| Literature DB >> 22807705 |
Sadif A Shirvan1, Sara Haydari Dezfuli.
Abstract
In the title compound, [CdBr(2)(C(12)H(12)N(2))(C(2)H(6)OS)], the Cd(II) atom is five-coordinated in a distorted trigonal-bipyramidal geometry by two N atoms from one 4,4'-dimethyl-2,2'-bipyridine (DMBP) ligand, one O atom from a dimethyl sulfoxide (DMSO) ligand and two Br atoms. A weak intra-molecular C-H⋯O hydrogen bond occurs between the DMBP and DMSO ligands. π-π stacking between pyridine rings [centroid-centroid distances = 3.682 (3) and 3.598 (3) Å] is observed in the crystal.Entities:
Year: 2012 PMID: 22807705 PMCID: PMC3393245 DOI: 10.1107/S1600536812028553
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CdBr2(C12H12N2)(C2H6OS)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 10741 reflections |
| θ = 1.9–27.0° | |
| µ = 5.59 mm−1 | |
| β = 103.377 (5)° | Block, colorless |
| 0.33 × 0.28 × 0.20 mm | |
| Bruker APEXII CCD area-detector diffractometer | 4054 independent reflections |
| Radiation source: fine-focus sealed tube | 3008 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 27.0°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 16741 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4054 reflections | (Δ/σ)max = 0.010 |
| 190 parameters | Δρmax = 0.53 e Å−3 |
| 0 restraints | Δρmin = −0.42 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0502 (6) | 0.2148 (3) | 0.6246 (3) | 0.0501 (11) | |
| H1 | 0.0521 | 0.2350 | 0.6838 | 0.060* | |
| C2 | −0.0370 (7) | 0.2624 (3) | 0.5505 (3) | 0.0526 (12) | |
| H2 | −0.0933 | 0.3127 | 0.5599 | 0.063* | |
| C3 | −0.0391 (7) | 0.2337 (3) | 0.4611 (3) | 0.0528 (12) | |
| C4 | −0.1294 (8) | 0.2827 (4) | 0.3769 (4) | 0.0767 (18) | |
| H4A | −0.0862 | 0.3409 | 0.3779 | 0.092* | |
| H4B | −0.2437 | 0.2854 | 0.3769 | 0.092* | |
| H4C | −0.1160 | 0.2529 | 0.3223 | 0.092* | |
| C5 | 0.0474 (6) | 0.1592 (3) | 0.4529 (3) | 0.0473 (11) | |
| H5 | 0.0502 | 0.1387 | 0.3944 | 0.057* | |
| C6 | 0.1305 (5) | 0.1138 (2) | 0.5302 (2) | 0.0373 (9) | |
| C7 | 0.2243 (5) | 0.0322 (2) | 0.5237 (3) | 0.0365 (9) | |
| C8 | 0.2297 (6) | −0.0049 (3) | 0.4393 (3) | 0.0426 (10) | |
| H8 | 0.1732 | 0.0214 | 0.3848 | 0.051* | |
| C9 | 0.3177 (6) | −0.0803 (3) | 0.4350 (3) | 0.0476 (11) | |
| C10 | 0.3268 (7) | −0.1202 (3) | 0.3438 (3) | 0.0634 (14) | |
| H10A | 0.2846 | −0.1787 | 0.3402 | 0.076* | |
| H10B | 0.4387 | −0.1213 | 0.3387 | 0.076* | |
