Literature DB >> 22911008

Study of protein dynamics in solution by measurement of (13)C (α)- (13)CO NOE and (13)CO longitudinal relaxation.

L Zeng1, M W Fischer, E R Zuiderweg.   

Abstract

(13)C(α)-(13)CO homonuclear NOE and (13)CO T(1) relaxation were measured for a 20 kDa protein using tripleresonance pulse sequences. The experiments were sufficiently sensitive to obtain statistically significant differences in relaxation parameters over the molecule. The (13)C(α)-(13)CO cross-relaxation rate, obtained from these data, is directly proportional to an order parameter describing local motion and it is largely independent of the local correlation time. It is therefore a relatively straightforward observable for the identification of local dynamics.

Year:  1996        PMID: 22911008     DOI: 10.1007/BF00203826

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  11 in total

1.  Structure of bacteriophage T4 lysozyme refined at 1.7 A resolution.

Authors:  L H Weaver; B W Matthews
Journal:  J Mol Biol       Date:  1987-01-05       Impact factor: 5.469

2.  Backbone dynamics of calmodulin studied by 15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible.

Authors:  G Barbato; M Ikura; L E Kay; R W Pastor; A Bax
Journal:  Biochemistry       Date:  1992-06-16       Impact factor: 3.162

3.  Dynamics of methyl groups in proteins as studied by proton-detected 13C NMR spectroscopy. Application to the leucine residues of staphylococcal nuclease.

Authors:  L K Nicholson; L E Kay; D M Baldisseri; J Arango; P E Young; A Bax; D A Torchia
Journal:  Biochemistry       Date:  1992-06-16       Impact factor: 3.162

4.  15N, 13C, and 1H NMR assignments and secondary structure for T4-lysozyme.

Authors:  M W Fischer; A Majumdar; F W Dahlquist; E R Zuiderweg
Journal:  J Magn Reson B       Date:  1995-08

5.  Backbone dynamics of a two-domain protein: 15N relaxation studies of the amino-terminal fragment of urokinase-type plasminogen activator.

Authors:  A P Hansen; A M Petros; R P Meadows; S W Fesik
Journal:  Biochemistry       Date:  1994-12-27       Impact factor: 3.162

6.  Long-range motional restrictions in a multidomain zinc-finger protein from anisotropic tumbling.

Authors:  R Brüschweiler; X Liao; P E Wright
Journal:  Science       Date:  1995-05-12       Impact factor: 47.728

7.  Backbone dynamics of trp repressor studied by 15N NMR relaxation.

Authors:  Z Zheng; J Czaplicki; O Jardetzky
Journal:  Biochemistry       Date:  1995-04-18       Impact factor: 3.162

8.  Determination of (13)C (α) relaxation times in uniformly (13)C/ (15)N-enriched proteins.

Authors:  J Engelke; H Rüterjans
Journal:  J Biomol NMR       Date:  1995-02       Impact factor: 2.835

9.  Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease.

Authors:  L E Kay; D A Torchia; A Bax
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

10.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

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  13 in total

1.  Assessing potential bias in the determination of rotational correlation times of proteins by NMR relaxation.

Authors:  A L Lee; A J Wand
Journal:  J Biomol NMR       Date:  1999-02       Impact factor: 2.835

2.  Protein backbone dynamics through 13C'-13Calpha cross-relaxation in NMR spectroscopy.

Authors:  Fabien Ferrage; Philippe Pelupessy; David Cowburn; Geoffrey Bodenhausen
Journal:  J Am Chem Soc       Date:  2006-08-30       Impact factor: 15.419

3.  Quantifying Lipari-Szabo modelfree parameters from 13CO NMR relaxation experiments.

Authors:  Tianzhi Wang; Daniel S Weaver; Sheng Cai; Erik R P Zuiderweg
Journal:  J Biomol NMR       Date:  2006-09-22       Impact factor: 2.835

Review 4.  NMR studies of dynamic biomolecular conformational ensembles.

Authors:  Dennis A Torchia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2014-11-28       Impact factor: 9.795

5.  Local mobility of 15N labeled biomolecules characterized through cross-correlation rates: Applications to paramagnetic proteins.

Authors:  I C Felli; H Desvaux; G Bodenhausen
Journal:  J Biomol NMR       Date:  1998-11       Impact factor: 2.835

6.  Characterizing semilocal motions in proteins by NMR relaxation studies.

Authors:  M W Fischer; L Zeng; A Majumdar; E R Zuiderweg
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

7.  Measurement of (13)C (α)- (13)CO cross-relaxation rates in (15)N-/ (13)C-labelled proteins.

Authors:  F Cordier; B Brutscher; D Marion
Journal:  J Biomol NMR       Date:  1996-03       Impact factor: 2.835

8.  Backbone dynamics of proteins derived from carbonyl carbon relaxation times at 500, 600 and 800 MHz: Application to ribonuclease T1.

Authors:  J Engelke; H Rüterjans
Journal:  J Biomol NMR       Date:  1997-01       Impact factor: 2.835

9.  Model selection for the interpretation of protein side chain methyl dynamics.

Authors:  Wing-Yiu Choy; Lewis E Kay
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

10.  Side chain dynamics monitored by 13C-13C cross-relaxation.

Authors:  Klaartje Houben; Rolf Boelens
Journal:  J Biomol NMR       Date:  2004-06       Impact factor: 2.835

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