Literature DB >> 21203269

1-(4-Acetyl-phen-yl)-3-butyrylthio-urea.

Sohail Saeed, Moazzam Hussain Bhatti, Uzma Yunus, Peter G Jones.   

Abstract

The title compound, C(13)H(16)N(2)O(2)S, crystallizes in the thio-amide form with an intra-molecular hydrogen bond of type N-H⋯O(butyr-yl). Mol-ecules are linked into chains parallel to [10] by a further hydrogen bond of type N-H⋯O(acet-yl). C-H⋯O and C-H⋯S hydrogen bonds are also present.

Entities:  

Year:  2008        PMID: 21203269      PMCID: PMC2962175          DOI: 10.1107/S1600536808022095

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: D’hooghe et al. (2005 ▶); Glasser & Doughty (1964 ▶); Huebner et al. (1953 ▶); Jain & Rao (2003 ▶); Morales et al. (2000 ▶); Ru et al. (1994 ▶); Xu et al. (2004 ▶); Xue et al. (2003 ▶); Zeng et al. (2003 ▶); Zheng et al. (2004 ▶); Douglas & Dains (1934 ▶).

Experimental

Crystal data

C13H16N2O2S M = 264.34 Triclinic, a = 7.5111 (5) Å b = 9.7585 (8) Å c = 10.5036 (5) Å α = 65.283 (5)° β = 76.245 (4)° γ = 68.589 (5)° V = 647.78 (8) Å3 Z = 2 Mo Kα radiation μ = 0.25 mm−1 T = 100 (2) K 0.35 × 0.20 × 0.10 mm

