Literature DB >> 22911465

Determination of (13)C (α) relaxation times in uniformly (13)C/ (15)N-enriched proteins.

J Engelke1, H Rüterjans.   

Abstract

Relaxation times of (13)C(α) carbons of uniformly (13)C/(15)N-enriched probes have been investigated. The relaxation behaviour was analyzed in terms of a multispin system. Pulse sequences for the determination of T(1), T(2) and the heteronuclear NOE of (13)C(α) in uniformly (13)C/(15)N-enriched ribonuclease T1 are presented. The experiments performed in order to obtain T(1) and the heteronuclear NOE were similar to those of the corresponding (15)N experiments published previously. The determination of T(2) for the C(α)-carbon in a completely labeled protein is more complicated, since the magnetization transfer during the T(2) evolution period owing to the scalar coupling of C(α)-C(β) must be suppressed. Various different pulse sequences for the T(2) evolution period were simulated in order to optimize the bandwidth for which reliable T(2) relaxation times can be obtained. A proof for the quality of these pulse sequences is given by fitting the intensity decay of individual (1)H-(13)C(α) cross peaks, in a series of ((1)H, (13)C)-ct-HSQC spectra with a modified CPMG sequence as well as a T(1p) sequence for the transverse relaxation time, to a single exponential using a simplex algorithm.

Entities:  

Year:  1995        PMID: 22911465     DOI: 10.1007/BF00208808

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  8 in total

1.  Backbone dynamics of ribonuclease T1 and its complex with 2'GMP studied by two-dimensional heteronuclear NMR spectroscopy.

Authors:  D Fushman; R Weisemann; H Thüring; H Rüterjans
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

2.  Carbon-13 nuclear magnetic resonance relaxation studies of internal mobility of the polypeptide chain in basic pancreatic trypsin inhibitor and a selectively reduced analogue.

Authors:  R Richarz; K Nagayama; K Wüthrich
Journal:  Biochemistry       Date:  1980-11-11       Impact factor: 3.162

3.  Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy.

Authors:  G M Clore; P C Driscoll; P T Wingfield; A M Gronenborn
Journal:  Biochemistry       Date:  1990-08-14       Impact factor: 3.162

4.  Backbone dynamics of calmodulin studied by 15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible.

Authors:  G Barbato; M Ikura; L E Kay; R W Pastor; A Bax
Journal:  Biochemistry       Date:  1992-06-16       Impact factor: 3.162

5.  Dynamics of methyl groups in proteins as studied by proton-detected 13C NMR spectroscopy. Application to the leucine residues of staphylococcal nuclease.

Authors:  L K Nicholson; L E Kay; D M Baldisseri; J Arango; P E Young; A Bax; D A Torchia
Journal:  Biochemistry       Date:  1992-06-16       Impact factor: 3.162

6.  Backbone dynamics of a model membrane protein: 13C NMR spectroscopy of alanine methyl groups in detergent-solubilized M13 coat protein.

Authors:  G D Henry; J H Weiner; B D Sykes
Journal:  Biochemistry       Date:  1986-02-11       Impact factor: 3.162

7.  Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease.

Authors:  L E Kay; D A Torchia; A Bax
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

8.  Characterization of thermotropic state changes in myosin subfragment-1 and heavy meromyosin by UV difference spectroscopy.

Authors:  U Kamath; J W Shriver
Journal:  J Biol Chem       Date:  1989-04-05       Impact factor: 5.157

  8 in total
  8 in total

1.  Improved accuracy in measuring one-bond and two-bond (15)N, (13)C (α) coupling constants in proteins by double-inphase/antiphase (DIPAP) spectroscopy.

Authors:  Frank Löhr; Sina Reckel; Susanne Stefer; Volker Dötsch; Jürgen M Schmidt
Journal:  J Biomol NMR       Date:  2011-06-07       Impact factor: 2.835

2.  Study of protein dynamics in solution by measurement of (13)C (α)- (13)CO NOE and (13)CO longitudinal relaxation.

Authors:  L Zeng; M W Fischer; E R Zuiderweg
Journal:  J Biomol NMR       Date:  1996-03       Impact factor: 2.835

3.  Measurement of (13)C (α)- (13)CO cross-relaxation rates in (15)N-/ (13)C-labelled proteins.

Authors:  F Cordier; B Brutscher; D Marion
Journal:  J Biomol NMR       Date:  1996-03       Impact factor: 2.835

4.  Backbone dynamics of proteins derived from carbonyl carbon relaxation times at 500, 600 and 800 MHz: Application to ribonuclease T1.

Authors:  J Engelke; H Rüterjans
Journal:  J Biomol NMR       Date:  1997-01       Impact factor: 2.835

5.  Dynamics of beta-CH and beta-CH2 Groups of Amino Acid Side Chains in Proteins.

Authors:  J Engelke; H Rüterjans
Journal:  J Biomol NMR       Date:  1998-02       Impact factor: 2.835

6.  Measurement of methyl 13C-1H cross-correlation in uniformly 13C-, 15N-, labeled proteins.

Authors:  Weidong Liu; Yu Zheng; David P Cistola; Daiwen Yang
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

7.  Model selection for the interpretation of protein side chain methyl dynamics.

Authors:  Wing-Yiu Choy; Lewis E Kay
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

8.  Side chain dynamics monitored by 13C-13C cross-relaxation.

Authors:  Klaartje Houben; Rolf Boelens
Journal:  J Biomol NMR       Date:  2004-06       Impact factor: 2.835

  8 in total

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