Literature DB >> 12084634

Cation-pi interactions in ligand recognition and catalysis.

Niki Zacharias1, Dennis A Dougherty.   

Abstract

The cation-pi interaction is a potent, general noncovalent binding force that is observed in a wide range of biological contexts. Here, we present an overview of well documented cases in which a cation-pi interaction makes an important contribution to small-molecule recognition at a protein binding site. From these and other studies it is clear that, in addition to the hydrophobic effect, hydrogen bonding and ion pairing, the cation-pi interaction must be considered when evaluating drug-receptor interactions.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12084634     DOI: 10.1016/s0165-6147(02)02027-8

Source DB:  PubMed          Journal:  Trends Pharmacol Sci        ISSN: 0165-6147            Impact factor:   14.819


  88 in total

1.  Computational analysis of HIV-1 protease protein binding pockets.

Authors:  Gene M Ko; A Srinivas Reddy; Sunil Kumar; Barbara A Bailey; Rajni Garg
Journal:  J Chem Inf Model       Date:  2010-10-25       Impact factor: 4.956

2.  Orphan G protein-coupled receptors MrgA1 and MrgC11 are distinctively activated by RF-amide-related peptides through the Galpha q/11 pathway.

Authors:  Sang-Kyou Han; Xinzhong Dong; Jong-Ik Hwang; Mark J Zylka; David J Anderson; Melvin I Simon
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-23       Impact factor: 11.205

3.  The mitochondriotoxic domain of Vpr determines HIV-1 virulence.

Authors:  Catherine Brenner; Guido Kroemer
Journal:  J Clin Invest       Date:  2003-05       Impact factor: 14.808

4.  Interaction of DNA with clusters of amino acids in proteins.

Authors:  R Sathyapriya; Saraswathi Vishveshwara
Journal:  Nucleic Acids Res       Date:  2004-08-09       Impact factor: 16.971

5.  Cation-pi interactions studied in a model coiled-coil peptide.

Authors:  Morris M Slutsky; E Neil G Marsh
Journal:  Protein Sci       Date:  2004-07-06       Impact factor: 6.725

6.  Correlation between biological activity and binding energy in systems of integrin with cyclic RGD-containing binders: a QM/MM molecular dynamics study.

Authors:  Mingli Xiang; Yuchun Lin; Gu He; Lijuan Chen; Mingli Yang; Shengyong Yang; Yirong Mo
Journal:  J Mol Model       Date:  2012-06-27       Impact factor: 1.810

7.  Variola virus IL-18 binding protein interacts with three human IL-18 residues that are part of a binding site for human IL-18 receptor alpha subunit.

Authors:  Xiangzhi Meng; Michael Leman; Yan Xiang
Journal:  Virology       Date:  2006-09-18       Impact factor: 3.616

Review 8.  Incorporation of Non-Canonical Amino Acids.

Authors:  Lilia Leisle; Francis Valiyaveetil; Ryan A Mehl; Christopher A Ahern
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

9.  Structural and functional insights into TRiC chaperonin from a psychrophilic yeast, Glaciozyma antarctica.

Authors:  Nur Athirah Yusof; Shazilah Kamaruddin; Farah Diba Abu Bakar; Nor Muhammad Mahadi; Abdul Munir Abdul Murad
Journal:  Cell Stress Chaperones       Date:  2019-01-16       Impact factor: 3.667

10.  Conformational changes of glucose/galactose-binding protein illuminated by open, unliganded, and ultra-high-resolution ligand-bound structures.

Authors:  M Jack Borrok; Laura L Kiessling; Katrina T Forest
Journal:  Protein Sci       Date:  2007-05-01       Impact factor: 6.725

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.