Data collection

Oxford Diffraction Xcalibur S diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008 ▶) T min = 0.940, T max = 0.976 22401 measured reflections 3613 independent reflections 3036 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.087 S = 1.06 3613 reflections 173 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2008 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Siemens, 1994 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808022095/pk2104sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022095/pk2104Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H16N2O2SZ = 2
Mr = 264.34F000 = 280
Triclinic, P1Dx = 1.355 Mg m3
Hall symbol: -P 1Melting point: 458 K
a = 7.5111 (5) ÅMo Kα radiation λ = 0.71073 Å
b = 9.7585 (8) ÅCell parameters from 13985 reflections
c = 10.5036 (5) Åθ = 2.6–30.6º
α = 65.283 (5)ºµ = 0.25 mm1
β = 76.245 (4)ºT = 100 (2) K
γ = 68.589 (5)ºTablet, pale yellow
V = 647.78 (8) Å30.35 × 0.20 × 0.10 mm
Oxford Diffraction Xcalibur S diffractometer3613 independent reflections
Radiation source: Enhance (Mo) X-ray Source3036 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.030
Detector resolution: 16 pixels mm-1θmax = 30.7º
T = 100(2) Kθmin = 2.6º
ω scansh = −10→10
Absorption correction: multi-scan(CrysAlis RED; Oxford Diffraction, 2008)k = −13→13
Tmin = 0.940, Tmax = 0.976l = −15→15
22401 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.087  w = 1/[σ2(Fo2) + (0.0536P)2 + 0.0789P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.003
3613 reflectionsΔρmax = 0.45 e Å3
173 parametersΔρmin = −0.22 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.29224 (4)0.76793 (3)0.30824 (3)0.01606 (9)
O10.44460 (12)0.23350 (9)0.43763 (8)0.01882 (17)
O21.01149 (11)0.57384 (9)−0.32905 (8)0.01832 (17)
N10.30196 (13)0.47376 (10)0.46308 (9)0.01281 (18)
H010.223 (2)0.5166 (17)0.5163 (15)0.020 (3)*
N20.50761 (13)0.49957 (11)0.26018 (9)0.01395 (18)
H020.522 (2)0.4018 (19)0.2950 (17)0.032 (4)*
C10.19337 (17)0.00779 (13)0.85964 (12)0.0201 (2)
H1A0.20030.06300.91690.030*
H1B0.2504−0.10640.90660.030*
H1C0.05870.03020.84820.030*
C20.30349 (17)0.06471 (12)0.71538 (12)0.0192 (2)
H2A0.44160.03430.72610.023*
H2B0.29070.01340.65560.023*
C30.22642 (15)0.24316 (12)0.64468 (11)0.0149 (2)
H3A0.09090.27120.62850.018*
H3B0.22810.29250.70960.018*
C40.33675 (14)0.31196 (12)0.50663 (11)0.0134 (2)
C50.37498 (14)0.57496 (12)0.33954 (10)0.01180 (19)
C60.60770 (14)0.55630 (12)0.12737 (10)0.01210 (19)
C70.70848 (15)0.44211 (12)0.06708 (11)0.0145 (2)
H70.70640.33590.11710.017*
C80.81080 (15)0.48184 (12)−0.06408 (11)0.0145 (2)
H80.87750.4033−0.10390.017*
C90.81661 (14)0.63750 (12)−0.13858 (11)0.0126 (2)
C100.71839 (15)0.74982 (12)−0.07705 (11)0.0148 (2)
H100.72270.8555−0.12640.018*
C110.61396 (15)0.71148 (12)0.05482 (11)0.0148 (2)
H110.54780.79000.09490.018*
C120.92871 (14)0.67675 (12)−0.27915 (11)0.0143 (2)
C130.93843 (19)0.84247 (14)−0.35931 (12)0.0241 (3)
H13A1.02700.8463−0.44510.036*
H13B0.98450.8759−0.30050.036*
H13C0.81020.9136−0.38480.036*
U11U22U33U12U13U23
S0.01598 (13)0.01249 (13)0.01624 (14)−0.00382 (9)0.00445 (9)−0.00563 (10)
O10.0236 (4)0.0161 (4)0.0159 (4)−0.0068 (3)0.0050 (3)−0.0081 (3)
O20.0209 (4)0.0178 (4)0.0143 (4)−0.0047 (3)0.0052 (3)−0.0086 (3)
N10.0140 (4)0.0132 (4)0.0103 (4)−0.0044 (3)0.0036 (3)−0.0058 (3)
N20.0168 (4)0.0127 (4)0.0110 (4)−0.0054 (3)0.0035 (3)−0.0050 (3)
C10.0255 (5)0.0160 (5)0.0161 (5)−0.0089 (4)0.0005 (4)−0.0023 (4)
