Literature DB >> 26158014

Optrodes for combined optogenetics and electrophysiology in live animals.

Suzie Dufour1, Yves De Koninck2.   

Abstract

Optical tissue properties limit visible light depth penetration in tissue. Because of this, the recent development of optogenetic tools was quickly followed by the development of light delivery devices for in vivo optogenetics applications. We summarize the efforts made in the last decade to design neural probes that combine conventional electrophysiological recordings and optical channel(s) for optogenetic activation, often referred to as optodes or optrodes. Several aspects including challenges for light delivery in living brain tissue, the combination of light delivery with electrophysiological recordings, probe designs, multimodality, wireless implantable system, and practical considerations guiding the choice of configuration depending on the questions one seeks to address are presented.

Keywords:  fiber optics; genetically-encoded sensors; light-tissue interactions; neuroscience; opsins

Year:  2015        PMID: 26158014      PMCID: PMC4489589          DOI: 10.1117/1.NPh.2.3.031205

Source DB:  PubMed          Journal:  Neurophotonics        ISSN: 2329-423X            Impact factor:   3.593


  119 in total

1.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
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2.  Layer-specific excitatory circuits differentially control recurrent network dynamics in the neocortex.

Authors:  Riccardo Beltramo; Giulia D'Urso; Marco Dal Maschio; Pasqualina Farisello; Serena Bovetti; Yoanne Clovis; Glenda Lassi; Valter Tucci; Davide De Pietri Tonelli; Tommaso Fellin
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3.  Targeted optogenetic stimulation and recording of neurons in vivo using cell-type-specific expression of Channelrhodopsin-2.

Authors:  Jessica A Cardin; Marie Carlén; Konstantinos Meletis; Ulf Knoblich; Feng Zhang; Karl Deisseroth; Li-Huei Tsai; Christopher I Moore
Journal:  Nat Protoc       Date:  2010-01-21       Impact factor: 13.491

4.  Imaging neural spiking in brain tissue using FRET-opsin protein voltage sensors.

Authors:  Yiyang Gong; Mark J Wagner; Jin Zhong Li; Mark J Schnitzer
Journal:  Nat Commun       Date:  2014-04-22       Impact factor: 14.919

5.  Three-dimensional multiwaveguide probe array for light delivery to distributed brain circuits.

Authors:  Anthony N Zorzos; Jorg Scholvin; Edward S Boyden; Clifton G Fonstad
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6.  A genetically encoded calcium indicator for chronic in vivo two-photon imaging.

Authors:  Marco Mank; Alexandre Ferrão Santos; Stephan Direnberger; Thomas D Mrsic-Flogel; Sonja B Hofer; Valentin Stein; Thomas Hendel; Dierk F Reiff; Christiaan Levelt; Alexander Borst; Tobias Bonhoeffer; Mark Hübener; Oliver Griesbeck
Journal:  Nat Methods       Date:  2008-09       Impact factor: 28.547

7.  Optogenetics.

Authors:  Karl Deisseroth
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

8.  Thermal and optical characterization of micro-LED probes for in vivo optogenetic neural stimulation.

Authors:  Niall McAlinden; David Massoubre; Elliot Richardson; Erdan Gu; Shuzo Sakata; Martin D Dawson; Keith Mathieson
Journal:  Opt Lett       Date:  2013-03-15       Impact factor: 3.776

9.  A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex.

Authors:  Xue Han; Brian Y Chow; Huihui Zhou; Nathan C Klapoetke; Amy Chuong; Reza Rajimehr; Aimei Yang; Michael V Baratta; Jonathan Winkle; Robert Desimone; Edward S Boyden
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Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  13 in total

1.  Modal demultiplexing properties of tapered and nanostructured optical fibers for in vivo optogenetic control of neural activity.

Authors:  Marco Pisanello; Andrea Della Patria; Leonardo Sileo; Bernardo L Sabatini; Massimo De Vittorio; Ferruccio Pisanello
Journal:  Biomed Opt Express       Date:  2015-09-17       Impact factor: 3.732

2.  Discrete Evaluative and Premotor Circuits Enable Vocal Learning in Songbirds.

Authors:  Matthew Gene Kearney; Timothy L Warren; Erin Hisey; Jiaxuan Qi; Richard Mooney
Journal:  Neuron       Date:  2019-08-22       Impact factor: 17.173

3.  Fabrication and analysis of microfiber array platform for optogenetics with cellular resolution.

Authors:  Jian-Hong Chen; Ming-Yi Chou; Chien-Yuan Pan; Lon A Wang
Journal:  Biomed Opt Express       Date:  2016-10-05       Impact factor: 3.732

4.  Tapered fibertrodes for optoelectrical neural interfacing in small brain volumes with reduced artefacts.

Authors:  Barbara Spagnolo; Antonio Balena; Rui T Peixoto; Marco Pisanello; Leonardo Sileo; Marco Bianco; Alessandro Rizzo; Filippo Pisano; Antonio Qualtieri; Dario Domenico Lofrumento; Francesco De Nuccio; John A Assad; Bernardo L Sabatini; Massimo De Vittorio; Ferruccio Pisanello
Journal:  Nat Mater       Date:  2022-06-06       Impact factor: 47.656

5.  Divergent functions of the left and right central amygdala in visceral nociception.

Authors:  Katelyn E Sadler; Neal A McQuaid; Abigail C Cox; Marissa N Behun; Allison M Trouten; Benedict J Kolber
Journal:  Pain       Date:  2017-04       Impact factor: 7.926

6.  A Wireless Optogenetic Headstage with Multichannel Electrophysiological Recording Capability.

Authors:  Gabriel Gagnon-Turcotte; Alireza Avakh Kisomi; Reza Ameli; Charles-Olivier Dufresne Camaro; Yoan LeChasseur; Jean-Luc Néron; Paul Brule Bareil; Paul Fortier; Cyril Bories; Yves de Koninck; Benoit Gosselin
Journal:  Sensors (Basel)       Date:  2015-09-09       Impact factor: 3.576

7.  A Toolbox for Optophysiological Experiments in Freely Moving Rats.

Authors:  Stefanie Hardung; Mansour Alyahyay; David Eriksson; Ilka Diester
Journal:  Front Syst Neurosci       Date:  2017-05-11

8.  A novel carbon tipped single micro-optrode for combined optogenetics and electrophysiology.

Authors:  Dénes Budai; Attila D Vizvári; Zsolt K Bali; Balázs Márki; Lili V Nagy; Zoltán Kónya; Dániel Madarász; Nóra Henn-Mike; Csaba Varga; István Hernádi
Journal:  PLoS One       Date:  2018-03-07       Impact factor: 3.240

9.  Optical Waveguides and Integrated Optical Devices for Medical Diagnosis, Health Monitoring and Light Therapies.

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Journal:  Sensors (Basel)       Date:  2020-07-17       Impact factor: 3.576

10.  Microstructured Optical Waveguide-Based Endoscopic Probe Coated with Silica Submicron Particles.

Authors:  Timur Ermatov; Yury V Petrov; Sergei V German; Anastasia A Zanishevskaya; Andrey A Shuvalov; Vsevolod Аtkin; Andrey Zakharevich; Boris N Khlebtsov; Julia S Skibina; Pavel Ginzburg; Roman E Noskov; Valery V Tuchin; Dmitry A Gorin
Journal:  Materials (Basel)       Date:  2019-05-01       Impact factor: 3.623

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