Literature DB >> 21579009

(4,4'-Dimethyl-2,2'-bipyridine-κN,N')(dimethyl sulfoxide-κO)diiodidocadmium(II).

Khadijeh Kalateh1, Roya Ahmadi, Vahid Amani.   

Abstract

In the title compound, [CdI(2)(C(12)n class="Species">H(12)N(2))(C(2)H(6)OS)], the Cd(II) cation is coordinated by two N atoms from a dimethyl-bipyridine ligand, one O atom from a dimethyl sulfoxide mol-ecule and two I(-) anions in a distorted trigonal-bipyramidal geometry. Intra-molecular C-H⋯O hydrogen bonding and inter-molecular π-π stacking between parallel pyridine rings [centroid-centroid distance = 3.658 (3) Å] are present in the crystal structure.

Entities:  

Year:  2010        PMID: 21579009      PMCID: PMC2979279          DOI: 10.1107/S1600536810012572

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For metal complexes of 4,4′-dimethyl-2,2′-bipyridine, see: Ahmadi et al. (2008 ▶); Amani et al. (2009 ▶); Kalateh et al. (2008 ▶); Bellusci et al. (2008 ▶); Hojjat Kashani et al. (2008 ▶); Sakamoto et al. (2004 ▶); Sofetis et al. (2006 ▶); Willett et al. (2001 ▶); Yoshikawa et al. (2003 ▶); Yousefi et al. (2008 ▶).

Experimental

Crystal data

[CdI2(C12H12N2)(C2H6OS)] M = 628.58 Monoclinic, a = 8.729 (1) Å b = 15.5247 (18) Å c = 15.1354 (17) Å β = 102.620 (9)° V = 2001.5 (4) Å3 Z = 4 Mo Kα radiation μ = 4.28 mm−1 T = 298 K 0.49 × 0.30 × 0.28 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.002, T max = 0.055 15568 measured reflections 5360 independent reflections 4625 reflections with I > 2σ(I) R int = 0.082

