Literature DB >> 22932901

Biochemical analysis of the interactions between the proteins involved in the [FeFe]-hydrogenase maturation process.

Francesca Vallese1, Paola Berto, Maria Ruzzene, Laura Cendron, Stefania Sarno, Edith De Rosa, Giorgio M Giacometti, Paola Costantini.   

Abstract

[FeFe]-hydrogenases are iron-sulfur proteins characterized by a complex active site, the H-cluster, whose assembly requires three conserved maturases. HydE and HydG are radical S-adenosylmethionine enzymes that chemically modify a H-cluster precursor on HydF, a GTPase with a dual role of scaffold on which this precursor is synthesized, and carrier to transfer it to the hydrogenase. Coordinate structural and functional relationships between HydF and the two other maturases are crucial for the H-cluster assembly. However, to date only qualitative analysis of this protein network have been provided. In this work we showed that the interactions of HydE and HydG with HydF are distinct events, likely occurring in a precise functional order driven by different kinetic properties, independently of the HydF GTPase activity, which is instead involved in the dissociation of the maturases from the scaffold. We also found that HydF is able to interact with the hydrogenase only when co-expressed with the two other maturases, indicating that under these conditions it harbors per se all the structural elements needed to transfer the H-cluster precursor, thus completing the maturation process. These results open new working perspectives aimed at improving the knowledge of how these complex metalloenzymes are biosynthesized.

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Year:  2012        PMID: 22932901      PMCID: PMC3476321          DOI: 10.1074/jbc.M112.388900

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

1.  Crystal structure of HydF scaffold protein provides insights into [FeFe]-hydrogenase maturation.

Authors:  Laura Cendron; Paola Berto; Sarah D'Adamo; Francesca Vallese; Chiara Govoni; Matthew C Posewitz; Giorgio M Giacometti; Paola Costantini; Giuseppe Zanotti
Journal:  J Biol Chem       Date:  2011-11-04       Impact factor: 5.157

Review 2.  Radical AdoMet enzymes in complex metal cluster biosynthesis.

Authors:  Benjamin R Duffus; Trinity L Hamilton; Eric M Shepard; Eric S Boyd; John W Peters; Joan B Broderick
Journal:  Biochim Biophys Acta       Date:  2012-01-14

Review 3.  Emerging paradigms for complex iron-sulfur cofactor assembly and insertion.

Authors:  John W Peters; Joan B Broderick
Journal:  Annu Rev Biochem       Date:  2012-04-05       Impact factor: 23.643

Review 4.  Structure-function relationships in [FeFe]-hydrogenase active site maturation.

Authors:  Yvain Nicolet; Juan C Fontecilla-Camps
Journal:  J Biol Chem       Date:  2012-03-02       Impact factor: 5.157

5.  Experimental design for kinetic analysis of protein-protein interactions with surface plasmon resonance biosensors.

Authors:  R Karlsson; A Fält
Journal:  J Immunol Methods       Date:  1997-01-15       Impact factor: 2.303

Review 6.  Iron-sulfur clusters: nature's modular, multipurpose structures.

Authors:  H Beinert; R H Holm; E Münck
Journal:  Science       Date:  1997-08-01       Impact factor: 47.728

7.  [FeFe]-hydrogenase maturation: HydG-catalyzed synthesis of carbon monoxide.

Authors:  Eric M Shepard; Benjamin R Duffus; Simon J George; Shawn E McGlynn; Martin R Challand; Kevin D Swanson; Peter L Roach; Stephen P Cramer; John W Peters; Joan B Broderick
Journal:  J Am Chem Soc       Date:  2010-07-14       Impact factor: 15.419

8.  Hematopoietic lineage cell specific protein 1 associates with and down-regulates protein kinase CK2.

Authors:  M Ruzzene; A M Brunati; S Sarno; A Donella-Deana; L A Pinna
Journal:  FEBS Lett       Date:  1999-11-12       Impact factor: 4.124

9.  Synthesis of the 2Fe subcluster of the [FeFe]-hydrogenase H cluster on the HydF scaffold.

Authors:  Eric M Shepard; Shawn E McGlynn; Alexandra L Bueling; Celestine S Grady-Smith; Simon J George; Mark A Winslow; Stephen P Cramer; John W Peters; Joan B Broderick
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-24       Impact factor: 11.205

10.  Discovery of two novel radical S-adenosylmethionine proteins required for the assembly of an active [Fe] hydrogenase.

