| Literature DB >> 22904773 |
Sadif A Shirvan1, Sara Haydari Dezfuli.
Abstract
In the title compound, [CdBr(2)(C(11)H(10)N(2))(C(2)H(6)OS)], the Cd(II) atom is five-coordinated in a distorted trigonal-bipyramidal geometry by two N atoms from a 6-methyl-2,2'-bipyridine ligand, one O atom from a dimethyl sulfoxide ligand and two Br atoms. An intra-molecular C-H⋯O hydrogen bond occurs. The crystal structure is stabilized by C-H⋯Br hydrogen bonds and π-π contacts between the pyridine rings [centroid-centroid distances = 3.582 (5) and 3.582 (5) Å].Entities:
Year: 2012 PMID: 22904773 PMCID: PMC3414166 DOI: 10.1107/S1600536812033168
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CdBr2(C11H10N2)(C2H6OS)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 14429 reflections |
| θ = 2.1–26.0° | |
| µ = 5.83 mm−1 | |
| β = 106.561 (5)° | Prism, colorless |
| 0.40 × 0.35 × 0.30 mm | |
| Bruker APEXII CCD diffractometer | 3487 independent reflections |
| Radiation source: fine-focus sealed tube | 2683 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 14429 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3487 reflections | (Δ/σ)max = 0.013 |
| 181 parameters | Δρmax = 1.35 e Å−3 |
| 0 restraints | Δρmin = −1.58 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0526 (15) | 0.2406 (9) | 0.7072 (8) | 0.095 (3) | |
| H1A | 0.1571 | 0.2589 | 0.7393 | 0.113* | |
| H1B | 0.0242 | 0.1907 | 0.7429 | 0.113* | |
| H1C | −0.0157 | 0.2916 | 0.7054 | 0.113* | |
| C2 | 0.0404 (10) | 0.2109 (6) | 0.6057 (7) | 0.065 (2) | |
| C3 | −0.0649 (10) | 0.2488 (7) | 0.5244 (8) | 0.076 (3) | |
| H3 | −0.1261 | 0.2979 | 0.5328 | 0.092* | |
| C4 | −0.0804 (11) | 0.2160 (8) | 0.4338 (9) | 0.081 (3) | |
| H4 | −0.1515 | 0.2420 | 0.3794 | 0.098* | |
| C5 | 0.0106 (10) | 0.1432 (7) | 0.4221 (7) | 0.067 (2) | |
| H5 | 0.0003 | 0.1189 | 0.3598 | 0.080* | |
| C6 | 0.1172 (8) | 0.1066 (5) | 0.5039 (5) | 0.0488 (16) | |
| C7 | 0.2177 (8) | 0.0275 (5) | 0.4957 (5) | 0.0489 (16) | |
| C8 | 0.2191 (11) | −0.0105 (7) | 0.4065 (6) | 0.068 (2) | |
| H8 | 0.1547 | 0.0137 | 0.3484 | 0.081* | |
| C9 | 0.3133 (12) | −0.0828 (7) | 0.4019 (8) | 0.074 (3) | |
| H9 | 0.3140 | −0.1083 | 0.3417 | 0.089* | |
| C10 | 0.4061 (11) | −0.1164 (6) | 0.4886 (8) | 0.071 (2) | |
