Literature DB >> 23066171

REGULARIZATION FOR COX'S PROPORTIONAL HAZARDS MODEL WITH NP-DIMENSIONALITY.

Jelena Bradic1, Jianqing Fan, Jiancheng Jiang.   

Abstract

High throughput genetic sequencing arrays with thousands of measurements per sample and a great amount of related censored clinical data have increased demanding need for better measurement specific model selection. In this paper we establish strong oracle properties of non-concave penalized methods for non-polynomial (NP) dimensional data with censoring in the framework of Cox's proportional hazards model. A class of folded-concave penalties are employed and both LASSO and SCAD are discussed specifically. We unveil the question under which dimensionality and correlation restrictions can an oracle estimator be constructed and grasped. It is demonstrated that non-concave penalties lead to significant reduction of the "irrepresentable condition" needed for LASSO model selection consistency. The large deviation result for martingales, bearing interests of its own, is developed for characterizing the strong oracle property. Moreover, the non-concave regularized estimator, is shown to achieve asymptotically the information bound of the oracle estimator. A coordinate-wise algorithm is developed for finding the grid of solution paths for penalized hazard regression problems, and its performance is evaluated on simulated and gene association study examples.

Entities:  

Year:  2011        PMID: 23066171      PMCID: PMC3468162          DOI: 10.1214/11-AOS911

Source DB:  PubMed          Journal:  Ann Stat        ISSN: 0090-5364            Impact factor:   4.028


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7.  REGULARIZATION FOR COX'S PROPORTIONAL HAZARDS MODEL WITH NP-DIMENSIONALITY.

Authors:  Jelena Bradic; Jianqing Fan; Jiancheng Jiang
Journal:  Ann Stat       Date:  2011       Impact factor: 4.028

8.  Univariate shrinkage in the cox model for high dimensional data.

Authors:  Robert J Tibshirani
Journal:  Stat Appl Genet Mol Biol       Date:  2009-04-14

9.  Prediction of survival in follicular lymphoma based on molecular features of tumor-infiltrating immune cells.

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9.  Time-varying Hazards Model for Incorporating Irregularly Measured, High-Dimensional Biomarkers.

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10.  REGULARIZATION FOR COX'S PROPORTIONAL HAZARDS MODEL WITH NP-DIMENSIONALITY.

Authors:  Jelena Bradic; Jianqing Fan; Jiancheng Jiang
Journal:  Ann Stat       Date:  2011       Impact factor: 4.028

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