| H10C | 0.2629 | −0.0858 | 0.2943 | 0.076* | |
| C11 | 0.3983 (7) | −0.1162 (3) | 0.5174 (3) | 0.0535 (12) | |
| H11 | 0.4593 | −0.1670 | 0.5178 | 0.064* | |
| C12 | 0.3894 (7) | −0.0776 (3) | 0.5995 (3) | 0.0539 (12) | |
| H12 | 0.4446 | −0.1034 | 0.6545 | 0.065* | |
| C13 | 0.5760 (15) | −0.1667 (4) | 0.8786 (5) | 0.144 (4) | |
| H13A | 0.6672 | −0.1729 | 0.8502 | 0.173* | |
| H13B | 0.4795 | −0.1906 | 0.8385 | 0.173* | |
| H13C | 0.5987 | −0.1973 | 0.9365 | 0.173* | |
| C14 | 0.7460 (8) | −0.0254 (5) | 0.9509 (4) | 0.094 (2) | |
| H14A | 0.7545 | 0.0372 | 0.9532 | 0.112* | |
| H14B | 0.8195 | −0.0483 | 0.9159 | 0.112* | |
| H14C | 0.7744 | −0.0485 | 1.0126 | 0.112* | |
| N1 | 0.1310 (5) | 0.1425 (2) | 0.6162 (2) | 0.0418 (8) | |
| N2 | 0.3045 (5) | −0.0041 (2) | 0.6035 (2) | 0.0424 (8) | |
| Br1 | 0.35504 (9) | 0.19185 (4) | 0.84879 (4) | 0.0779 (2) | |
| Br2 | 0.07055 (8) | −0.04712 (4) | 0.79461 (3) | 0.06865 (18) | |
| O1 | 0.5107 (5) | −0.0161 (3) | 0.8016 (2) | 0.0663 (10) | |
| S1 | 0.54455 (17) | −0.05549 (9) | 0.89770 (7) | 0.0547 (3) | |
| Cd1 | 0.27102 (4) | 0.05814 (2) | 0.741841 (19) | 0.04315 (10) |
| C1 | 0.065 (3) | 0.048 (2) | 0.040 (2) | 0.002 (2) | 0.017 (2) | −0.0086 (18) |
| C2 | 0.060 (3) | 0.046 (2) | 0.053 (3) | 0.011 (2) | 0.016 (2) | −0.002 (2) |
| C3 | 0.062 (3) | 0.051 (3) | 0.043 (2) | 0.005 (2) | 0.007 (2) | 0.0069 (19) |
| C4 | 0.094 (5) | 0.076 (4) | 0.058 (3) | 0.032 (3) | 0.014 (3) | 0.017 (3) |
| C5 | 0.060 (3) | 0.051 (2) | 0.030 (2) | 0.000 (2) | 0.0084 (19) | 0.0015 (17) |
| C6 | 0.043 (2) | 0.040 (2) | 0.0296 (19) | −0.0028 (18) | 0.0094 (17) | −0.0016 (15) |
| C7 | 0.042 (2) | 0.0367 (19) | 0.0315 (18) | −0.0094 (17) | 0.0090 (17) | −0.0005 (14) |
| C8 | 0.049 (3) | 0.048 (2) | 0.0295 (19) | −0.003 (2) | 0.0061 (18) | 0.0004 (16) |
| C9 | 0.057 (3) | 0.047 (2) | 0.039 (2) | −0.004 (2) | 0.012 (2) | −0.0054 (17) |
| C10 | 0.083 (4) | 0.067 (3) | 0.045 (3) | 0.001 (3) | 0.024 (3) | −0.011 (2) |
| C11 | 0.062 (3) | 0.050 (3) | 0.051 (3) | 0.012 (2) | 0.017 (2) | −0.003 (2) |
| C12 | 0.069 (3) | 0.050 (3) | 0.039 (2) | 0.009 (2) | 0.006 (2) | 0.0047 (18) |
| C13 | 0.262 (13) | 0.059 (4) | 0.091 (5) | 0.014 (6) | 0.003 (7) | 0.010 (3) |
| C14 | 0.075 (5) | 0.144 (6) | 0.055 (3) | −0.019 (4) | 0.001 (3) | 0.000 (4) |
| N1 | 0.050 (2) | 0.0409 (18) | 0.0332 (17) | −0.0013 (17) | 0.0076 (16) | −0.0039 (14) |
| N2 | 0.050 (2) | 0.0457 (19) | 0.0309 (16) | 0.0009 (17) | 0.0077 (15) | 0.0003 (14) |