Authors:  Matthew C Posewitz; Paul W King; Sharon L Smolinski; Liping Zhang; Michael Seibert; Maria L Ghirardi
Journal:  J Biol Chem       Date:  2004-04-13       Impact factor: 5.157

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  16 in total

Review 1.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

2.  A Redox Active [2Fe-2S] Cluster on the Hydrogenase Maturase HydF.

Authors:  Eric M Shepard; Amanda S Byer; Jeremiah N Betz; John W Peters; Joan B Broderick
Journal:  Biochemistry       Date:  2016-06-14       Impact factor: 3.162

3.  Structural and functional characterization of the hydrogenase-maturation HydF protein.

Authors:  Giorgio Caserta; Ludovic Pecqueur; Agnieszka Adamska-Venkatesh; Cecilia Papini; Souvik Roy; Vincent Artero; Mohamed Atta; Edward Reijerse; Wolfgang Lubitz; Marc Fontecave
Journal:  Nat Chem Biol       Date:  2017-05-29       Impact factor: 15.040

Review 4.  Radical S-adenosyl-L-methionine chemistry in the synthesis of hydrogenase and nitrogenase metal cofactors.

Authors:  Amanda S Byer; Eric M Shepard; John W Peters; Joan B Broderick
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

5.  [FeFe]-hydrogenase maturation: insights into the role HydE plays in dithiomethylamine biosynthesis.

Authors:  Jeremiah N Betz; Nicholas W Boswell; Corey J Fugate; Gemma L Holliday; Eyal Akiva; Anna G Scott; Patricia C Babbitt; John W Peters; Eric M Shepard; Joan B Broderick
Journal:  Biochemistry       Date:  2015-03-02       Impact factor: 3.162

6.  Cysteine as a ligand platform in the biosynthesis of the FeFe hydrogenase H cluster.

Authors:  Daniel L M Suess; Ingmar Bürstel; Liliana De La Paz; Jon M Kuchenreuther; Cindy C Pham; Stephen P Cramer; James R Swartz; R David Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

7.  Identification of global ferredoxin interaction networks in Chlamydomonas reinhardtii.

Authors:  Erin A Peden; Marko Boehm; David W Mulder; Reanna Davis; William M Old; Paul W King; Maria L Ghirardi; Alexandra Dubini
Journal:  J Biol Chem       Date:  2013-10-07       Impact factor: 5.157

8.  H-cluster assembly intermediates built on HydF by the radical SAM enzymes HydE and HydG.

Authors:  Amanda S Byer; Eric M Shepard; Michael W Ratzloff; Jeremiah N Betz; Paul W King; William E Broderick; Joan B Broderick
Journal:  J Biol Inorg Chem       Date:  2019-09-06       Impact factor: 3.358

Review 9.  H-cluster assembly during maturation of the [FeFe]-hydrogenase.

Authors:  Joan B Broderick; Amanda S Byer; Kaitlin S Duschene; Benjamin R Duffus; Jeremiah N Betz; Eric M Shepard; John W Peters
Journal:  J Biol Inorg Chem       Date:  2014-06-28       Impact factor: 3.358

10.  EPR Spectroscopic Studies of [FeFe]-Hydrogenase Maturation.

Authors:  Daniel L M Suess; R David Britt
Journal:  Catal Letters       Date:  2015-07-30       Impact factor: 3.186

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