Literature DB >> 7919957

Enhanced sensitivity of rapidly exchanging amide protons by improved phase cycling and the constructive use of radiation damping.

W Jahnke1, H Kessler.   

Abstract

Two alternative, general methods are presented that lead to enhanced signal intensity of rapidly exchanging protons. Both methods work by avoiding saturation of the water resonance, and are convenient to implement since they do not use any selective pulses. One method carefully chooses proton pulse phases and gradient strength and position in such a way that the water is realigned along the +z axis at the beginning of the acquisition time. An alternative method is proposed for cases where the pulse sequence does not allow such phase cycling. The latter uses radiation damping to bring water back to the +z axis 20-30 ms after acquisition. The methods are applied to the triple-resonance experiments HNCA, HNCO and HN(CO)CA. Both methods require pulsed B0 field gradients and can result in higher signal intensity by a factor of two or more.

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Year:  1994        PMID: 7919957     DOI: 10.1007/bf00404281

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  6 in total

1.  Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy.

Authors:  G M Clore; P C Driscoll; P T Wingfield; A M Gronenborn
Journal:  Biochemistry       Date:  1990-08-14       Impact factor: 3.162

2.  Application of nonlinear sampling schemes to COSY-type spectra.

Authors:  P Schmieder; A S Stern; G Wagner; J C Hoch
Journal:  J Biomol NMR       Date:  1993-09       Impact factor: 2.835

3.  A general enhancement scheme in heteronuclear multidimensional NMR employing pulsed field gradients.

Authors:  J Schleucher; M Schwendinger; M Sattler; P Schmidt; O Schedletzky; S J Glaser; O W Sørensen; C Griesinger
Journal:  J Biomol NMR       Date:  1994-03       Impact factor: 2.835

4.  Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease.

Authors:  L E Kay; D A Torchia; A Bax
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

5.  Backbone dynamics of the Bacillus subtilis glucose permease IIA domain determined from 15N NMR relaxation measurements.

Authors:  M J Stone; W J Fairbrother; A G Palmer; J Reizer; M H Saier; P E Wright
Journal:  Biochemistry       Date:  1992-05-12       Impact factor: 3.162

6.  Mannose transporter of Escherichia coli. Backbone assignments and secondary structure of the IIA domain of the IIABMan subunit.

Authors:  S Seip; J Balbach; S Behrens; H Kessler; K Flükiger; R de Meyer; B Erni
Journal:  Biochemistry       Date:  1994-06-14       Impact factor: 3.162

  6 in total
  13 in total

1.  Doubly sensitivity-enhanced 3D TOCSY-HSQC.

Authors:  S S Wijmenga; C P van Mierlo; E Steensma
Journal:  J Biomol NMR       Date:  1996-10       Impact factor: 2.835

2.  Full 1H NMR assignment of a 24-nucleotide RNA hairpin: application of the 1H 3D-NOE/2QC experiment.

Authors:  I M Nooren; K Y Wang; P N Borer; I Pelczer
Journal:  J Biomol NMR       Date:  1998-04       Impact factor: 2.835

3.  Use of a water flip-back pulse in the homonuclear NOESY experiment.

Authors:  G Lippens; C Dhalluin; J M Wieruszeski
Journal:  J Biomol NMR       Date:  1995-04       Impact factor: 2.835

4.  Triple-resonance methods for complete resonance assignment of aromatic protons and directly bound heteronuclei in histidine and tryptophan residues.

Authors:  Frank Löhr; Vladimir V Rogov; Meichen Shi; Frank Bernhard; Volker Dötsch
Journal:  J Biomol NMR       Date:  2005-08       Impact factor: 2.835

5.  Possible role of a short extra loop of the long-chain flavodoxin from Azotobacter chroococcum in electron transfer to nitrogenase: complete 1H, 15N and 13C backbone assignments and secondary solution structure of the flavodoxin.

Authors:  S Peelen; S Wijmenga; P J Erbel; R L Robson; R R Eady; J Vervoort
Journal:  J Biomol NMR       Date:  1996-06       Impact factor: 2.835

6.  Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY.

Authors:  K V Pervushin; G Wider; K Wüthrich
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

7.  A Spin System Labeled and Highly Resolved ed-H(CCO)NH-TOCSY Experiment for the Facilitated Assignment of Proton Side Chains in Partially Deuterated Samples.

Authors:  R M Gschwind; G Gemmecker; H Kessler
Journal:  J Biomol NMR       Date:  1998-02       Impact factor: 2.835

8.  Diabetes-associated mutations in a beta-cell transcription factor destabilize an antiparallel "mini-zipper" in a dimerization interface.

Authors:  Q X Hua; M Zhao; N Narayana; S H Nakagawa; W Jia; M A Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

9.  Measurement of intrinsic exchange rates of amide protons in a 15N-labeled peptide.

Authors:  S Koide; W Jahnke; P E Wright
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

10.  Probing the lower size limit for protein-like fold stability: ten-residue microproteins with specific, rigid structures in water.

Authors:  Brandon L Kier; Niels H Andersen
Journal:  J Am Chem Soc       Date:  2008-10-09       Impact factor: 15.419

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