| Literature DB >> 22879986 |
Xiu-Ping Hu1, Ji-Qin Wu, Li-Ping Zhu, Xuan Wang, Bin Xu, Rui-Ying Wang, Xue-Ting Ou, Xin-Hua Weng.
Abstract
BACKGROUND: As important regulators of the immune system, the human Fcγ receptors (FcγRs) have been demonstrated to play important roles in the pathogenesis of various infectious diseases. The aim of the present study was to identify the association between FCGR polymorphisms and cryptococcal meningitis. METHODOLOGY/PRINCIPALEntities:
Mesh:
Substances:
Year: 2012 PMID: 22879986 PMCID: PMC3411792 DOI: 10.1371/journal.pone.0042439
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical information and predisposing factors in 117 patients with cryptococcal meningitis.
| Characteristics | N (%)/median (range) |
| Male | 74 (63.2) |
| Age (years) | 45 (14–78) |
| Confirmed cases | 101 (86.3) |
| Probable cases | 16 (13.7) |
| Predisposing factorsa | 59 (50.4) |
| Autoimmune diseases | 18 (15.4) |
| Diabetes mellitus | 13 (11.1) |
| Liver cirrhosis | 6 (5.1) |
| Chronic kidney diseases | 5 (4.3) |
| Solid malignancies | 2 (1.7) |
| Kidney transplantation | 2 (1.7) |
| Corticosteroids | 21 (17.9) |
| Immunosuppression | 12 (10.3) |
| Idiopathic CD4+ T lymphocytopenia | 13 (11.1) |
| Severe cryptococcal meningitis | 35 (29.9) |
| Disturbance of consciousness | 31 (26.5) |
| Cerebral herniation | 9 (7.7) |
| Death | 5 (4.3) |
NOTE: aPredisposing factors including immunocompromising diseases (liver cirrhosis, chronic kidney diseases, autoimmune diseases, malignancies, solid organ transplantation, diabetes mellitus), and corticosteroid or immunosuppressive medications, and idiopathic CD4+ T lymphocytopenia. Some patients had more than one predisposing factors.
Defined as receiving prednisone of a mean minimum dose of 0.3 mg/kg/day, or equivalent doses of other corticosteroids for >3 weeks.
Immunosuppressive agents including cyclosporine, tripterygium glycosides, vincristine, etc.
Patients with one or more conditions including disturbance of consciousness, cerebral herniation, and death were classified as severe cases.
Distribution of FCGR2A, FCGR3A, FCGR3B, FCGR2B genotypes in patients with cryptococcal meningitis and controlsa.
| Genotypes | All patients (117) | Patients without predisposing factors (58) | Controls (190) | |||||||
| N | % | P | OR (95% CI) | N | % | P | OR (95% CI) | N | % | |
|
| ||||||||||
| 131H/H (Dominant | 47 | 40 | 0.335 | 0.795 (0.50–1.27) | 28 | 48 | 0.740 | 1.105 (0.61–1.99) | 87 | 46 |
| 131H/R (Over-dominant | 48 | 41 | 0.859 | 1.043 (0.65–1.67) | 23 | 40 | 0.963 | 0.986 (0.54–1.80) | 76 | 40 |
| 131R/R (Recessive | 22 | 19 | 0.286 | 1.398 (0.75–2.59) | 7 | 12 | 0.678 | 0.829 (0.34–2.02) | 27 | 14 |
| 131H (Allelic | 142 | 61 | 0.201 | 0.803 (0.57–1.13) | 79 | 75 | 0.644 | 1.110 (0.71–1.73) | 250 | 66 |
|
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| 158F/F (Dominant) | 52 | 45 | 0.889 | 0.967 (0.61–1.54) | 28 | 48 | 0.687 | 1.129 (0.63–2.03) | 86 | 45 |
| 158F/V (Over-dominant) | 54 | 46 | 0.740 | 1.082 (0.68–1.72) | 22 | 38 | 0.397 | 0.771 (0.42–1.41) | 84 | 44 |
| 158V/V (Recessive) | 11 | 9 | 0.751 | 0.882 (0.41–1.91) | 8 | 14 | 0.491 | 1.360 (0.57–3.27) | 20 | 11 |
| 158F (Allelic) | 158 | 68 | 0.969 | 1.007 (0.71–1.43) | 76 | 74 | 0.980 | 0.994 (0.64–1.55) | 256 | 67 |
|
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| NA1/NA1 (Dominant) | 34 | 29 | 0.852 | 0.953 (0.57–1.58) | 15 | 26 | 0.576 | 0.827 (0.43–1.61) | 57 | 30 |
| NA1/NA2 (Over-dominant) | 73 | 63 | 0.276 | 1.301 (0.81–2.09) | 38 | 67 | 0.176 | 1.533 (0.82–2.85) | 107 | 57 |
| NA2/NA2 (Recessive) | 9 | 8 | 0.178 | 0.578 (0.26–1.29) | 4 | 7 | 0.341 | 0.519 (0.17–1.56) | 24 | 13 |
| NA1/NA3 | 0 | 0 | – | – | 0 | 0 | – | – | 1 | – |
| NA1 (Allelic) | 141 | 61 | 0.626 | 1.087 (0.78–1.52) | 68 | 65 | 0.868 | 1.037 (0.68–1.60) | 221 | 58 |
|
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| 232I/I (Dominant) | 75 | 65 | 0.039 | 1.652 (1.02–2.67) | 40 | 69 | 0.033 | 1.958 (1.05–3.66) | 101 | 53 |
| 232I/T (Over-dominant) | 31 | 27 | 0.016 | 0.542 (0.33–0.90) | 14 | 24 | 0.023 | 0.467 (0.24–0.91) | 77 | 40 |
| 232T/T (Recessive) | 9 | 8 | 0.614 | 1.259 (0.51–3.09) | 4 | 7 | 1.000 | 1.099 (0.34–3.55) | 12 | 7 |
| 232I (Allelic) | 131 | 79 | 0.128 | 1.352 (0.92–1.99) | 94 | 89 | 0.097 | 1.547 (0.92–2.59) | 279 | 73 |
NOTE: aThe patient group included 101 confirmed cases and 16 probable cases of cryptococcal meningitis, among which 59 were with predisposing factors and 58 were apparently healthy.
Dominant: heterozygotes and homozygotes for mutant allele vs. homozygotes for wildtype allele. Over-dominant: homozygotes for mutant and wildtype allele vs. heterozygotes. Recessive: homozygotes for mutant allele vs. heterozygotes and homozygotes for wildtype allele. Allelic: mutant alleles vs. wildtype alleles.
Analyzed by Fisher’s exact test. The other data were all analyzed with 2×2 χ2 test.
There was a haplotype of FCGR3B NA (141G-147C-227G-277A-349A) in controls which has not been reported in previous studies. We defined it as NA3.
P<0.05.
Product size and primers of eight SNPs in FCGRs.
| SNP ID | Product size (bp) | PCR primer sequence | Extension primer sequence |
|
| 587 | F:TTGCCTATAAGAGAATGCTCACATCTR:AAGCTCTGGCCCCTACTTGTT | SR: |
|
| 1537 | F:GAATTGCCAGGCTGAGCAAR:CAGGCTTTGAAGTCTTTGATGTG | SR: |
|
| 2394 | F:CCTCAGCACATATCAGTGGTGGTR:AGCCCAAAGAGAGGGATTCTG | SR: |
|
| 1413 | F:CACATCTATAGCTGTGGATTGAGGTAR:TCCATATGGGGATTCTTGGAA | rs403016SF: |
Note: F indicates forward primer, R indicates reverse primer.