C20.0232 (5)0.0127 (5)0.0181 (5)−0.0055 (4)0.0031 (4)−0.0050 (4)
C30.0153 (5)0.0142 (5)0.0127 (5)−0.0054 (4)0.0024 (4)−0.0037 (4)
C40.0137 (4)0.0148 (5)0.0120 (5)−0.0052 (4)−0.0007 (4)−0.0048 (4)
C50.0112 (4)0.0149 (5)0.0100 (5)−0.0049 (3)−0.0002 (3)−0.0048 (4)
C60.0117 (4)0.0153 (5)0.0095 (4)−0.0050 (4)0.0010 (3)−0.0051 (4)
C70.0163 (5)0.0132 (5)0.0138 (5)−0.0052 (4)0.0017 (4)−0.0059 (4)
C80.0148 (4)0.0148 (5)0.0139 (5)−0.0041 (4)0.0013 (4)−0.0072 (4)
C90.0124 (4)0.0155 (5)0.0099 (5)−0.0043 (4)0.0001 (4)−0.0051 (4)
C100.0171 (5)0.0139 (5)0.0126 (5)−0.0054 (4)0.0017 (4)−0.0052 (4)
C110.0172 (5)0.0141 (5)0.0131 (5)−0.0044 (4)0.0024 (4)−0.0073 (4)
C120.0143 (4)0.0165 (5)0.0112 (5)−0.0048 (4)0.0008 (4)−0.0054 (4)
C130.0345 (6)0.0192 (5)0.0167 (5)−0.0126 (5)0.0104 (5)−0.0077 (4)
S—C51.6629 (11)C12—C131.4993 (15)
O1—C41.2246 (13)N1—H010.835 (16)
O2—C121.2243 (13)N2—H020.840 (16)
N1—C41.3864 (13)C1—H1A0.9800
N1—C51.3948 (12)C1—H1B0.9800
N2—C51.3458 (13)C1—H1C0.9800
N2—C61.4061 (12)C2—H2A0.9900
C1—C21.5245 (15)C2—H2B0.9900
C2—C31.5185 (14)C3—H3A0.9900
C3—C41.5036 (14)C3—H3B0.9900
C6—C111.3949 (14)C7—H70.9500
C6—C71.4008 (14)C8—H80.9500
C7—C81.3807 (14)C10—H100.9500
C8—C91.3999 (14)C11—H110.9500
C9—C101.3923 (14)C13—H13A0.9800
C9—C121.4856 (14)C13—H13B0.9800
C10—C111.3921 (14)C13—H13C0.9800
C4—N1—C5128.62 (9)H1A—C1—H1B109.5
C5—N2—C6131.77 (9)C2—C1—H1C109.5
C3—C2—C1110.45 (9)H1A—C1—H1C109.5
C4—C3—C2114.32 (8)H1B—C1—H1C109.5
O1—C4—N1122.98 (9)C3—C2—H2A109.6
O1—C4—C3123.40 (9)C1—C2—H2A109.6
N1—C4—C3113.60 (9)C3—C2—H2B109.6
N2—C5—N1113.62 (9)C1—C2—H2B109.6
N2—C5—S128.35 (8)H2A—C2—H2B108.1
N1—C5—S118.03 (7)C4—C3—H3A108.7
C11—C6—C7119.43 (9)C2—C3—H3A108.7
C11—C6—N2125.91 (9)C4—C3—H3B108.7
C7—C6—N2114.66 (9)C2—C3—H3B108.7
C8—C7—C6120.86 (9)H3A—C3—H3B107.6
C7—C8—C9120.25 (10)C8—C7—H7119.6
C10—C9—C8118.54 (9)C6—C7—H7119.6
C10—C9—C12122.35 (9)C7—C8—H8119.9
C8—C9—C12119.11 (9)C9—C8—H8119.9
C11—C10—C9121.78 (9)C11—C10—H10119.1
C10—C11—C6119.12 (9)C9—C10—H10119.1
O2—C12—C9119.80 (9)C10—C11—H11120.4
O2—C12—C13120.49 (9)C6—C11—H11120.4
C9—C12—C13119.71 (9)C12—C13—H13A109.5
C4—N1—H01115.4 (10)C12—C13—H13B109.5
C5—N1—H01115.9 (10)H13A—C13—H13B109.5
C5—N2—H02111.5 (11)C12—C13—H13C109.5
C6—N2—H02116.4 (11)H13A—C13—H13C109.5
C2—C1—H1A109.5H13B—C13—H13C109.5
C2—C1—H1B109.5
C1—C2—C3—C4175.26 (9)C6—C7—C8—C90.55 (16)
C5—N1—C4—O10.85 (17)C7—C8—C9—C100.39 (15)
C5—N1—C4—C3−177.92 (9)C7—C8—C9—C12179.66 (9)
C2—C3—C4—O118.45 (15)C8—C9—C10—C11−0.70 (16)
C2—C3—C4—N1−162.79 (9)C12—C9—C10—C11−179.95 (10)
C6—N2—C5—N1176.36 (10)C9—C10—C11—C60.07 (16)
C6—N2—C5—S−3.91 (17)C7—C6—C11—C100.87 (15)
C4—N1—C5—N2−5.70 (15)N2—C6—C11—C10−179.38 (10)
C4—N1—C5—S174.53 (8)C10—C9—C12—O2−179.50 (10)
C5—N2—C6—C1111.68 (18)C8—C9—C12—O21.26 (15)
C5—N2—C6—C7−168.56 (11)C10—C9—C12—C130.06 (16)
C11—C6—C7—C8−1.19 (16)C8—C9—C12—C13−179.18 (10)
N2—C6—C7—C8179.03 (9)
D—H···AD—HH···AD···AD—H···A
N2—H02···O10.840 (16)1.874 (16)2.6211 (12)147.4 (16)
N1—H01···O2i0.835 (16)2.087 (16)2.9057 (12)166.7 (13)
C3—H3B···O2i0.992.543.1345 (13)118
C1—H1C···Sii0.983.013.8996 (13)151
C3—H3A···Sii0.992.923.8444 (11)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H02⋯O10.840 (16)1.874 (16)2.6211 (12)147.4 (16)
N1—H01⋯O2i0.835 (16)2.087 (16)2.9057 (12)166.7 (13)
C3—H3B⋯O2i0.992.543.1345 (13)118
C1—H1C⋯Sii0.983.013.8996 (13)151
C3—H3A⋯Sii0.992.923.8444 (11)155

Symmetry codes: (i) ; (ii) .

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