 (14)0.0284 (14)0.0294 (15)0.0026 (11)0.0072 (12)0.0021 (12)
C20.0341 (14)0.0299 (13)0.0272 (14)0.0021 (12)0.0037 (12)0.0013 (12)
C30.0281 (12)0.0242 (11)0.0224 (12)−0.0015 (10)0.0044 (11)0.0004 (10)
C40.0230 (12)0.0226 (12)0.0298 (14)0.0020 (10)0.0037 (11)0.0009 (10)
C50.0245 (12)0.0208 (12)0.0288 (14)0.0035 (10)0.0019 (11)0.0001 (10)
C60.0239 (13)0.0211 (11)0.0243 (12)0.0017 (9)0.0006 (11)−0.0002 (11)
C70.0232 (12)0.0263 (13)0.0290 (15)−0.0009 (10)−0.0042 (12)−0.0018 (11)
C80.0301 (13)0.0282 (12)0.0255 (14)0.0035 (11)−0.0094 (12)−0.0020 (11)
C90.0333 (13)0.0287 (14)0.0210 (12)0.0050 (11)0.0007 (11)0.0033 (11)
C100.0256 (12)0.0251 (13)0.0277 (14)0.0007 (11)0.0018 (11)0.0005 (10)
C110.0239 (12)0.0218 (11)0.0267 (14)0.0028 (10)−0.0032 (11)−0.0021 (11)
C120.0240 (12)0.0260 (12)0.0258 (13)0.0006 (10)−0.0017 (10)−0.0011 (10)
C130.0292 (14)0.0416 (17)0.0370 (16)−0.0082 (12)−0.0090 (14)0.0002 (15)
S1—C11.711 (3)C4—C51.484 (4)
S1—C41.723 (3)C6—C71.395 (4)
O1—C51.226 (3)C6—C111.419 (3)
O2—C121.211 (4)C7—C81.381 (4)
O3—C121.329 (3)C7—H7A0.9500
O3—C131.454 (4)C8—C91.390 (4)
N1—C51.365 (4)C8—H8A0.9500
N1—C61.401 (4)C9—C101.375 (4)
N1—H1B0.852 (19)C9—H9A0.9500
C1—C21.352 (4)C10—C111.404 (4)
C1—H1A0.9500C10—H10A0.9500
C2—C31.431 (4)C11—C121.495 (4)
C2—H2A0.9500C13—H13A0.9800
C3—C41.385 (4)C13—H13B0.9800
C3—H3A0.9500C13—H13C0.9800
C1—S1—C491.59 (15)C8—C7—H7A119.7
C12—O3—C13115.6 (3)C6—C7—H7A119.7
C5—N1—C6128.7 (2)C7—C8—C9121.3 (3)
C5—N1—H1B113 (3)C7—C8—H8A119.4
C6—N1—H1B117 (3)C9—C8—H8A119.4
C2—C1—S1112.4 (2)C10—C9—C8118.9 (3)
C2—C1—H1A123.8C10—C9—H9A120.6
S1—C1—H1A123.8C8—C9—H9A120.6
C1—C2—C3113.2 (3)C9—C10—C11121.4 (2)
C1—C2—H2A123.4C9—C10—H10A119.3
C3—C2—H2A123.4C11—C10—H10A119.3
C4—C3—C2111.1 (2)C10—C11—C6119.2 (2)
C4—C3—H3A124.4C10—C11—C12119.4 (2)
C2—C3—H3A124.4C6—C11—C12121.4 (3)
C3—C4—C5131.5 (2)O2—C12—O3122.8 (3)
C3—C4—S1111.7 (2)O2—C12—C11125.2 (3)
C5—C4—S1116.7 (2)O3—C12—C11112.1 (2)
O1—C5—N1125.2 (3)O3—C13—H13A109.5
O1—C5—C4121.2 (3)O3—C13—H13B109.5
N1—C5—C4113.5 (2)H13A—C13—H13B109.5
C7—C6—N1122.3 (2)O3—C13—H13C109.5
C7—C6—C11118.6 (3)H13A—C13—H13C109.5
N1—C6—C11119.1 (3)H13B—C13—H13C109.5
C8—C7—C6120.6 (3)
C4—S1—C1—C20.0 (2)C11—C6—C7—C82.0 (4)
S1—C1—C2—C3−0.5 (3)C6—C7—C8—C9−1.9 (4)
C1—C2—C3—C40.8 (4)C7—C8—C9—C100.3 (4)
C2—C3—C4—C5177.1 (3)C8—C9—C10—C111.2 (4)
C2—C3—C4—S1−0.8 (3)C9—C10—C11—C6−1.1 (4)
C1—S1—C4—C30.4 (2)C9—C10—C11—C12178.1 (2)
C1—S1—C4—C5−177.8 (2)C7—C6—C11—C10−0.5 (4)
C6—N1—C5—O1−0.8 (5)N1—C6—C11—C10179.4 (3)
C6—N1—C5—C4179.6 (2)C7—C6—C11—C12−179.7 (2)
C3—C4—C5—O1178.3 (3)N1—C6—C11—C120.2 (4)
S1—C4—C5—O1−3.9 (4)C13—O3—C12—O21.5 (4)
C3—C4—C5—N1−2.1 (4)C13—O3—C12—C11−178.4 (2)
S1—C4—C5—N1175.66 (19)C10—C11—C12—O2−178.1 (3)
C5—N1—C6—C71.1 (4)C6—C11—C12—O21.0 (4)
C5—N1—C6—C11−178.8 (3)C10—C11—C12—O31.7 (4)
N1—C6—C7—C8−177.9 (3)C6—C11—C12—O3−179.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1B···O20.85 (2)1.99 (3)2.665 (3)135 (4)
C9—H9A···O2i0.952.433.380 (3)174
C13—H13A···O1ii0.982.523.433 (4)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1B⋯O20.85 (2)1.99 (3)2.665 (3)135 (4)
C9—H9A⋯O2i0.952.433.380 (3)174
C13—H13A⋯O1ii0.982.523.433 (4)154

Symmetry codes: (i) ; (ii) .

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