Literature DB >> 22908287

An RNA virus hijacks an incognito function of a DNA repair enzyme.

Richard Virgen-Slane1, Janet M Rozovics, Kerry D Fitzgerald, Tuan Ngo, Wayne Chou, Gerbrand J van der Heden van Noort, Dmitri V Filippov, Paul D Gershon, Bert L Semler.   

Abstract

A previously described mammalian cell activity, called VPg unlinkase, specifically cleaves a unique protein-RNA covalent linkage generated during the viral genomic RNA replication steps of a picornavirus infection. For over three decades, the identity of this cellular activity and its normal role in the uninfected cell had remained elusive. Here we report the purification and identification of VPg unlinkase as the DNA repair enzyme, 5'-tyrosyl-DNA phosphodiesterase-2 (TDP2). Our data show that VPg unlinkase activity in different mammalian cell lines correlates with their differential expression of TDP2. Furthermore, we show that recombinant TDP2 can cleave the protein-RNA linkage generated by different picornaviruses without impairing the integrity of viral RNA. Our results reveal a unique RNA repair-like function for TDP2 and suggest an unusual role in host-pathogen interactions for this cellular enzyme. On the basis of the identification of TDP2 as a potential antiviral target, our findings may lead to the development of universal therapeutics to treat the millions of individuals afflicted annually with diseases caused by picornaviruses, including myocarditis, aseptic meningitis, encephalitis, hepatitis, and the common cold.

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Year:  2012        PMID: 22908287      PMCID: PMC3437895          DOI: 10.1073/pnas.1208096109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Isolation from ascites carcinoma Krebs II cells of an unlinking enzyme hydrolyzing a covalent bond between picornavirus RNA and VPg.

Authors:  R A Yusupova; A Y Gulevich; Y F Drygin
Journal:  Biochemistry (Mosc)       Date:  2000-10       Impact factor: 2.487

2.  Sequence analysis identifies TTRAP, a protein that associates with CD40 and TNF receptor-associated factors, as a member of a superfamily of divalent cation-dependent phosphodiesterases.

Authors:  F Rodrigues-Lima; M Josephs; M Katan; B Cassinat
Journal:  Biochem Biophys Res Commun       Date:  2001-08-03       Impact factor: 3.575

Review 3.  Cation-pi interactions in ligand recognition and catalysis.

Authors:  Niki Zacharias; Dennis A Dougherty
Journal:  Trends Pharmacol Sci       Date:  2002-06       Impact factor: 14.819

4.  An enzymatic activity in uninfected cells that cleaves the linkage between poliovirion RNA and the 5' terminal protein.

Authors:  V Ambros; R F Pettersson; D Baltimore
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

5.  The 5'-terminal structures of poliovirion RNA and poliovirus mRNA differ only in the genome-linked protein VPg.

Authors:  A Nomoto; N Kitamura; F Golini; E Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

6.  Purification and properties of a HeLa cell enzyme able to remove the 5'-terminal protein from poliovirus RNA.

Authors:  V Ambros; D Baltimore
Journal:  J Biol Chem       Date:  1980-07-25       Impact factor: 5.157

7.  A phosphodiesterase from ascites carcinoma Krebs II cells specifically cleaves the bond between VPg and RNA of encephalomyocarditis virus.

Authors:  A Y Gulevich; R A Yusupova; Y F Drygin
Journal:  Biochemistry (Mosc)       Date:  2001-03       Impact factor: 2.487

8.  VPg unlinkase, the phosphodiesterase that hydrolyzes the bond between VPg and picornavirus RNA: a minimal nucleic moiety of the substrate.

Authors:  A Yu Gulevich; R A Yusupova; Yu F Drygin
Journal:  Biochemistry (Mosc)       Date:  2002-06       Impact factor: 2.487

9.  EAPII interacts with ETS1 and modulates its transcriptional function.

Authors:  Huiping Pei; John S Yordy; Qixin Leng; Qinghua Zhao; Dennis K Watson; Runzhao Li
Journal:  Oncogene       Date:  2003-05-08       Impact factor: 9.867

10.  Removal of the genome-linked protein of foot-and-mouth disease virus by rabbit reticulocyte lysate.

Authors:  D V Sangar; J Bryant; T J Harris; F Brown; D J Rowlands
Journal:  J Virol       Date:  1981-07       Impact factor: 5.103

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  51 in total

Review 1.  Metabolism and function of hepatitis B virus cccDNA: Implications for the development of cccDNA-targeting antiviral therapeutics.

Authors:  Ju-Tao Guo; Haitao Guo
Journal:  Antiviral Res       Date:  2015-08-10       Impact factor: 5.970

Review 2.  Tyrosyl-DNA-phosphodiesterases (TDP1 and TDP2).

Authors:  Yves Pommier; Shar-yin N Huang; Rui Gao; Benu Brata Das; Junko Murai; Christophe Marchand
Journal:  DNA Repair (Amst)       Date:  2014-05-22

3.  Ribonucleotide triggered DNA damage and RNA-DNA damage responses.

Authors:  Bret D Wallace; R Scott Williams
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

Review 4.  Recognition and repair of chemically heterogeneous structures at DNA ends.

Authors:  Sara N Andres; Matthew J Schellenberg; Bret D Wallace; Percy Tumbale; R Scott Williams
Journal:  Environ Mol Mutagen       Date:  2014-08-11       Impact factor: 3.216

Review 5.  The cutting edges in DNA repair, licensing, and fidelity: DNA and RNA repair nucleases sculpt DNA to measure twice, cut once.

Authors:  Susan E Tsutakawa; Julien Lafrance-Vanasse; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2014-04-19

6.  Novel deazaflavin tyrosyl-DNA phosphodiesterase 2 (TDP2) inhibitors.

Authors:  Evgeny Kiselev; Azhar Ravji; Jayakanth Kankanala; Jiashu Xie; Zhengqiang Wang; Yves Pommier
Journal:  DNA Repair (Amst)       Date:  2019-11-06

7.  Limits of variation, specific infectivity, and genome packaging of massively recoded poliovirus genomes.

Authors:  Yutong Song; Oleksandr Gorbatsevych; Ying Liu; JoAnn Mugavero; Sam H Shen; Charles B Ward; Emmanuel Asare; Ping Jiang; Aniko V Paul; Steffen Mueller; Eckard Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-25       Impact factor: 11.205

8.  New fluorescence-based high-throughput screening assay for small molecule inhibitors of tyrosyl-DNA phosphodiesterase 2 (TDP2).

Authors:  Carlos J A Ribeiro; Jayakanth Kankanala; Ke Shi; Kayo Kurahashi; Evgeny Kiselev; Azhar Ravji; Yves Pommier; Hideki Aihara; Zhengqiang Wang
Journal:  Eur J Pharm Sci       Date:  2018-03-21       Impact factor: 4.384

Review 9.  Drugging topoisomerases: lessons and challenges.

Authors:  Yves Pommier
Journal:  ACS Chem Biol       Date:  2013-01-04       Impact factor: 5.100

10.  Proteolytic degradation of topoisomerase II (Top2) enables the processing of Top2·DNA and Top2·RNA covalent complexes by tyrosyl-DNA-phosphodiesterase 2 (TDP2).

Authors:  Rui Gao; Matthew J Schellenberg; Shar-Yin N Huang; Monica Abdelmalak; Christophe Marchand; Karin C Nitiss; John L Nitiss; R Scott Williams; Yves Pommier
Journal:  J Biol Chem       Date:  2014-05-07       Impact factor: 5.157

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