Literature DB >> 22896801

In vivo application of optogenetics for neural circuit analysis.

Xue Han1.   

Abstract

Optogenetics combines optical and genetic methods to rapidly and reversibly control neural activities or other cellular functions. Using genetic methods, specific cells or anatomical pathways can be sensitized to light through exogenous expression of microbial light activated opsin proteins. Using optical methods, opsin expressing cells can be rapidly and reversibly controlled by pulses of light of specific wavelength. With the high spatial temporal precision, optogenetic tools have enabled new ways to probe the causal role of specific cells in neural computation and behavior. Here, we overview the current state of the technology, and provide a brief introduction to the practical considerations in applying optogenetics in vivo to analyze neural circuit functions.

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Year:  2012        PMID: 22896801      PMCID: PMC3419447          DOI: 10.1021/cn300065j

Source DB:  PubMed          Journal:  ACS Chem Neurosci        ISSN: 1948-7193            Impact factor:   4.418


  64 in total

1.  Properties and photochemistry of a halorhodopsin from the haloalkalophile, Natronobacterium pharaonis.

Authors:  A Duschl; J K Lanyi; L Zimányi
Journal:  J Biol Chem       Date:  1990-01-25       Impact factor: 5.157

2.  Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin.

Authors:  Xiang Li; Davina V Gutierrez; M Gartz Hanson; Jing Han; Melanie D Mark; Hillel Chiel; Peter Hegemann; Lynn T Landmesser; Stefan Herlitze
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-23       Impact factor: 11.205

3.  Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.

Authors:  Georg Nagel; Martin Brauner; Jana F Liewald; Nona Adeishvili; Ernst Bamberg; Alexander Gottschalk
Journal:  Curr Biol       Date:  2005-12-20       Impact factor: 10.834

4.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

5.  Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas.

Authors:  Hongxia Wang; Yuka Sugiyama; Takuya Hikima; Eriko Sugano; Hiroshi Tomita; Tetsuo Takahashi; Toru Ishizuka; Hiromu Yawo
Journal:  J Biol Chem       Date:  2008-12-22       Impact factor: 5.157

6.  Pathway-specific feedforward circuits between thalamus and neocortex revealed by selective optical stimulation of axons.

Authors:  Scott J Cruikshank; Hayato Urabe; Arto V Nurmikko; Barry W Connors
Journal:  Neuron       Date:  2010-01-28       Impact factor: 17.173

7.  Millisecond-timescale optical control of neural dynamics in the nonhuman primate brain.

Authors:  Xue Han; Xiaofeng Qian; Jacob G Bernstein; Hui-Hui Zhou; Giovanni Talei Franzesi; Patrick Stern; Roderick T Bronson; Ann M Graybiel; Robert Desimone; Edward S Boyden
Journal:  Neuron       Date:  2009-04-30       Impact factor: 17.173

8.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

9.  A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex.

Authors:  Xue Han; Brian Y Chow; Huihui Zhou; Nathan C Klapoetke; Amy Chuong; Reza Rajimehr; Aimei Yang; Michael V Baratta; Jonathan Winkle; Robert Desimone; Edward S Boyden
Journal:  Front Syst Neurosci       Date:  2011-04-13

10.  Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin.

Authors:  Lei Wen; Hongxia Wang; Saki Tanimoto; Ryo Egawa; Yoshiya Matsuzaka; Hajime Mushiake; Toru Ishizuka; Hiromu Yawo
Journal:  PLoS One       Date:  2010-09-23       Impact factor: 3.240

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  22 in total

Review 1.  Optrodes for combined optogenetics and electrophysiology in live animals.

Authors:  Suzie Dufour; Yves De Koninck
Journal:  Neurophotonics       Date:  2015-07-02       Impact factor: 3.593

2.  Kinetic and vibrational isotope effects of proton transfer reactions in channelrhodopsin-2.

Authors:  Tom Resler; Bernd-Joachim Schultz; Víctor A Lórenz-Fonfría; Ramona Schlesinger; Joachim Heberle
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

3.  Rationally Designed MicroRNA-Based Genetic Classifiers Target Specific Neurons in the Brain.

Authors:  Marianna K Sayeg; Benjamin H Weinberg; Susie S Cha; Michael Goodloe; Wilson W Wong; Xue Han
Journal:  ACS Synth Biol       Date:  2015-04-13       Impact factor: 5.110

Review 4.  New Neuroscience Tools That Are Identifying the Sleep-Wake Circuit.

Authors:  Priyattam J Shiromani; John H Peever
Journal:  Sleep       Date:  2017-04-01       Impact factor: 5.849

Review 5.  Recent advances in engineering microbial rhodopsins for optogenetics.

Authors:  R Scott McIsaac; Claire N Bedbrook; Frances H Arnold
Journal:  Curr Opin Struct Biol       Date:  2015-06-01       Impact factor: 6.809

Review 6.  Fluorescent protein biosensors applied to microphysiological systems.

Authors:  Nina Senutovitch; Lawrence Vernetti; Robert Boltz; Richard DeBiasio; Albert Gough; D Lansing Taylor
Journal:  Exp Biol Med (Maywood)       Date:  2015-05-19

7.  Visible-light silicon nitride waveguide devices and implantable neurophotonic probes on thinned 200 mm silicon wafers.

Authors:  Wesley D Sacher; Xianshu Luo; Yisu Yang; Fu-Der Chen; Thomas Lordello; Jason C C Mak; Xinyu Liu; Ting Hu; Tianyuan Xue; Patrick Guo-Qiang Lo; Michael L Roukes; Joyce K S Poon
Journal:  Opt Express       Date:  2019-12-23       Impact factor: 3.894

8.  Optogenetic Stimulation of Midbrain Dopamine Neurons Produces Striatal Serotonin Release.

Authors:  Merel Dagher; Katie A Perrotta; Sara A Erwin; Ayaka Hachisuka; Rahul Iyer; Sotiris C Masmanidis; Hongyan Yang; Anne M Andrews
Journal:  ACS Chem Neurosci       Date:  2022-03-21       Impact factor: 5.780

9.  Resonance Raman Study of an Anion Channelrhodopsin: Effects of Mutations near the Retinylidene Schiff Base.

Authors:  Adrian Yi; Natalia Mamaeva; Hai Li; John L Spudich; Kenneth J Rothschild
Journal:  Biochemistry       Date:  2016-04-14       Impact factor: 3.162

10.  In vivo expression of a light-activatable potassium channel using unnatural amino acids.

Authors:  Ji-Yong Kang; Daichi Kawaguchi; Irene Coin; Zheng Xiang; Dennis D M O'Leary; Paul A Slesinger; Lei Wang
Journal:  Neuron       Date:  2013-10-16       Impact factor: 17.173

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