Literature DB >> 22895337

Microbial engineering for the production of advanced biofuels.

Pamela P Peralta-Yahya1, Fuzhong Zhang, Stephen B del Cardayre, Jay D Keasling.   

Abstract

Advanced biofuels produced by microorganisms have similar properties to petroleum-based fuels, and can 'drop in' to the existing transportation infrastructure. However, producing these biofuels in yields high enough to be useful requires the engineering of the microorganism's metabolism. Such engineering is not based on just one specific feedstock or host organism. Data-driven and synthetic-biology approaches can be used to optimize both the host and pathways to maximize fuel production. Despite some success, challenges still need to be met to move advanced biofuels towards commercialization, and to compete with more conventional fuels.

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Year:  2012        PMID: 22895337     DOI: 10.1038/nature11478

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  87 in total

Review 1.  Manufacturing molecules through metabolic engineering.

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Journal:  Science       Date:  2010-12-03       Impact factor: 47.728

2.  Engineering static and dynamic control of synthetic pathways.

Authors:  William J Holtz; Jay D Keasling
Journal:  Cell       Date:  2010-01-08       Impact factor: 41.582

Review 3.  Applications of genetically-encoded biosensors for the construction and control of biosynthetic pathways.

Authors:  Joshua K Michener; Kate Thodey; Joe C Liang; Christina D Smolke
Journal:  Metab Eng       Date:  2011-09-18       Impact factor: 9.783

Review 4.  Biosynthesis of polyketides in heterologous hosts.

Authors:  B A Pfeifer; C Khosla
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

5.  Engineering Escherichia coli for biodiesel production utilizing a bacterial fatty acid methyltransferase.

Authors:  Parwez Nawabi; Stefan Bauer; Nikos Kyrpides; Athanasios Lykidis
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

6.  Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered Escherichia coli.

Authors:  Gregory Bokinsky; Pamela P Peralta-Yahya; Anthe George; Bradley M Holmes; Eric J Steen; Jeffrey Dietrich; Taek Soon Lee; Danielle Tullman-Ercek; Christopher A Voigt; Blake A Simmons; Jay D Keasling
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-28       Impact factor: 11.205

Review 7.  Metabolic engineering of Clostridium acetobutylicum: recent advances to improve butanol production.

Authors:  Tina Lütke-Eversloh; Hubert Bahl
Journal:  Curr Opin Biotechnol       Date:  2011-03-04       Impact factor: 9.740

8.  Widespread head-to-head hydrocarbon biosynthesis in bacteria and role of OleA.

Authors:  David J Sukovich; Jennifer L Seffernick; Jack E Richman; Jeffrey A Gralnick; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2010-04-23       Impact factor: 4.792

9.  Enhancing sesquiterpene production in Saccharomyces cerevisiae through in silico driven metabolic engineering.

Authors:  Mohammad A Asadollahi; Jérôme Maury; Kiran Raosaheb Patil; Michel Schalk; Anthony Clark; Jens Nielsen
Journal:  Metab Eng       Date:  2009-07-18       Impact factor: 9.783

Review 10.  Fermentative butanol production by Clostridia.

Authors:  Sang Yup Lee; Jin Hwan Park; Seh Hee Jang; Lars K Nielsen; Jaehyun Kim; Kwang S Jung
Journal:  Biotechnol Bioeng       Date:  2008-10-01       Impact factor: 4.530

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  243 in total

1.  Bacterial synthesis of C3-C5 diols via extending amino acid catabolism.

Authors:  Jian Wang; Chenyi Li; Yusong Zou; Yajun Yan
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-27       Impact factor: 11.205

Review 2.  Biosynthesis of terpene compounds using the non-model yeast Yarrowia lipolytica: grand challenges and a few perspectives.

Authors:  Alyssa M Worland; Jeffrey J Czajka; Yanran Li; Yechun Wang; Yinjie J Tang; Wei Wen Su
Journal:  Curr Opin Biotechnol       Date:  2020-04-13       Impact factor: 9.740

3.  Environmental dependence of stationary-phase metabolism in Bacillus subtilis and Escherichia coli.

Authors:  Victor Chubukov; Uwe Sauer
Journal:  Appl Environ Microbiol       Date:  2014-02-28       Impact factor: 4.792

4.  Modulation of FadR binding capacity for acyl-CoA fatty acids through structure-guided mutagenesis.

Authors:  John-Paul Bacik; Chris M Yeager; Scott N Twary; Ricardo Martí-Arbona
Journal:  Protein J       Date:  2015-10       Impact factor: 2.371

5.  Synthesis and scavenging role of furan fatty acids.

Authors:  Rachelle A S Lemke; Amelia C Peterson; Eva C Ziegelhoffer; Michael S Westphall; Henrik Tjellström; Joshua J Coon; Timothy J Donohue
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

6.  Lignin valorization through integrated biological funneling and chemical catalysis.

Authors:  Jeffrey G Linger; Derek R Vardon; Michael T Guarnieri; Eric M Karp; Glendon B Hunsinger; Mary Ann Franden; Christopher W Johnson; Gina Chupka; Timothy J Strathmann; Philip T Pienkos; Gregg T Beckham
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

7.  Biochemical and structural studies of NADH-dependent FabG used to increase the bacterial production of fatty acids under anaerobic conditions.

Authors:  Pouya Javidpour; Jose H Pereira; Ee-Been Goh; Ryan P McAndrew; Suzanne M Ma; Gregory D Friedland; Jay D Keasling; Swapnil R Chhabra; Paul D Adams; Harry R Beller
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

Review 8.  Recent advances in the microbial production of isopentanol (3-Methyl-1-butanol).

Authors:  Weerawat Runguphan; Kittapong Sae-Tang; Sutipa Tanapongpipat
Journal:  World J Microbiol Biotechnol       Date:  2021-05-27       Impact factor: 3.312

9.  A General Method for Quantification and Discovery of Acyl Groups Attached to Acyl Carrier Proteins in Fatty Acid Metabolism Using LC-MS/MS.

Authors:  Jeong-Won Nam; Lauren M Jenkins; Jia Li; Bradley S Evans; Jan G Jaworski; Doug K Allen
Journal:  Plant Cell       Date:  2020-02-14       Impact factor: 11.277

10.  Microbial biosynthesis of medium-chain 1-alkenes by a nonheme iron oxidase.

Authors:  Zhe Rui; Xin Li; Xuejun Zhu; Joyce Liu; Bonnie Domigan; Ian Barr; Jamie H D Cate; Wenjun Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-08       Impact factor: 11.205

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