Literature DB >> 25092344

Lignin valorization through integrated biological funneling and chemical catalysis.

Jeffrey G Linger1, Derek R Vardon2, Michael T Guarnieri1, Eric M Karp1, Glendon B Hunsinger3, Mary Ann Franden1, Christopher W Johnson1, Gina Chupka4, Timothy J Strathmann5, Philip T Pienkos3, Gregg T Beckham6.   

Abstract

Lignin is an energy-dense, heterogeneous polymer comprised of phenylpropanoid monomers used by plants for structure, water transport, and defense, and it is the second most abundant biopolymer on Earth after cellulose. In production of fuels and chemicals from biomass, lignin is typically underused as a feedstock and burned for process heat because its inherent heterogeneity and recalcitrance make it difficult to selectively valorize. In nature, however, some organisms have evolved metabolic pathways that enable the utilization of lignin-derived aromatic molecules as carbon sources. Aromatic catabolism typically occurs via upper pathways that act as a "biological funnel" to convert heterogeneous substrates to central intermediates, such as protocatechuate or catechol. These intermediates undergo ring cleavage and are further converted via the β-ketoadipate pathway to central carbon metabolism. Here, we use a natural aromatic-catabolizing organism, Pseudomonas putida KT2440, to demonstrate that these aromatic metabolic pathways can be used to convert both aromatic model compounds and heterogeneous, lignin-enriched streams derived from pilot-scale biomass pretreatment into medium chain-length polyhydroxyalkanoates (mcl-PHAs). mcl-PHAs were then isolated from the cells and demonstrated to be similar in physicochemical properties to conventional carbohydrate-derived mcl-PHAs, which have applications as bioplastics. In a further demonstration of their utility, mcl-PHAs were catalytically converted to both chemical precursors and fuel-range hydrocarbons. Overall, this work demonstrates that the use of aromatic catabolic pathways enables an approach to valorize lignin by overcoming its inherent heterogeneity to produce fuels, chemicals, and materials.

Entities:  

Keywords:  aromatic degradation; biofuels; biorefinery; lignocellulose

Mesh:

Substances:

Year:  2014        PMID: 25092344      PMCID: PMC4143016          DOI: 10.1073/pnas.1410657111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Microbial engineering for the production of advanced biofuels.

Authors:  Pamela P Peralta-Yahya; Fuzhong Zhang; Stephen B del Cardayre; Jay D Keasling
Journal:  Nature       Date:  2012-08-16       Impact factor: 49.962

Review 2.  A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry.

Authors:  Guo-Qiang Chen
Journal:  Chem Soc Rev       Date:  2009-05-08       Impact factor: 54.564

Review 3.  Deconstruction of lignocellulosic biomass to fuels and chemicals.

Authors:  Shishir P S Chundawat; Gregg T Beckham; Michael E Himmel; Bruce E Dale
Journal:  Annu Rev Chem Biomol Eng       Date:  2011       Impact factor: 11.059

Review 4.  Pathways for degradation of lignin in bacteria and fungi.

Authors:  Timothy D H Bugg; Mark Ahmad; Elizabeth M Hardiman; Rahman Rahmanpour
Journal:  Nat Prod Rep       Date:  2011-09-15       Impact factor: 13.423

5.  Bioconversion of lignin model compounds with oleaginous Rhodococci.

Authors:  Matyas Kosa; Arthur J Ragauskas
Journal:  Appl Microbiol Biotechnol       Date:  2011-12-10       Impact factor: 4.813

Review 6.  The ins and outs of ring-cleaving dioxygenases.

Authors:  Frédéric H Vaillancourt; Jeffrey T Bolin; Lindsay D Eltis
Journal:  Crit Rev Biochem Mol Biol       Date:  2006 Jul-Aug       Impact factor: 8.250

7.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

8.  Breaking down lignin to high-value chemicals: the conversion of lignocellulose to vanillin in a gene deletion mutant of Rhodococcus jostii RHA1.

Authors:  Paul D Sainsbury; Elizabeth M Hardiman; Mark Ahmad; Hiroshi Otani; Nicolas Seghezzi; Lindsay D Eltis; Timothy D H Bugg
Journal:  ACS Chem Biol       Date:  2013-08-08       Impact factor: 5.100

9.  Application of (R)-3-hydroxyalkanoate methyl esters derived from microbial polyhydroxyalkanoates as novel biofuels.

Authors:  Xiaojun Zhang; Rongcong Luo; Zhen Wang; Yuan Deng; Guo-Qiang Chen
Journal:  Biomacromolecules       Date:  2009-04-13       Impact factor: 6.988

Review 10.  Functional and evolutionary relationships among diverse oxygenases.

