Literature DB >> 18359860

Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.

Dmitri Tolkatchev1, Suneil Malik, Anna Vinogradova, Ping Wang, Zhigang Chen, Ping Xu, Hugh P J Bennett, Andrew Bateman, Feng Ni.   

Abstract

Progranulin is a secreted protein with important functions in several physiological and pathological processes, such as embryonic development, host defense, and wound repair. Autosomal dominant mutations in the progranulin gene cause frontotemporal dementia, while overexpression of progranulin promotes the invasive progression of a range of tumors, including those of the breast and the brain. Structurally, progranulin consists of seven-and-a-half tandem repeats of the granulin/epithelin module (GEM), several of which have been isolated as discrete 6-kDa GEM peptides. We have expressed all seven human GEMs using recombinant DNA in Escherichia coli. High-resolution NMR showed that only the three GEMs, hGrnA, hGrnC, and hGrnF, contain relatively well-defined three-dimensional structures in solution, while others are mainly mixtures of poorly structured disulfide isomers. The three-dimensional structures of hGrnA, hGrnC, and hGrnF contain a stable stack of two beta-hairpins in their N-terminal subdomains, but showed a more flexible C-terminal subdomain. Interestingly, of the well-structured GEMs, hGrnA demonstrated potent growth inhibition of a breast cancer cell line, while hGrnF was stimulatory. Poorly folded peptides were either weakly inhibitory or without activity. The functionally active and structurally well-characterized human hGrnA offers a unique opportunity for detailed structure-function studies of these important GEM proteins as novel members of mammalian growth factors.

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Year:  2008        PMID: 18359860      PMCID: PMC2271164          DOI: 10.1110/ps.073295308

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  70 in total

1.  Use of a water flip-back pulse in the homonuclear NOESY experiment.

Authors:  G Lippens; C Dhalluin; J M Wieruszeski
Journal:  J Biomol NMR       Date:  1995-04       Impact factor: 2.835

2.  The role of the thioredoxin and glutaredoxin pathways in reducing protein disulfide bonds in the Escherichia coli cytoplasm.

Authors:  W A Prinz; F Aslund; A Holmgren; J Beckwith
Journal:  J Biol Chem       Date:  1997-06-20       Impact factor: 5.157

3.  Modulation of mouse preimplantation embryo development by acrogranin (epithelin/granulin precursor).

Authors:  L Díaz-Cueto; P Stein; A Jacobs; R M Schultz; G L Gerton
Journal:  Dev Biol       Date:  2000-01-15       Impact factor: 3.582

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Expression of PC-cell-derived growth factor in benign and malignant human breast epithelium.

Authors:  Ginette Serrero; Olga B Ioffe
Journal:  Hum Pathol       Date:  2003-11       Impact factor: 3.466

6.  Differential gene expression profiling in human brain tumors.

Authors:  J M Markert; C M Fuller; G Y Gillespie; J K Bubien; L A McLean; R L Hong; K Lee; S R Gullans; T B Mapstone; D J Benos
Journal:  Physiol Genomics       Date:  2001-02-07       Impact factor: 3.107

7.  Acrogranin, an acrosomal cysteine-rich glycoprotein, is the precursor of the growth-modulating peptides, granulins, and epithelins, and is expressed in somatic as well as male germ cells.

Authors:  T Baba; H B Hoff; H Nemoto; H Lee; J Orth; Y Arai; G L Gerton
Journal:  Mol Reprod Dev       Date:  1993-03       Impact factor: 2.609

8.  Progranulin (PC-cell-derived growth factor/acrogranin) regulates invasion and cell survival.

Authors:  Zhiheng He; Amin Ismail; Leonid Kriazhev; Gulzhakhan Sadvakassova; Andrew Bateman
Journal:  Cancer Res       Date:  2002-10-01       Impact factor: 12.701

Review 9.  Progranulin (granulin-epithelin precursor, PC-cell-derived growth factor, acrogranin) mediates tissue repair and tumorigenesis.