| H10 | 0.4726 | −0.1652 | 0.4884 | 0.085* | |
| C11 | 0.4012 (10) | −0.0778 (5) | 0.5767 (7) | 0.0589 (19) | |
| H11 | 0.4628 | −0.1025 | 0.6354 | 0.071* | |
| C12 | 0.5881 (18) | −0.1426 (8) | 0.9498 (9) | 0.107 (4) | |
| H12A | 0.6375 | −0.1857 | 0.9173 | 0.129* | |
| H12B | 0.4818 | −0.1598 | 0.9392 | 0.129* | |
| H12C | 0.6399 | −0.1426 | 1.0193 | 0.129* | |
| C13 | 0.7939 (16) | −0.0279 (16) | 0.9055 (11) | 0.135 (6) | |
| H13A | 0.8121 | 0.0255 | 0.8706 | 0.162* | |
| H13B | 0.8204 | −0.0821 | 0.8751 | 0.162* | |
| H13C | 0.8565 | −0.0247 | 0.9728 | 0.162* | |
| N1 | 0.1290 (7) | 0.1384 (4) | 0.5931 (5) | 0.0517 (14) | |
| N2 | 0.3111 (7) | −0.0063 (4) | 0.5802 (4) | 0.0466 (13) | |
| Cd1 | 0.31578 (6) | 0.06461 (3) | 0.72653 (4) | 0.0479 (2) | |
| Br1 | 0.49691 (15) | 0.19974 (7) | 0.79147 (9) | 0.0879 (4) | |
| Br2 | 0.14174 (14) | −0.00070 (10) | 0.82432 (8) | 0.0931 (4) | |
| O1 | 0.5147 (9) | −0.0376 (5) | 0.7936 (5) | 0.0803 (19) | |
| S1 | 0.5972 (3) | −0.03236 (15) | 0.90188 (15) | 0.0594 (5) |
| C1 | 0.116 (9) | 0.091 (7) | 0.083 (7) | 0.038 (7) | 0.039 (7) | −0.005 (6) |
| C2 | 0.058 (5) | 0.066 (5) | 0.073 (5) | 0.013 (4) | 0.023 (4) | 0.007 (4) |
| C3 | 0.059 (5) | 0.075 (6) | 0.100 (8) | 0.024 (4) | 0.031 (5) | 0.027 (6) |
| C4 | 0.058 (5) | 0.097 (7) | 0.083 (7) | 0.013 (5) | 0.012 (5) | 0.025 (6) |
| C5 | 0.061 (5) | 0.078 (6) | 0.058 (5) | −0.001 (4) | 0.012 (4) | 0.009 (4) |
| C6 | 0.040 (3) | 0.061 (4) | 0.044 (4) | −0.008 (3) | 0.011 (3) | 0.007 (3) |
| C7 | 0.039 (4) | 0.057 (4) | 0.053 (4) | −0.008 (3) | 0.018 (3) | −0.002 (3) |
| C8 | 0.059 (5) | 0.096 (7) | 0.048 (4) | −0.011 (5) | 0.016 (4) | −0.014 (4) |
| C9 | 0.074 (6) | 0.086 (6) | 0.069 (6) | −0.009 (5) | 0.030 (5) | −0.031 (5) |
| C10 | 0.069 (5) | 0.057 (5) | 0.096 (7) | −0.006 (4) | 0.040 (5) | −0.026 (5) |
| C11 | 0.061 (5) | 0.043 (4) | 0.076 (5) | 0.002 (3) | 0.024 (4) | 0.000 (3) |
| C12 | 0.160 (13) | 0.088 (8) | 0.076 (7) | −0.006 (8) | 0.036 (8) | 0.005 (6) |
| C13 | 0.080 (8) | 0.24 (2) | 0.086 (8) | 0.027 (11) | 0.026 (7) | 0.010 (11) |
| N1 | 0.047 (3) | 0.059 (4) | 0.050 (3) | 0.006 (3) | 0.016 (3) | 0.004 (3) |
| N2 | 0.048 (3) | 0.050 (3) | 0.045 (3) | −0.007 (2) | 0.017 (3) | −0.005 (2) |