Authors:  S Harayama; M Kok; E L Neidle
Journal:  Annu Rev Microbiol       Date:  1992       Impact factor: 15.500

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  106 in total

1.  Decoding how a soil bacterium extracts building blocks and metabolic energy from ligninolysis provides road map for lignin valorization.

Authors:  Arul M Varman; Lian He; Rhiannon Follenfant; Weihua Wu; Sarah Wemmer; Steven A Wrobel; Yinjie J Tang; Seema Singh
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-15       Impact factor: 11.205

2.  Construction and Optimization of a Heterologous Pathway for Protocatechuate Catabolism in Escherichia coli Enables Bioconversion of Model Aromatic Compounds.

Authors:  Sonya M Clarkson; Richard J Giannone; Donna M Kridelbaugh; James G Elkins; Adam M Guss; Joshua K Michener
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

3.  Promoting microbial utilization of phenolic substrates from bio-oil.

Authors:  Kirsten Davis; Marjorie R Rover; Davinia Salvachúa; Ryan G Smith; Gregg T Beckham; Zhiyou Wen; Robert C Brown; Laura R Jarboe
Journal:  J Ind Microbiol Biotechnol       Date:  2019-07-04       Impact factor: 3.346

4.  Carbon Source-Dependent Inducible Metabolism of Veratryl Alcohol and Ferulic Acid in Pseudomonas putida CSV86.

Authors:  Karishma Mohan; Prashant S Phale
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

5.  Electrochemical Aminoxyl-Mediated Oxidation of Primary Alcohols in Lignin to Carboxylic Acids: Polymer Modification and Depolymerization.

Authors:  Mohammad Rafiee; Manar Alherech; Steven D Karlen; Shannon S Stahl
Journal:  J Am Chem Soc       Date:  2019-09-16       Impact factor: 15.419

6.  Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects.

Authors:  Ruben Shrestha; Gaochao Huang; David A Meekins; Brian V Geisbrecht; Ping Li
Journal:  ACS Catal       Date:  2017-08-09       Impact factor: 13.084

7.  Simultaneous Improvements of Pseudomonas Cell Growth and Polyhydroxyalkanoate Production from a Lignin Derivative for Lignin-Consolidated Bioprocessing.

Authors:  Xiaopeng Wang; Lu Lin; Junde Dong; Juan Ling; Wanpeng Wang; Hongling Wang; Zhichao Zhang; Xinwei Yu
Journal:  Appl Environ Microbiol       Date:  2018-08-31       Impact factor: 4.792

8.  Intracellular pathways for lignin catabolism in white-rot fungi.

Authors:  Carlos Del Cerro; Erika Erickson; Tao Dong; Allison R Wong; Elizabeth K Eder; Samuel O Purvine; Hugh D Mitchell; Karl K Weitz; Lye Meng Markillie; Meagan C Burnet; David W Hoyt; Rosalie K Chu; Jan-Fang Cheng; Kelsey J Ramirez; Rui Katahira; Wei Xiong; Michael E Himmel; Venkataramanan Subramanian; Jeffrey G Linger; Davinia Salvachúa
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

9.  Bacterial Catabolism of β-Hydroxypropiovanillone and β-Hydroxypropiosyringone Produced in the Reductive Cleavage of Arylglycerol-β-Aryl Ether in Lignin.

Authors:  Yudai Higuchi; Shogo Aoki; Hiroki Takenami; Naofumi Kamimura; Kenji Takahashi; Shojiro Hishiyama; Christopher S Lancefield; O Stephen Ojo; Yoshihiro Katayama; Nicholas J Westwood; Eiji Masai
Journal:  Appl Environ Microbiol       Date:  2018-03-19       Impact factor: 4.792

10.  Characterization of alkylguaiacol-degrading cytochromes P450 for the biocatalytic valorization of lignin.

Authors:  Morgan M Fetherolf; David J Levy-Booth; Laura E Navas; Jie Liu; Jason C Grigg; Andrew Wilson; Rui Katahira; Gregg T Beckham; William W Mohn; Lindsay D Eltis
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-28       Impact factor: 11.205

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