Literature DB >> 24856239

Tyrosyl-DNA-phosphodiesterases (TDP1 and TDP2).

Yves Pommier1, Shar-yin N Huang2, Rui Gao2, Benu Brata Das3, Junko Murai4, Christophe Marchand2.   

Abstract

TDP1 and TDP2 were discovered and named based on the fact they process 3'- and 5'-DNA ends by excising irreversible protein tyrosyl-DNA complexes involving topoisomerases I and II, respectively. Yet, both enzymes have an extended spectrum of activities. TDP1 not only excises trapped topoisomerases I (Top1 in the nucleus and Top1mt in mitochondria), but also repairs oxidative damage-induced 3'-phosphoglycolates and alkylation damage-induced DNA breaks, and excises chain terminating anticancer and antiviral nucleosides in the nucleus and mitochondria. The repair function of TDP2 is devoted to the excision of topoisomerase II- and potentially topoisomerases III-DNA adducts. TDP2 is also essential for the life cycle of picornaviruses (important human and bovine pathogens) as it unlinks VPg proteins from the 5'-end of the viral RNA genome. Moreover, TDP2 has been involved in signal transduction (under the former names of TTRAP or EAPII). The DNA repair partners of TDP1 include PARP1, XRCC1, ligase III and PNKP from the base excision repair (BER) pathway. By contrast, TDP2 repair functions are coordinated with Ku and ligase IV in the non-homologous end joining pathway (NHEJ). This article summarizes and compares the biochemistry, functions, and post-translational regulation of TDP1 and TDP2, as well as the relevance of TDP1 and TDP2 as determinants of response to anticancer agents. We discuss the rationale for developing TDP inhibitors for combinations with topoisomerase inhibitors (topotecan, irinotecan, doxorubicin, etoposide, mitoxantrone) and DNA damaging agents (temozolomide, bleomycin, cytarabine, and ionizing radiation), and as novel antiviral agents. Published by Elsevier B.V.

Entities:  

Keywords:  Chemotherapy; Homologous Recombination (HR); Non-homologous end joining (NHEJ); Poly(ADPribose) polymerases (PARP); Topoisomerases

Mesh:

Substances:

Year:  2014        PMID: 24856239      PMCID: PMC4090310          DOI: 10.1016/j.dnarep.2014.03.020

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  200 in total

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6.  Spontaneous DNA lesions poison human topoisomerase IIalpha and stimulate cleavage proximal to leukemic 11q23 chromosomal breakpoints.

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Review 7.  Simultaneous amplification of HER-2 (ERBB2) and topoisomerase IIalpha (TOP2A) genes--molecular basis for combination chemotherapy in cancer.

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Journal:  Curr Cancer Drug Targets       Date:  2006-11       Impact factor: 3.428

8.  5-Arylidenethioxothiazolidinones as inhibitors of tyrosyl-DNA phosphodiesterase I.

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  124 in total

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Authors:  Daniel E Beck; Monica Abdelmalak; Wei Lv; P V Narasimha Reddy; Gabrielle S Tender; Elizaveta O'Neill; Keli Agama; Christophe Marchand; Yves Pommier; Mark Cushman
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Review 2.  Topoisomerases and the regulation of neural function.

Authors:  Peter J McKinnon
Journal:  Nat Rev Neurosci       Date:  2016-09-15       Impact factor: 34.870

Review 3.  Replication-Coupled DNA Repair.

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Review 4.  The role of DNA base excision repair in brain homeostasis and disease.

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Journal:  DNA Repair (Amst)       Date:  2015-05-01

5.  TDP1 promotes assembly of non-homologous end joining protein complexes on DNA.

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Journal:  DNA Repair (Amst)       Date:  2015-03-17

6.  Ribonucleotide triggered DNA damage and RNA-DNA damage responses.

Authors:  Bret D Wallace; R Scott Williams
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

7.  Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening.

Authors:  George T Lountos; Xue Zhi Zhao; Evgeny Kiselev; Joseph E Tropea; Danielle Needle; Yves Pommier; Terrence R Burke; David S Waugh
Journal:  Nucleic Acids Res       Date:  2019-11-04       Impact factor: 16.971

Review 8.  Mechanisms of DNA-protein crosslink repair.

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Journal:  Nat Rev Mol Cell Biol       Date:  2017-06-28       Impact factor: 94.444

9.  BRCA1 ensures genome integrity by eliminating estrogen-induced pathological topoisomerase II-DNA complexes.

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Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-23       Impact factor: 11.205

10.  Proteolytic degradation of topoisomerase II (Top2) enables the processing of Top2·DNA and Top2·RNA covalent complexes by tyrosyl-DNA-phosphodiesterase 2 (TDP2).

Authors:  Rui Gao; Matthew J Schellenberg; Shar-Yin N Huang; Monica Abdelmalak; Christophe Marchand; Karin C Nitiss; John L Nitiss; R Scott Williams; Yves Pommier
Journal:  J Biol Chem       Date:  2014-05-07       Impact factor: 5.157

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