Literature DB >> 9044528

The lasso method for variable selection in the Cox model.

R Tibshirani1.   

Abstract

I propose a new method for variable selection and shrinkage in Cox's proportional hazards model. My proposal minimizes the log partial likelihood subject to the sum of the absolute values of the parameters being bounded by a constant. Because of the nature of this constraint, it shrinks coefficients and produces some coefficients that are exactly zero. As a result it reduces the estimation variance while providing an interpretable final model. The method is a variation of the 'lasso' proposal of Tibshirani, designed for the linear regression context. Simulations indicate that the lasso can be more accurate than stepwise selection in this setting.

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Year:  1997        PMID: 9044528     DOI: 10.1002/(sici)1097-0258(19970228)16:4<385::aid-sim380>3.0.co;2-3

Source DB:  PubMed          Journal:  Stat Med        ISSN: 0277-6715            Impact factor:   2.373


  1068 in total

1.  Lasso regularization for left-censored Gaussian outcome and high-dimensional predictors.

Authors:  Perrine Soret; Marta Avalos; Linda Wittkop; Daniel Commenges; Rodolphe Thiébaut
Journal:  BMC Med Res Methodol       Date:  2018-12-04       Impact factor: 4.615

2.  Principled sure independence screening for Cox models with ultra-high-dimensional covariates.

Authors:  Sihai Dave Zhao; Yi Li
Journal:  J Multivar Anal       Date:  2012-02-01       Impact factor: 1.473

3.  HIV-specific CD4 T cell responses to different viral proteins have discordant associations with viral load and clinical outcome.

Authors:  Srinika Ranasinghe; Michael Flanders; Sam Cutler; Damien Z Soghoian; Musie Ghebremichael; Isaiah Davis; Madelene Lindqvist; Florencia Pereyra; Bruce D Walker; David Heckerman; Hendrik Streeck
Journal:  J Virol       Date:  2011-10-26       Impact factor: 5.103

4.  An L₁-regularized logistic model for detecting short-term neuronal interactions.

Authors:  Mengyuan Zhao; Aaron Batista; John P Cunningham; Cynthia Chestek; Zuley Rivera-Alvidrez; Rachel Kalmar; Stephen Ryu; Krishna Shenoy; Satish Iyengar
Journal:  J Comput Neurosci       Date:  2011-10-22       Impact factor: 1.621

5.  Genetic, physiological, and lifestyle predictors of mortality in the general population.

Authors:  Stefan Walter; Johan Mackenbach; Zoltán Vokó; Stefan Lhachimi; M Arfan Ikram; André G Uitterlinden; Anne B Newman; Joanne M Murabito; Melissa E Garcia; Vilmundur Gudnason; Toshiko Tanaka; Gregory J Tranah; Henri Wallaschofski; Thomas Kocher; Lenore J Launer; Nora Franceschini; Maarten Schipper; Albert Hofman; Henning Tiemeier
Journal:  Am J Public Health       Date:  2012-02-16       Impact factor: 9.308

6.  Temporal Prediction of Future State Occupation in a Multistate Model from High-Dimensional Baseline Covariates via Pseudo-Value Regression.

Authors:  Sandipan Dutta; Susmita Datta; Somnath Datta
Journal:  J Stat Comput Simul       Date:  2016-12-20       Impact factor: 1.424

7.  Integrated Analysis of RNA and DNA from the Phase III Trial CALGB 40601 Identifies Predictors of Response to Trastuzumab-Based Neoadjuvant Chemotherapy in HER2-Positive Breast Cancer.

Authors:  Maki Tanioka; Cheng Fan; Joel S Parker; Katherine A Hoadley; Zhiyuan Hu; Yan Li; Terry M Hyslop; Brandelyn N Pitcher; Matthew G Soloway; Patricia A Spears; Lynn N Henry; Sara Tolaney; Chau T Dang; Ian E Krop; Lyndsay N Harris; Donald A Berry; Elaine R Mardis; Eric P Winer; Clifford A Hudis; Lisa A Carey; Charles M Perou
Journal:  Clin Cancer Res       Date:  2018-07-23       Impact factor: 12.531

8.  The TEACHH model to predict life expectancy in patients presenting for palliative spine radiotherapy: external validation and comparison with alternate models.

Authors:  Maryam Dosani; Scott Tyldesley; Brendan Bakos; Jeremy Hamm; Tim Kong; Sarah Lucas; Jordan Wong; Mitchell Liu; Sarah Hamilton
Journal:  Support Care Cancer       Date:  2018-02-01       Impact factor: 3.603

9.  A LASSO Method to Identify Protein Signature Predicting Post-transplant Renal Graft Survival.

Authors:  Ling Zhou; Lu Tang; Angela T Song; Diane M Cibrik; Peter X-K Song
Journal:  Stat Biosci       Date:  2016-10-03

10.  Variation in Variables that Predict Progression from MCI to AD Dementia over Duration of Follow-up.

Authors:  Shanshan Li; Ozioma Okonkwo; Marilyn Albert; Mei-Cheng Wang
Journal:  Am J Alzheimers Dis (Columbia)       Date:  2013
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