Literature DB >> 22894329

Exact Green's function of the reversible diffusion-influenced reaction for an isolated pair in two dimensions.

Thorsten Prüstel1, Martin Meier-Schellersheim.   

Abstract

We derive an exact Green's function of the diffusion equation for a pair of disk-shaped interacting particles in two dimensions subject to a backreaction boundary condition. Furthermore, we use the obtained function to calculate exact expressions for the survival probability and the time-dependent rate coefficient for the initially unbound pair and the survival probability of the bound state. The derived expressions will be of particular utility for the description of reversible membrane-bound reactions in cell biology.

Mesh:

Year:  2012        PMID: 22894329      PMCID: PMC3422329          DOI: 10.1063/1.4737662

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

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2.  Excited-state reversible geminate recombination in two dimensions.

Authors:  Kihyun Park; Kook Joe Shin; Hyojoon Kim
Journal:  J Chem Phys       Date:  2009-10-21       Impact factor: 3.488

3.  Simulating biochemical networks at the particle level and in time and space: Green's function reaction dynamics.

Authors:  Jeroen S van Zon; Pieter Rein ten Wolde
Journal:  Phys Rev Lett       Date:  2005-04-01       Impact factor: 9.161

4.  Introduction: 100 years of Brownian motion.

Authors:  Peter Hänggi; Fabio Marchesoni
Journal:  Chaos       Date:  2005-06       Impact factor: 3.642

5.  Green's-function reaction dynamics: a particle-based approach for simulating biochemical networks in time and space.

Authors:  Jeroen S van Zon; Pieter Rein ten Wolde
Journal:  J Chem Phys       Date:  2005-12-15       Impact factor: 3.488

6.  Elementary steps in excited-state proton transfer.

Authors:  Noam Agmon
Journal:  J Phys Chem A       Date:  2005-01-13       Impact factor: 2.781

  6 in total
  9 in total

1.  Theory of bi-molecular association dynamics in 2D for accurate model and experimental parameterization of binding rates.

Authors:  Osman N Yogurtcu; Margaret E Johnson
Journal:  J Chem Phys       Date:  2015-08-28       Impact factor: 3.488

2.  Reversible diffusion-influenced reactions of an isolated pair on some two dimensional surfaces.

Authors:  Thorsten Prüstel; M Tachiya
Journal:  J Chem Phys       Date:  2013-11-21       Impact factor: 3.488

3.  Unified path integral approach to theories of diffusion-influenced reactions.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  Phys Rev E       Date:  2017-08-25       Impact factor: 2.529

4.  Rate coefficients, binding probabilities, and related quantities for area reactivity models.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2014-11-21       Impact factor: 3.488

5.  Theory of reversible diffusion-influenced reactions with non-Markovian dissociation in two space dimensions.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2013-03-14       Impact factor: 3.488

6.  The area reactivity model of geminate recombination.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2014-03-21       Impact factor: 3.488

7.  Quantifying the roles of space and stochasticity in computer simulations for cell biology and cellular biochemistry.

Authors:  M E Johnson; A Chen; J R Faeder; P Henning; I I Moraru; M Meier-Schellersheim; R F Murphy; T Prüstel; J A Theriot; A M Uhrmacher
Journal:  Mol Biol Cell       Date:  2020-11-25       Impact factor: 4.138

8.  Space-time histories approach to fast stochastic simulation of bimolecular reactions.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2021-04-28       Impact factor: 3.488

9.  Diffusion in a disk with inclusion: Evaluating Green's functions.

Authors:  Remus Stana; Grant Lythe
Journal:  PLoS One       Date:  2022-04-14       Impact factor: 3.240

  9 in total

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