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.172 S = 1.16 5360 reflections 195 parameters H-atom parameters constrained Δρmax = 2.10 e Å−3 Δρmin = −2.23 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810012572/xu2734sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012572/xu2734Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CdI2(C12H12N2)(C2H6OS)]F(000) = 1176
Mr = 628.58Dx = 2.086 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 887 reflections
a = 8.729 (1) Åθ = 1.9–29.3°
b = 15.5247 (18) ŵ = 4.28 mm1
c = 15.1354 (17) ÅT = 298 K
β = 102.620 (9)°Block, colorless
V = 2001.5 (4) Å30.49 × 0.30 × 0.28 mm
Z = 4
Bruker SMART CCD diffractometer5360 independent reflections
Radiation source: fine-focus sealed tube4625 reflections with I > 2σ(I)
graphiteRint = 0.082
φ and ω scansθmax = 29.2°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998)h = −11→11
Tmin = 0.002, Tmax = 0.055k = −21→20
15568 measured reflectionsl = −20→19
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.066H-atom parameters constrained
wR(F2) = 0.172w = 1/[σ2(Fo2) + (0.0903P)2 + 1.8883P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max = 0.015
5360 reflectionsΔρmax = 2.10 e Å3
195 parametersΔρmin = −2.23 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0171 (10)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.9509 (8)0.7934 (4)0.8795 (4)0.0575 (14)
H10.95290.77430.82160.069*
C21.0322 (8)0.7476 (4)0.9527 (5)0.0596 (14)
H21.08970.69910.94390.071*
C31.0280 (8)0.7741 (4)1.0397 (4)0.0584 (14)
C41.1139 (11)0.7258 (6)1.1206 (6)0.082 (2)
H4C1.13220.76301.17250.098*
H4B1.21260.70601.11010.098*
H4A1.05220.67731.13130.098*
C50.9435 (7)0.8469 (4)1.0476 (4)0.0499 (12)
H50.93830.86661.10490.060*
C60.8651 (5)0.8918 (3)0.9714 (3)0.0385 (9)
C70.7726 (5)0.9709 (3)0.9790 (3)0.0385 (9)
C80.7692 (6)1.0072 (4)1.0620 (3)0.0453 (10)
H80.82620.98251.11510.054*
C90.6794 (7)1.0810 (4)1.0656 (4)0.0488 (11)
C100.6735 (10)1.1201 (5)1.1561 (4)0.0679 (17)
H10A0.71881.17671.16030.081*
H10B0.73151.08461.20370.081*
H10C0.56631.12391.16170.081*
C110.5989 (8)1.1146 (4)0.9857 (4)0.0568 (13)
H110.53721.16350.98570.068*
C120.6086 (8)1.0764 (4)0.9054 (4)0.0545 (13)
H120.55461.10130.85170.065*
C130.411 (3)1.1614 (9)0.6212 (9)0.189 (11)
H13A0.36521.16750.67300.227*
H13B0.33651.17890.56770.227*
H13C0.50291.19710.62870.227*
C140.2811 (10)1.0103 (11)0.5584 (6)0.110 (4)
H14C0.29420.95100.54370.132*
H14B0.23831.04180.50400.132*
H14A0.21081.01410.59890.132*
N10.8687 (5)0.8647 (3)0.8888 (3)0.0471 (9)
N20.6925 (5)1.0048 (3)0.9006 (3)0.0439 (9)
O10.4994 (6)1.0216 (4)0.7072 (3)0.0664 (12)
Cd10.72703 (5)0.94561 (3)0.76515 (2)0.04529 (16)
I10.93442 (5)1.04931 (3)0.70096 (3)0.06676 (19)
I20.63195 (7)0.80423 (3)0.65550 (3)0.0758 (2)
S10.46338 (19)1.05399 (12)0.61041 (10)0.0574 (4)
U11U22U33U12U13U23
C10.068 (3)0.057 (3)0.046 (3)0.009 (3)0.008 (2)−0.013 (2)
C20.066 (3)0.056 (3)0.055 (3)0.014 (3)0.010 (3)−0.008 (3)
C30.062 (3)0.055 (3)0.056 (3)0.010 (3)0.007 (3)0.003 (3)
C40.094 (5)0.082 (5)0.063 (4)0.032 (4)0.006 (4)0.008 (4)
C50.055 (3)0.054 (3)0.038 (2)0.008 (2)0.005 (2)0.000 (2)
C60.038 (2)0.042 (2)0.036 (2)−0.0003 (16)0.0086 (16)0.0007 (18)
C70.037 (2)0.045 (2)0.033 (2)−0.0025 (17)0.0059 (16)−0.0002 (18)
C80.054 (3)0.050 (3)0.031 (2)0.003 (2)0.0069 (18)−0.0019 (19)
C90.055 (3)0.048 (3)0.045 (3)0.002 (2)0.013 (2)−0.003 (2)
C100.090 (5)0.070 (4)0.046 (3)0.011 (4)0.019 (3)−0.009 (3)
C110.068 (3)0.051 (3)0.050 (3)0.013 (3)0.010 (3)−0.004 (2)
C120.069 (3)0.055 (3)0.036 (2)0.014 (3)0.002 (2)0.002 (2)
C130.38 (3)0.084 (8)0.079 (7)0.051 (13)−0.012 (12)0.009 (6)
