Literature DB >> 23514470

Theory of reversible diffusion-influenced reactions with non-Markovian dissociation in two space dimensions.

Thorsten Prüstel1, Martin Meier-Schellersheim.   

Abstract

We investigate the reversible diffusion-influenced reaction of an isolated pair in the presence of a non-Markovian generalization of the backreaction boundary condition in two space dimensions. Following earlier work by Agmon and Weiss, we consider residence time probability densities that decay slower than an exponential and that are characterized by a single parameter 0 < σ ≤ 1. We calculate an exact expression for a Green's function of the two-dimensional diffusion equation subject to a non-Markovian backreaction boundary condition that is valid for arbitrary σ and for all times. We use the obtained expression to derive the survival probability for the initially unbound pair and we calculate an exact expression for the probability S(t[line]*) that the initially bound particle is unbound. Finally, we obtain an approximate solution for long times. In particular, we show that the ultimate fate of the bound state is complete dissociation, as in the Markovian case. However, the limiting value is approached quite differently: Instead of a ~t(-1) decay, we obtain 1 - S(t[line]*) ~ t(-σ)ln t. The derived expressions should be relevant for a better understanding of reversible membrane-bound reactions in cell biology.

Mesh:

Year:  2013        PMID: 23514470      PMCID: PMC3612112          DOI: 10.1063/1.4794311

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

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Authors:  Ioanna Bethani; Sigrid S Skånland; Ivan Dikic; Amparo Acker-Palmer
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2.  Simulating biochemical networks at the particle level and in time and space: Green's function reaction dynamics.

Authors:  Jeroen S van Zon; Pieter Rein ten Wolde
Journal:  Phys Rev Lett       Date:  2005-04-01       Impact factor: 9.161

3.  Green's-function reaction dynamics: a particle-based approach for simulating biochemical networks in time and space.

Authors:  Jeroen S van Zon; Pieter Rein ten Wolde
Journal:  J Chem Phys       Date:  2005-12-15       Impact factor: 3.488

4.  Exact Green's function of the reversible diffusion-influenced reaction for an isolated pair in two dimensions.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2012-08-07       Impact factor: 3.488

  4 in total
  3 in total

1.  Reversible diffusion-influenced reactions of an isolated pair on some two dimensional surfaces.

Authors:  Thorsten Prüstel; M Tachiya
Journal:  J Chem Phys       Date:  2013-11-21       Impact factor: 3.488

2.  Unified path integral approach to theories of diffusion-influenced reactions.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  Phys Rev E       Date:  2017-08-25       Impact factor: 2.529

3.  The area reactivity model of geminate recombination.

Authors:  Thorsten Prüstel; Martin Meier-Schellersheim
Journal:  J Chem Phys       Date:  2014-03-21       Impact factor: 3.488

  3 in total

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