Literature DB >> 25477518

Radical S-adenosyl-L-methionine chemistry in the synthesis of hydrogenase and nitrogenase metal cofactors.

Amanda S Byer1, Eric M Shepard1, John W Peters1, Joan B Broderick2.   

Abstract

Nitrogenase, [FeFe]-hydrogenase, and [Fe]-hydrogenase enzymes perform catalysis at metal cofactors with biologically unusual non-protein ligands. The FeMo cofactor of nitrogenase has a MoFe7S9 cluster with a central carbon, whereas the H-cluster of [FeFe]-hydrogenase contains a 2Fe subcluster coordinated by cyanide and CO ligands as well as dithiomethylamine; the [Fe]-hydrogenase cofactor has CO and guanylylpyridinol ligands at a mononuclear iron site. Intriguingly, radical S-adenosyl-L-methionine enzymes are vital for the assembly of all three of these diverse cofactors. This minireview presents and discusses the current state of knowledge of the radical S-adenosylmethionine enzymes required for synthesis of these remarkable metal cofactors.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Hydrogenase; Iron-Sulfur Protein; Nitrogenase; Radical; S-Adenosylmethionine (SAM)

Mesh:

Substances:

Year:  2014        PMID: 25477518      PMCID: PMC4326809          DOI: 10.1074/jbc.R114.578161

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  83 in total

Review 1.  Classification and phylogeny of hydrogenases.

Authors:  P M Vignais; B Billoud; J Meyer
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

2.  Identification of the HcgB enzyme in [Fe]-hydrogenase-cofactor biosynthesis.

Authors:  Takashi Fujishiro; Haruka Tamura; Michael Schick; Jörg Kahnt; Xiulan Xie; Ulrich Ermler; Seigo Shima
Journal:  Angew Chem Int Ed Engl       Date:  2013-11-07       Impact factor: 15.336

3.  HydF as a scaffold protein in [FeFe] hydrogenase H-cluster biosynthesis.

Authors:  Shawn E McGlynn; Eric M Shepard; Mark A Winslow; Anatoli V Naumov; Kaitlin S Duschene; Matthew C Posewitz; William E Broderick; Joan B Broderick; John W Peters
Journal:  FEBS Lett       Date:  2008-05-22       Impact factor: 4.124

4.  Regulation of the synthesis of H2-forming methylenetetrahydromethanopterin dehydrogenase (Hmd) and of HmdII and HmdIII in Methanothermobacter marburgensis.

Authors:  C Afting; E Kremmer; C Brucker; A Hochheimer; R K Thauer
Journal:  Arch Microbiol       Date:  2000-10       Impact factor: 2.552

5.  Controlled expression of nif and isc iron-sulfur protein maturation components reveals target specificity and limited functional replacement between the two systems.

Authors:  Patricia C Dos Santos; Deborah C Johnson; Brook E Ragle; Mihaela-Carmen Unciuleac; Dennis R Dean
Journal:  J Bacteriol       Date:  2007-01-19       Impact factor: 3.490

Review 6.  Biosynthesis of complex iron-sulfur enzymes.

Authors:  Eric M Shepard; Eric S Boyd; Joan B Broderick; John W Peters
Journal:  Curr Opin Chem Biol       Date:  2011-03-08       Impact factor: 8.822

7.  Optimization of FeMoco maturation on NifEN.

Authors:  Janice M Yoshizawa; Michael A Blank; Aaron W Fay; Chi Chung Lee; Jared A Wiig; Yilin Hu; Keith O Hodgson; Britt Hedman; Markus W Ribbe
Journal:  J Am Chem Soc       Date:  2009-07-08       Impact factor: 15.419

8.  Functional studies of [FeFe] hydrogenase maturation in an Escherichia coli biosynthetic system.

Authors:  Paul W King; Matthew C Posewitz; Maria L Ghirardi; Michael Seibert
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

Review 9.  Nitrogenase and biological nitrogen fixation.

Authors:  J Kim; D C Rees
Journal:  Biochemistry       Date:  1994-01-18       Impact factor: 3.162

10.  The crystal structure of C176A mutated [Fe]-hydrogenase suggests an acyl-iron ligation in the active site iron complex.