C140.061 (4)0.200 (13)0.063 (5)−0.027 (6)0.001 (4)−0.007 (7)
N10.050 (2)0.053 (2)0.038 (2)−0.0004 (18)0.0086 (17)−0.0057 (18)
N20.048 (2)0.048 (2)0.0333 (18)0.0019 (17)0.0039 (16)−0.0008 (17)
O10.059 (2)0.095 (4)0.042 (2)0.014 (2)0.0060 (18)0.010 (2)
Cd10.0492 (2)0.0532 (3)0.0323 (2)−0.00441 (14)0.00650 (14)−0.00210 (14)
I10.0659 (3)0.0866 (4)0.0452 (2)−0.0248 (2)0.00653 (18)0.01257 (19)
I20.0940 (4)0.0675 (3)0.0581 (3)−0.0181 (2)−0.0001 (2)−0.0193 (2)
S10.0532 (7)0.0810 (11)0.0364 (6)0.0013 (6)0.0061 (5)−0.0011 (6)
C1—N11.342 (8)C10—H10B0.9600
C1—C21.376 (9)C10—H10C0.9600
C1—H10.9300C11—C121.373 (8)
C2—C31.387 (9)C11—H110.9300
C2—H20.9300C12—N21.342 (8)
C3—C51.368 (8)C12—H120.9300
C3—C41.491 (9)C13—S11.746 (13)
C4—H4C0.9600C13—H13A0.9600
C4—H4B0.9600C13—H13B0.9600
C4—H4A0.9600C13—H13C0.9600
C5—C61.393 (7)C14—S11.751 (9)
C5—H50.9300C14—H14C0.9600
C6—N11.327 (6)C14—H14B0.9600
C6—C71.487 (7)C14—H14A0.9600
C7—N21.346 (6)Cd1—N12.366 (5)
C7—C81.384 (7)Cd1—N22.326 (4)
C8—C91.396 (8)O1—S11.515 (5)
C8—H80.9300Cd1—O12.313 (5)
C9—C111.363 (9)Cd1—I12.7535 (6)
C9—C101.508 (8)Cd1—I22.7674 (6)
C10—H10A0.9600
N1—C1—C2122.4 (6)C9—C11—H11120.0
N1—C1—H1118.8C12—C11—H11120.0
C2—C1—H1118.8N2—C12—C11123.1 (5)
C1—C2—C3119.6 (6)N2—C12—H12118.5
C1—C2—H2120.2C11—C12—H12118.5
C3—C2—H2120.2S1—C13—H13A109.5
C5—C3—C2117.0 (6)S1—C13—H13B109.5
C5—C3—C4121.8 (6)H13A—C13—H13B109.5
C2—C3—C4121.1 (6)S1—C13—H13C109.5
C3—C4—H4C109.5H13A—C13—H13C109.5
C3—C4—H4B109.5H13B—C13—H13C109.5
H4C—C4—H4B109.5S1—C14—H14C109.5
C3—C4—H4A109.5S1—C14—H14B109.5
H4C—C4—H4A109.5H14C—C14—H14B109.5
H4B—C4—H4A109.5S1—C14—H14A109.5
C3—C5—C6121.2 (5)H14C—C14—H14A109.5
C3—C5—H5119.4H14B—C14—H14A109.5
C6—C5—H5119.4C6—N1—C1118.9 (5)
N1—C6—C5120.9 (5)C6—N1—Cd1117.5 (4)
N1—C6—C7117.4 (4)C1—N1—Cd1123.6 (4)
C5—C6—C7121.8 (4)C12—N2—C7117.5 (5)
N2—C7—C8122.1 (5)C12—N2—Cd1123.5 (3)
N2—C7—C6116.2 (4)C7—N2—Cd1118.7 (3)
C8—C7—C6121.7 (4)S1—O1—Cd1121.0 (3)
C7—C8—C9119.6 (5)O1—Cd1—N282.36 (16)
C7—C8—H8120.2O1—Cd1—N1145.92 (16)
C9—C8—H8120.2N2—Cd1—N170.02 (16)
C11—C9—C8117.7 (5)O1—Cd1—I198.31 (14)
C11—C9—C10122.5 (6)N2—Cd1—I1107.57 (12)
C8—C9—C10119.8 (5)N1—Cd1—I1108.61 (12)
C9—C10—H10A109.5O1—Cd1—I293.25 (14)
C9—C10—H10B109.5N2—Cd1—I2139.68 (12)
H10A—C10—H10B109.5N1—Cd1—I295.15 (12)
C9—C10—H10C109.5I1—Cd1—I2112.72 (2)
H10A—C10—H10C109.5O1—S1—C13103.3 (5)
H10B—C10—H10C109.5O1—S1—C14106.4 (5)
C9—C11—C12120.0 (6)C13—S1—C14100.5 (9)
N1—C1—C2—C31.3 (11)C8—C7—N2—C120.5 (8)
C1—C2—C3—C5−1.2 (11)C6—C7—N2—C12−179.7 (5)
C1—C2—C3—C4179.6 (8)C8—C7—N2—Cd1174.2 (4)
C2—C3—C5—C60.2 (10)C6—C7—N2—Cd1−6.0 (6)
C4—C3—C5—C6179.4 (7)S1—O1—Cd1—N2152.1 (4)
C3—C5—C6—N10.8 (9)S1—O1—Cd1—N1−172.4 (3)
C3—C5—C6—C7179.9 (6)S1—O1—Cd1—I145.3 (4)
N1—C6—C7—N24.0 (7)S1—O1—Cd1—I2−68.2 (4)
C5—C6—C7—N2−175.1 (5)C12—N2—Cd1—O1−22.7 (5)
N1—C6—C7—C8−176.1 (5)C7—N2—Cd1—O1164.0 (4)
C5—C6—C7—C84.8 (8)C12—N2—Cd1—N1177.6 (5)
N2—C7—C8—C90.4 (8)C7—N2—Cd1—N14.3 (4)
C6—C7—C8—C9−179.4 (5)C12—N2—Cd1—I173.7 (5)
C7—C8—C9—C11−0.4 (9)C7—N2—Cd1—I1−99.6 (4)
C7—C8—C9—C10179.2 (6)C12—N2—Cd1—I2−108.7 (5)
C8—C9—C11—C12−0.5 (10)C7—N2—Cd1—I278.0 (4)
C10—C9—C11—C12180.0 (7)C6—N1—Cd1—O1−39.9 (6)
C9—C11—C12—N21.5 (11)C1—N1—Cd1—O1139.8 (5)
C5—C6—N1—C1−0.8 (8)C6—N1—Cd1—N2−2.0 (4)
C7—C6—N1—C1−179.9 (5)C1—N1—Cd1—N2177.7 (5)
C5—C6—N1—Cd1179.0 (4)C6—N1—Cd1—I1100.5 (4)
C7—C6—N1—Cd1−0.2 (6)C1—N1—Cd1—I1−79.8 (5)
C2—C1—N1—C6−0.3 (10)C6—N1—Cd1—I2−143.5 (4)
C2—C1—N1—Cd1−180.0 (5)C1—N1—Cd1—I236.2 (5)
C11—C12—N2—C7−1.4 (10)Cd1—O1—S1—C13−131.6 (9)
C11—C12—N2—Cd1−174.8 (5)Cd1—O1—S1—C14123.1 (6)
D—H···AD—HH···AD···AD—H···A
C12—H12···O10.932.473.063 (8)122
Table 1

