Literature DB >> 22911506

Use of a water flip-back pulse in the homonuclear NOESY experiment.

G Lippens1, C Dhalluin, J M Wieruszeski.   

Abstract

A simple modification to the WATERGATE water suppression scheme [Piotto, M., Saudek, V. and Sklenář, V. (1992) J. Biomol. NMR, 2, 661-665] is proposed. Radiation damping is used as an active element during the mixing time of a NOESY experiment, in order to obtain a reproducable state of the water magnetization at the end of the mixing time. Through the use of a water flip-back pulse and a gradient-tailored excitation scheme, we obtain both an excellent water suppression and a water magnetization close to equilibrium at the beginning of the acquisition time. We show experimentally that this modification results in a 20% gain in intensity for all signals when using a relaxation delay of 1.5 s, and also that avoiding a semisaturated state for the water magnetization allows the amide protons as well as other proton resonances to relax to equilibrium with their proper relaxation time.

Entities:  

Year:  1995        PMID: 22911506     DOI: 10.1007/BF00211762

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  11 in total

1.  Protein hydration studied with homonuclear 3D 1H NMR experiments.

Authors:  G Otting; E Liepinsh; B T Farmer; K Wüthrich
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

2.  Improving solvent suppression in jump-return NOESY experiments.

Authors:  J Stonehouse; G L Shaw; J Keeler
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

3.  Binomial frequency response to non-binomial pulse sequences for efficient water suppression.

Authors:  P Sodano; M Delepierre
Journal:  J Biomol NMR       Date:  1993-07       Impact factor: 2.835

4.  Enhanced sensitivity of rapidly exchanging amide protons by improved phase cycling and the constructive use of radiation damping.

Authors:  W Jahnke; H Kessler
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

5.  A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules.

Authors:  A Kumar; R R Ernst; K Wüthrich
Journal:  Biochem Biophys Res Commun       Date:  1980-07-16       Impact factor: 3.575

Review 6.  NMR spectroscopy of hydroxyl protons in aqueous solutions of peptides and proteins.

Authors:  E Liepinsh; G Otting; K Wüthrich
Journal:  J Biomol NMR       Date:  1992-09       Impact factor: 2.835

7.  Backbone 1H and 15N resonance assignments of the N-terminal SH3 domain of drk in folded and unfolded states using enhanced-sensitivity pulsed field gradient NMR techniques.

Authors:  O Zhang; L E Kay; J P Olivier; J D Forman-Kay
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

8.  Measurement of HN-H alpha J couplings in calcium-free calmodulin using new 2D and 3D water-flip-back methods.

Authors:  H Kuboniwa; S Grzesiek; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

9.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

10.  Measurement of amide proton exchange rates and NOEs with water in 13C/15N-enriched calcineurin B.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-11       Impact factor: 2.835

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  36 in total

1.  Application of dipolar coupling data to the refinement of the solution structure of the sarcin-ricin loop RNA.

Authors:  J J Warren; P B Moore
Journal:  J Biomol NMR       Date:  2001-08       Impact factor: 2.835

2.  Structural features of the metal binding site and dynamics of gallium putidaredoxin, a diamagnetic derivative of a Cys4Fe2S2 ferredoxin.

Authors:  S Kazanis; T C Pochapsky
Journal:  J Biomol NMR       Date:  1997-06       Impact factor: 2.835

3.  Measurement of long-range 1H-19F scalar coupling constants and their glycosidic torsion dependence in 5-fluoropyrimidine-substituted RNA.

Authors:  Mirko Hennig; Markéta L Munzarova; Wolfgang Bermel; Lincoln G Scott; Vladimír Sklenar; James R Williamson
Journal:  J Am Chem Soc       Date:  2006-05-03       Impact factor: 15.419

4.  Solution structure and backbone dynamics of Calsensin, an invertebrate neuronal calcium-binding protein.

Authors:  Deepa V Venkitaramani; D Bruce Fulton; Amy H Andreotti; Kristen M Johansen; Jørgen Johansen
Journal:  Protein Sci       Date:  2005-06-03       Impact factor: 6.725

5.  Proton-proton Overhauser NMR spectroscopy with polypeptide chains in large structures.

Authors:  Reto Horst; Gerhard Wider; Jocelyne Fiaux; Eric B Bertelsen; Arthur L Horwich; Kurt Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-10       Impact factor: 11.205

6.  GroEL Recognizes an Amphipathic Helix and Binds to the Hydrophobic Side.

Authors:  Yali Li; Xinfeng Gao; Lingling Chen
Journal:  J Biol Chem       Date:  2008-12-12       Impact factor: 5.157

7.  The extracellular human melanoma inhibitory activity (MIA) protein adopts an SH3 domain-like fold.

Authors:  R Stoll; C Renner; M Zweckstetter; M Brüggert; D Ambrosius; S Palme; R A Engh; M Golob; I Breibach; R Buettner; W Voelter; T A Holak; A K Bosserhoff
Journal:  EMBO J       Date:  2001-02-01       Impact factor: 11.598

8.  Modulation of zinc- and cobalt-binding affinities through changes in the stability of the zinc ribbon protein L36.

Authors:  Wenpeng Kou; Harsha S Kolla; Alfonso Ortiz-Acevedo; Donovan C Haines; Matthew Junker; Gregg R Dieckmann
Journal:  J Biol Inorg Chem       Date:  2005-03-04       Impact factor: 3.358

9.  Dynamics and stability of individual base pairs in two homologous RNA-DNA hybrids.

Authors:  Yuegao Huang; Congju Chen; Irina M Russu
Journal:  Biochemistry       Date:  2009-05-12       Impact factor: 3.162

10.  Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.

Authors:  Dmitri Tolkatchev; Suneil Malik; Anna Vinogradova; Ping Wang; Zhigang Chen; Ping Xu; Hugh P J Bennett; Andrew Bateman; Feng Ni
Journal:  Protein Sci       Date:  2008-04       Impact factor: 6.725

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