| Cd1 | 0.0532 (3) | 0.0472 (3) | 0.0421 (3) | −0.0042 (2) | 0.0116 (2) | −0.0013 (2) |
| Br1 | 0.1072 (9) | 0.0657 (6) | 0.0866 (7) | −0.0300 (5) | 0.0210 (6) | −0.0116 (5) |
| Br2 | 0.0902 (8) | 0.1284 (10) | 0.0644 (6) | −0.0346 (7) | 0.0277 (5) | 0.0009 (6) |
| O1 | 0.092 (5) | 0.075 (4) | 0.057 (3) | 0.029 (4) | −0.006 (3) | −0.006 (3) |
| S1 | 0.0658 (12) | 0.0625 (11) | 0.0515 (10) | 0.0095 (9) | 0.0194 (9) | −0.0025 (9) |
| C1—C2 | 1.472 (14) | C9—H9 | 0.9300 |
| C1—H1A | 0.9600 | C10—C11 | 1.378 (13) |
| C1—H1B | 0.9600 | C10—H10 | 0.9300 |
| C1—H1C | 0.9600 | C11—N2 | 1.329 (10) |
| C2—N1 | 1.365 (10) | C11—H11 | 0.9300 |
| C2—C3 | 1.381 (13) | C12—S1 | 1.752 (12) |
| C3—C4 | 1.337 (15) | C12—H12A | 0.9600 |
| C3—H3 | 0.9300 | C12—H12B | 0.9600 |
| C4—C5 | 1.378 (14) | C12—H12C | 0.9600 |
| C4—H4 | 0.9300 | C13—S1 | 1.761 (14) |
| C5—C6 | 1.383 (11) | C13—H13A | 0.9600 |
| C5—H5 | 0.9300 | C13—H13B | 0.9600 |
| C6—N1 | 1.320 (10) | C13—H13C | 0.9600 |
| C6—C7 | 1.489 (11) | N1—Cd1 | 2.396 (6) |
| C7—N2 | 1.345 (10) | N2—Cd1 | 2.303 (6) |
| C7—C8 | 1.380 (11) | Cd1—O1 | 2.316 (6) |
| C8—C9 | 1.366 (14) | Cd1—Br2 | 2.5530 (12) |
| C8—H8 | 0.9300 | Cd1—Br1 | 2.5539 (11) |
| C9—C10 | 1.364 (15) | O1—S1 | 1.502 (6) |
| C2—C1—H1A | 109.5 | N2—C11—H11 | 119.0 |
| C2—C1—H1B | 109.5 | C10—C11—H11 | 119.0 |
| H1A—C1—H1B | 109.5 | S1—C12—H12A | 109.5 |
| C2—C1—H1C | 109.5 | S1—C12—H12B | 109.5 |
| H1A—C1—H1C | 109.5 | H12A—C12—H12B | 109.5 |
| H1B—C1—H1C | 109.5 | S1—C12—H12C | 109.5 |
| N1—C2—C3 | 119.2 (9) | H12A—C12—H12C | 109.5 |
| N1—C2—C1 | 118.1 (8) | H12B—C12—H12C | 109.5 |
| C3—C2—C1 | 122.5 (9) | S1—C13—H13A | 109.5 |
| C4—C3—C2 | 121.0 (9) | S1—C13—H13B | 109.5 |
| C4—C3—H3 | 119.5 | H13A—C13—H13B | 109.5 |
| C2—C3—H3 | 119.5 | S1—C13—H13C | 109.5 |
| C3—C4—C5 | 119.1 (9) | H13A—C13—H13C | 109.5 |
| C3—C4—H4 | 120.5 | H13B—C13—H13C | 109.5 |
| C5—C4—H4 | 120.5 | C6—N1—C2 | 120.4 (7) |
| C4—C5—C6 | 119.5 (9) | C6—N1—Cd1 | 116.3 (5) |
| C4—C5—H5 | 120.3 | C2—N1—Cd1 | 123.3 (6) |
| C6—C5—H5 | 120.3 | C11—N2—C7 | 119.2 (7) |
| N1—C6—C5 | 120.7 (8) | C11—N2—Cd1 | 122.0 (6) |
| N1—C6—C7 | 117.4 (6) | C7—N2—Cd1 | 118.8 (5) |
| C5—C6—C7 | 121.8 (7) | N2—Cd1—O1 | 83.9 (2) |
| N2—C7—C8 | 119.9 (8) | N2—Cd1—N1 | 70.4 (2) |