| Br1 | 0.1001 (5) | 0.0708 (3) | 0.0542 (3) | −0.0152 (3) | 0.0004 (3) | −0.0206 (2) |
| Br2 | 0.0777 (4) | 0.0856 (4) | 0.0417 (3) | −0.0271 (3) | 0.0118 (2) | 0.0113 (2) |
| O1 | 0.066 (2) | 0.091 (2) | 0.0404 (17) | 0.022 (2) | 0.0083 (16) | 0.0151 (17) |
| S1 | 0.0557 (7) | 0.0726 (7) | 0.0358 (5) | 0.0043 (7) | 0.0102 (5) | 0.0008 (5) |
| Cd1 | 0.0511 (2) | 0.04968 (17) | 0.02831 (14) | −0.00105 (16) | 0.00838 (12) | 0.00028 (12) |
| C1—N1 | 1.318 (6) | C10—H10B | 0.9600 |
| C1—C2 | 1.380 (7) | C10—H10C | 0.9600 |
| C1—H1 | 0.9300 | C11—C12 | 1.372 (6) |
| C2—C3 | 1.394 (6) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—N2 | 1.339 (6) |
| C3—C5 | 1.373 (7) | C12—H12 | 0.9300 |
| C3—C4 | 1.504 (7) | C13—S1 | 1.754 (7) |
| C4—H4A | 0.9600 | C13—H13A | 0.9600 |
| C4—H4B | 0.9600 | C13—H13B | 0.9600 |
| C4—H4C | 0.9600 | C13—H13C | 0.9600 |
| C5—C6 | 1.384 (6) | C14—S1 | 1.755 (6) |
| C5—H5 | 0.9300 | C14—H14A | 0.9600 |
| C6—N1 | 1.351 (5) | C14—H14B | 0.9600 |
| C6—C7 | 1.489 (6) | C14—H14C | 0.9600 |
| C7—N2 | 1.342 (5) | Cd1—O1 | 2.301 (4) |
| C7—C8 | 1.387 (5) | Cd1—N1 | 2.349 (3) |
| C8—C9 | 1.378 (6) | Cd1—N2 | 2.340 (3) |
| C8—H8 | 0.9300 | Cd1—Br1 | 2.5857 (6) |
| C9—C11 | 1.370 (6) | Cd1—Br2 | 2.5784 (6) |
| C9—C10 | 1.505 (6) | O1—S1 | 1.515 (3) |
| C10—H10A | 0.9600 | ||
| N1—C1—C2 | 123.8 (4) | C9—C11—H11 | 119.8 |
| N1—C1—H1 | 118.1 | C12—C11—H11 | 119.8 |
| C2—C1—H1 | 118.1 | N2—C12—C11 | 122.7 (4) |
| C1—C2—C3 | 118.8 (4) | N2—C12—H12 | 118.7 |
| C1—C2—H2 | 120.6 | C11—C12—H12 | 118.7 |
| C3—C2—H2 | 120.6 | S1—C13—H13A | 109.5 |
| C5—C3—C2 | 117.1 (4) | S1—C13—H13B | 109.5 |
| C5—C3—C4 | 121.0 (4) | H13A—C13—H13B | 109.5 |
| C2—C3—C4 | 121.9 (5) | S1—C13—H13C | 109.5 |
| C3—C4—H4A | 109.5 | H13A—C13—H13C | 109.5 |
| C3—C4—H4B | 109.5 | H13B—C13—H13C | 109.5 |
| H4A—C4—H4B | 109.5 | S1—C14—H14A | 109.5 |
| C3—C4—H4C | 109.5 | S1—C14—H14B | 109.5 |
| H4A—C4—H4C | 109.5 | H14A—C14—H14B | 109.5 |
| H4B—C4—H4C | 109.5 | S1—C14—H14C | 109.5 |
| C3—C5—C6 | 121.2 (4) | H14A—C14—H14C | 109.5 |
| C3—C5—H5 | 119.4 | H14B—C14—H14C | 109.5 |
| C6—C5—H5 | 119.4 | C1—N1—C6 | 118.3 (4) |
| N1—C6—C5 | 120.8 (4) | C1—N1—Cd1 | 124.0 (3) |
| N1—C6—C7 | 116.6 (3) | C6—N1—Cd1 | 117.7 (3) |
| C5—C6—C7 | 122.6 (3) | C12—N2—C7 | 118.1 (3) |
| N2—C7—C8 | 121.0 (4) | C12—N2—Cd1 | 123.6 (3) |
| N2—C7—C6 | 117.0 (3) | C7—N2—Cd1 | 118.1 (3) |