Selected bond lengths (Å)

Cd1—N12.366 (5)
Cd1—N22.326 (4)
Cd1—O12.313 (5)
Cd1—I12.7535 (6)
Cd1—I22.7674 (6)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12⋯O10.932.473.063 (8)122
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Crystal chemistry of the 4,4'-dimethyl-2,2'bipyridine/copper bromide system.

Authors:  R D Willett; G Pon; C Nagy
Journal:  Inorg Chem       Date:  2001-08-13       Impact factor: 5.165

3.  Tetra-chlorido(4,4'-dimethyl-2,2'-bipyridine-κN,N')platinum(IV).

Authors:  Leila Hojjat Kashani; Vahid Amani; Mohammad Yousefi; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-06-13

4.  Di-μ-bromido-bis-[bromido(4,4'-dimethyl-2,2'-bipyridine-κN,N')mercury(II)].

Authors:  Khadijeh Kalateh; Amin Ebadi; Roya Ahmadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15

5.  Trichlorido(4,4'-dimethyl-2,2'-bipyridine-κN,N')(dimethyl sulfoxide-κO)indium(III).

Authors:  Roya Ahmadi; Khadijeh Kalateh; Anita Abedi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-20

6.  (4,4'-Dimethyl-2,2'-bipyridine-κN,N')diiodidomercury(II).

Authors:  Mohammad Yousefi; Nasim Tadayon Pour; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13
  6 in total
  11 in total

1.  catena-Poly[[(5,5'-dimethyl-2,2'-bi-pyridine-κN,N')cadmium(II)]-di-μ-iodido].

Authors:  Roya Ahmadi; Khadijeh Kalateh; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-24

2.  (4,4'-Dimethyl-2,2'-bipyridine-κN,N')(dimethyl sulfoxide-κO)diiodidozinc(II).

Authors:  Mohammad Yousefi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-17

3.  Dibromido(4,4'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Robabeh Alizadeh; Parisa Mohammadi Eshlaghi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24

4.  Aqua-(4,4'-dimethyl-2,2'-bipyridine-κN,N')(nitrato-κO)(nitrato-κO,O')zinc.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30

5.  Bis[4-amino-N-(pyrimidin-2-yl-κN)benzene-sulfonamidato-κN](4,4'-di-methyl-2,2'-bipyridine-κN,N')cadmium dimethyl-formamide disolvate.

Authors:  G M Golzar Hossain; A J Amoroso
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10

6.  Dibromido(4,4'-dimethyl-2,2'-bipyridine-κ(2)N,N')(dimethyl sulfoxide-κO)cadmium.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-30

7.  cis-Chloridobis(4,4'-dimethyl-2,2'-bipyridine-κ(2)N,N')oxidovanadium(IV) chloride ethanol monosolvate monohydrate.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli; Elyas Golabi; Mohammad Amin Gholamzadeh
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-29

8.  catena-Poly[[(4,4'-dimethyl-2,2'-bipyridine-κ(2) N,N')cadmium]-di-μ-bromido].

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli; Fereydoon Khazali; Ali Borsalani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-17

9.  (4,4'-Dimethyl-2,2'-bipyridine-κ(2) N,N')(dimethyl-formamide-κO)diiodido-cadmium.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli; Fereydoon Khazali; Ali Borsalani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-17

10.  Trichlorido(4,4'-dimethyl-2,2'-bipyridine-κ(2)N,N')(methanol-κO)indium(III) methanol monosolvate.

Authors:  Sadif A Shirvan; Sara Haydari Dezfuli
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-23
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.