Authors:  Zhiheng He; Andrew Bateman
Journal:  J Mol Med (Berl)       Date:  2003-08-19       Impact factor: 4.599

Review 10.  Granulins: the structure and function of an emerging family of growth factors.

Authors:  A Bateman; H P Bennett
Journal:  J Endocrinol       Date:  1998-08       Impact factor: 4.286

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  72 in total

1.  Special delivery: granulin brings CpG DNA to Toll-like receptor 9.

Authors:  Eva Marie Y Moresco; Bruce Beutler
Journal:  Immunity       Date:  2011-04-22       Impact factor: 31.745

2.  Subclassification and biochemical analysis of plant papain-like cysteine proteases displays subfamily-specific characteristics.

Authors:  Kerstin H Richau; Farnusch Kaschani; Martijn Verdoes; Twinkal C Pansuriya; Sherry Niessen; Kurt Stüber; Tom Colby; Hermen S Overkleeft; Matthew Bogyo; Renier A L Van der Hoorn
Journal:  Plant Physiol       Date:  2012-02-27       Impact factor: 8.340

3.  Functional characterization and molecular mechanism exploration of three granulin epithelin precursor splice variants in biomineralization of the pearl oyster Pinctada fucata.

Authors:  Mi Zhao; Maoxian He; Xiande Huang; Qi Wang; Yu Shi
Journal:  Mol Genet Genomics       Date:  2015-09-20       Impact factor: 3.291

Review 4.  Progranulin: a growth factor, a novel TNFR ligand and a drug target.

Authors:  Chuan-ju Liu; Xavier Bosch
Journal:  Pharmacol Ther       Date:  2011-10-08       Impact factor: 12.310

5.  Structure dissection of zebrafish progranulins identifies a well-folded granulin/epithelin module protein with pro-cell survival activities.

Authors:  Ping Wang; Babykumari Chitramuthu; Andrew Bateman; Hugh P J Bennett; Ping Xu; Feng Ni
Journal:  Protein Sci       Date:  2018-07-18       Impact factor: 6.725

6.  rs5848 polymorphism and serum progranulin level.

Authors:  Ging-Yuek R Hsiung; Alice Fok; Howard H Feldman; Rosa Rademakers; Ian R A Mackenzie
Journal:  J Neurol Sci       Date:  2010-11-02       Impact factor: 3.181

7.  Extracellular progranulin protects cortical neurons from toxic insults by activating survival signaling.

Authors:  Jindong Xu; Maria Xilouri; Julien Bruban; Junichi Shioi; Zhiping Shao; Ioannis Papazoglou; Kostas Vekrellis; Nikolaos K Robakis
Journal:  Neurobiol Aging       Date:  2011-08-04       Impact factor: 4.673

Review 8.  Progranulin, lysosomal regulation and neurodegenerative disease.

Authors:  Aimee W Kao; Andrew McKay; Param Priya Singh; Anne Brunet; Eric J Huang
Journal:  Nat Rev Neurosci       Date:  2017-04-24       Impact factor: 34.870

9.  Fully reduced granulin-B is intrinsically disordered and displays concentration-dependent dynamics.

Authors:  Gaurav Ghag; Lauren M Wolf; Randi G Reed; Nicholas P Van Der Munnik; Claudius Mundoma; Melissa A Moss; Vijayaraghavan Rangachari
Journal:  Protein Eng Des Sel       Date:  2016-03-07       Impact factor: 1.650

10.  Missense mutations in progranulin gene associated with frontotemporal lobar degeneration: study of pathogenetic features.

Authors:  Celeste M Karch; Lubov Ezerskiy; Veronica Redaelli; Anna Rita Giovagnoli; Pietro Tiraboschi; Giuseppe Pelliccioni; Paolo Pelliccioni; Dimos Kapetis; Ilaria D'Amato; Elena Piccoli; Maria Giulia Ferretti; Fabrizio Tagliavini; Giacomina Rossi
Journal:  Neurobiol Aging       Date:  2015-11-02       Impact factor: 4.673

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