| N2—C7—C6 | 117.0 (6) | O1—Cd1—N1 | 154.1 (2) |
| C8—C7—C6 | 123.0 (8) | N2—Cd1—Br2 | 117.63 (15) |
| C9—C8—C7 | 121.4 (9) | O1—Cd1—Br2 | 93.6 (2) |
| C9—C8—H8 | 119.3 | N1—Cd1—Br2 | 101.02 (15) |
| C7—C8—H8 | 119.3 | N2—Cd1—Br1 | 120.97 (14) |
| C10—C9—C8 | 117.6 (8) | O1—Cd1—Br1 | 90.3 (2) |
| C10—C9—H9 | 121.2 | N1—Cd1—Br1 | 99.92 (16) |
| C8—C9—H9 | 121.2 | Br2—Cd1—Br1 | 121.36 (4) |
| C9—C10—C11 | 119.9 (9) | S1—O1—Cd1 | 119.1 (4) |
| C9—C10—H10 | 120.1 | O1—S1—C12 | 106.5 (5) |
| C11—C10—H10 | 120.1 | O1—S1—C13 | 103.5 (6) |
| N2—C11—C10 | 122.0 (9) | C12—S1—C13 | 100.4 (9) |
| N1—C2—C3—C4 | −0.5 (14) | C6—C7—N2—C11 | 179.0 (6) |
| C1—C2—C3—C4 | −175.4 (11) | C8—C7—N2—Cd1 | 176.3 (6) |
| C2—C3—C4—C5 | 0.1 (16) | C6—C7—N2—Cd1 | −3.1 (8) |
| C3—C4—C5—C6 | −1.0 (15) | C11—N2—Cd1—O1 | 3.9 (6) |
| C4—C5—C6—N1 | 2.4 (13) | C7—N2—Cd1—O1 | −174.0 (5) |
| C4—C5—C6—C7 | 179.6 (8) | C11—N2—Cd1—N1 | −179.4 (6) |
| N1—C6—C7—N2 | 1.1 (10) | C7—N2—Cd1—N1 | 2.7 (5) |
| C5—C6—C7—N2 | −176.2 (7) | C11—N2—Cd1—Br2 | −87.0 (6) |
| N1—C6—C7—C8 | −178.3 (7) | C7—N2—Cd1—Br2 | 95.1 (5) |
| C5—C6—C7—C8 | 4.4 (11) | C11—N2—Cd1—Br1 | 90.6 (6) |
| N2—C7—C8—C9 | 0.5 (12) | C7—N2—Cd1—Br1 | −87.3 (5) |
| C6—C7—C8—C9 | 179.8 (8) | C6—N1—Cd1—N2 | −2.1 (5) |
| C7—C8—C9—C10 | 0.0 (14) | C2—N1—Cd1—N2 | 179.5 (7) |
| C8—C9—C10—C11 | 0.7 (14) | C6—N1—Cd1—O1 | 5.5 (9) |
| C9—C10—C11—N2 | −1.9 (13) | C2—N1—Cd1—O1 | −173.0 (7) |
| C5—C6—N1—C2 | −2.8 (11) | C6—N1—Cd1—Br2 | −117.7 (5) |
| C7—C6—N1—C2 | 179.8 (7) | C2—N1—Cd1—Br2 | 63.9 (6) |
| C5—C6—N1—Cd1 | 178.6 (6) | C6—N1—Cd1—Br1 | 117.4 (5) |
| C7—C6—N1—Cd1 | 1.3 (8) | C2—N1—Cd1—Br1 | −61.1 (6) |
| C3—C2—N1—C6 | 1.9 (12) | N2—Cd1—O1—S1 | 177.1 (5) |
| C1—C2—N1—C6 | 177.0 (9) | N1—Cd1—O1—S1 | 169.9 (4) |
| C3—C2—N1—Cd1 | −179.7 (6) | Br2—Cd1—O1—S1 | −65.5 (5) |
| C1—C2—N1—Cd1 | −4.6 (12) | Br1—Cd1—O1—S1 | 55.9 (5) |
| C10—C11—N2—C7 | 2.4 (11) | Cd1—O1—S1—C12 | 126.0 (7) |
| C10—C11—N2—Cd1 | −175.5 (6) | Cd1—O1—S1—C13 | −128.7 (9) |
| C8—C7—N2—C11 | −1.6 (10) |
| H··· | ||||
| C11—H11···O1 | 0.93 | 2.35 | 3.003 (12) | 127 |
| C13—H13 | 0.96 | 2.89 | 3.722 (15) | 146 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C11—H11⋯O1 | 0.93 | 2.35 | 3.003 (12) | 127 |
| C13—H13 | 0.96 | 2.89 | 3.722 (15) | 146 |
Symmetry code: (i) .