| C8—C7—C6 | 122.0 (4) | S1—O1—Cd1 | 121.1 (2) |
| C9—C8—C7 | 120.9 (4) | O1—S1—C13 | 103.6 (3) |
| C9—C8—H8 | 119.5 | O1—S1—C14 | 105.7 (3) |
| C7—C8—H8 | 119.5 | C13—S1—C14 | 99.3 (5) |
| C11—C9—C8 | 116.9 (4) | O1—Cd1—N2 | 82.34 (12) |
| C11—C9—C10 | 121.7 (4) | O1—Cd1—N1 | 144.06 (13) |
| C8—C9—C10 | 121.3 (4) | N2—Cd1—N1 | 70.41 (12) |
| C9—C10—H10A | 109.5 | O1—Cd1—Br2 | 98.54 (10) |
| C9—C10—H10B | 109.5 | N2—Cd1—Br2 | 103.45 (9) |
| H10A—C10—H10B | 109.5 | N1—Cd1—Br2 | 110.05 (9) |
| C9—C10—H10C | 109.5 | O1—Cd1—Br1 | 93.61 (10) |
| H10A—C10—H10C | 109.5 | N2—Cd1—Br1 | 142.22 (9) |
| H10B—C10—H10C | 109.5 | N1—Cd1—Br1 | 93.99 (8) |
| C9—C11—C12 | 120.3 (4) | Br2—Cd1—Br1 | 114.28 (2) |
| N1—C1—C2—C3 | −0.9 (8) | C8—C7—N2—C12 | −0.3 (6) |
| C1—C2—C3—C5 | −0.2 (7) | C6—C7—N2—C12 | 179.9 (4) |
| C1—C2—C3—C4 | −179.2 (5) | C8—C7—N2—Cd1 | −175.5 (3) |
| C2—C3—C5—C6 | 1.1 (7) | C6—C7—N2—Cd1 | 4.6 (5) |
| C4—C3—C5—C6 | −179.9 (5) | Cd1—O1—S1—C13 | 122.3 (5) |
| C3—C5—C6—N1 | −1.0 (7) | Cd1—O1—S1—C14 | −133.7 (3) |
| C3—C5—C6—C7 | 179.4 (4) | S1—O1—Cd1—N2 | −145.6 (3) |
| N1—C6—C7—N2 | −1.8 (6) | S1—O1—Cd1—N1 | 174.01 (19) |
| C5—C6—C7—N2 | 177.7 (4) | S1—O1—Cd1—Br2 | −43.1 (3) |
| N1—C6—C7—C8 | 178.4 (4) | S1—O1—Cd1—Br1 | 72.1 (3) |
| C5—C6—C7—C8 | −2.1 (6) | C12—N2—Cd1—O1 | 24.8 (4) |
| N2—C7—C8—C9 | 0.0 (7) | C7—N2—Cd1—O1 | −160.3 (3) |
| C6—C7—C8—C9 | 179.8 (4) | C12—N2—Cd1—N1 | −179.0 (4) |
| C7—C8—C9—C11 | 0.1 (7) | C7—N2—Cd1—N1 | −4.1 (3) |
| C7—C8—C9—C10 | −178.9 (5) | C12—N2—Cd1—Br2 | −72.2 (4) |
| C8—C9—C11—C12 | 0.1 (8) | C7—N2—Cd1—Br2 | 102.7 (3) |
| C10—C9—C11—C12 | 179.1 (5) | C12—N2—Cd1—Br1 | 110.8 (4) |
| C9—C11—C12—N2 | −0.4 (8) | C7—N2—Cd1—Br1 | −74.3 (4) |
| C2—C1—N1—C6 | 1.0 (7) | C1—N1—Cd1—O1 | −135.5 (4) |
| C2—C1—N1—Cd1 | −177.5 (4) | C6—N1—Cd1—O1 | 46.0 (4) |
| C5—C6—N1—C1 | 0.0 (6) | C1—N1—Cd1—N2 | −178.5 (4) |
| C7—C6—N1—C1 | 179.5 (4) | C6—N1—Cd1—N2 | 3.1 (3) |
| C5—C6—N1—Cd1 | 178.5 (3) | C1—N1—Cd1—Br2 | 83.9 (4) |
| C7—C6—N1—Cd1 | −1.9 (5) | C6—N1—Cd1—Br2 | −94.6 (3) |
| C11—C12—N2—C7 | 0.5 (7) | C1—N1—Cd1—Br1 | −33.8 (4) |
| C11—C12—N2—Cd1 | 175.5 (4) | C6—N1—Cd1—Br1 | 147.8 (3) |
| H··· | ||||
| C12—H12···O1 | 0.93 | 2.51 | 3.087 (5) | 120 |
Selected bond lengths (Å)
| Cd1—O1 | 2.301 (4) |
| Cd1—N1 | 2.349 (3) |
| Cd1—N2 | 2.340 (3) |
| Cd1—Br1 | 2.5857 (6) |
| Cd1—Br2 | 2.5784 (6) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C12—H12⋯O1 | 0.93 | 2.51 | 3.087 (5) | 120 |