Authors:  Takeshi Hiromoto; Kenichi Ataka; Oliver Pilak; Sonja Vogt; Marco Salomone Stagni; Wolfram Meyer-Klaucke; Eberhard Warkentin; Rudolf K Thauer; Seigo Shima; Ulrich Ermler
Journal:  FEBS Lett       Date:  2009-01-20       Impact factor: 4.124

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  10 in total

1.  Electron-Rich, Diiron Bis(monothiolato) Carbonyls: C-S Bond Homolysis in a Mixed Valence Diiron Dithiolate.

Authors:  Qianli Li; Noémie Lalaoui; Toby J Woods; Thomas B Rauchfuss; Federica Arrigoni; Giuseppe Zampella
Journal:  Inorg Chem       Date:  2018-04-05       Impact factor: 5.165

Review 2.  Enzymatic Cascade Reactions in Biosynthesis.

Authors:  Christopher T Walsh; Bradley S Moore
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-20       Impact factor: 15.336

3.  Iron Carbide-Sulfide Carbonyl Clusters.

Authors:  Liang Liu; Thomas B Rauchfuss; Toby J Woods
Journal:  Inorg Chem       Date:  2019-06-11       Impact factor: 5.165

4.  The radical SAM protein HemW is a heme chaperone.

Authors:  Vera Haskamp; Simone Karrie; Toni Mingers; Stefan Barthels; François Alberge; Axel Magalon; Katrin Müller; Eckhard Bill; Wolfgang Lubitz; Kirstin Kleeberg; Peter Schweyen; Martin Bröring; Martina Jahn; Dieter Jahn
Journal:  J Biol Chem       Date:  2017-12-27       Impact factor: 5.157

Review 5.  Introduction to the thematic minireview series on radical S-adenosylmethionine (SAM) enzymes.

Authors:  Ruma Banerjee
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

6.  H-cluster assembly intermediates built on HydF by the radical SAM enzymes HydE and HydG.

Authors:  Amanda S Byer; Eric M Shepard; Michael W Ratzloff; Jeremiah N Betz; Paul W King; William E Broderick; Joan B Broderick
Journal:  J Biol Inorg Chem       Date:  2019-09-06       Impact factor: 3.358

7.  Electron Spin Relaxation and Biochemical Characterization of the Hydrogenase Maturase HydF: Insights into [2Fe-2S] and [4Fe-4S] Cluster Communication and Hydrogenase Activation.

Authors:  Eric M Shepard; Amanda S Byer; Priyanka Aggarwal; Jeremiah N Betz; Anna G Scott; Krista A Shisler; Robert J Usselman; Gareth R Eaton; Sandra S Eaton; Joan B Broderick
Journal:  Biochemistry       Date:  2017-06-13       Impact factor: 3.162

8.  Proteomic Analysis of Methanococcus voltae Grown in the Presence of Mineral and Nonmineral Sources of Iron and Sulfur.

Authors:  Katherine F Steward; Devon Payne; Will Kincannon; Christina Johnson; Malachi Lensing; Hunter Fausset; Brigitta Németh; Eric M Shepard; William E Broderick; Joan B Broderick; Jen Dubois; Brian Bothner
Journal:  Microbiol Spectr       Date:  2022-07-25

9.  HydG, the "dangler" iron, and catalytic production of free CO and CN-: implications for [FeFe]-hydrogenase maturation.

Authors:  Eric M Shepard; Stella Impano; Benjamin R Duffus; Adrien Pagnier; Kaitlin S Duschene; Jeremiah N Betz; Amanda S Byer; Amanda Galambas; Elizabeth C McDaniel; Hope Watts; Shawn E McGlynn; John W Peters; William E Broderick; Joan B Broderick
Journal:  Dalton Trans       Date:  2021-08-04       Impact factor: 4.569

Review 10.  Catalytic Promiscuity of the Radical S-adenosyl-L-methionine Enzyme NosL.

Authors:  Wei Ding; Xinjian Ji; Yongzhen Li; Qi Zhang
Journal:  Front Chem       Date:  2016-06-22       Impact factor: 5.221

  10 in total

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