Literature DB >> 22736221

Investigation of H-bonding and halogen-bonding effects in dichloroacetic acid: DFT calculations of NQR parameters and QTAIM analysis.

Mehdi D Esrafili1.   

Abstract

A theoretical study was performed to examine hydrogen and halogen bonds properties in gas phase and crystalline dichloroacetic acid (DCAA). The specific pattern of O-H∙∙∙O, C-H∙∙∙O, HCl, Cl∙∙∙O and Cl∙∙∙Cl interactions in DCAA dimers is described within the quantum theory of atoms in molecules (QTAIM) formalism. Based on QTAIM results, a partial covalent character is attributed to the O-H∙∙∙O hydrogen bonds in DCAA, whereas all the C-H∙∙∙O, Cl···O and Cl∙∙∙Cl intermolecular interactions are weak and basically electrostatic in nature. MP2/6-311++G** calculations indicate that the interaction energies for DCAA dimers lie in the range between -0.40 and -14.58 kcal mol(-1). One of the most important results of this study is that, according to energy decomposition analyses, halogen bonds are largely dependent on both electrostatic and dispersion interactions. For those nuclei participating in the hydrogen-bonding and halogen-bonding interactions, nuclear quadrupole coupling constants exhibit significant changes on going from the isolated molecule model to the crystalline DCAA. Of course, the magnitude of these changes at each nucleus depends directly on its amount of contribution to the interactions.

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Year:  2012        PMID: 22736221     DOI: 10.1007/s00894-012-1496-y

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  25 in total

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Authors:  Felipe A Bulat; Alejandro Toro-Labbé; Tore Brinck; Jane S Murray; Peter Politzer
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3.  The nature of halogen...halogen synthons: crystallographic and theoretical studies.

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4.  Sigma-hole bonding between like atoms; a fallacy of atomic charges.

Authors:  Peter Politzer; Jane S Murray; Monica C Concha
Journal:  J Mol Model       Date:  2008-03-04       Impact factor: 1.810

5.  Compressed hydrogen-bond effects in the pressure-frozen chloroacetic acid.

Authors:  Roman Gajda; Andrzej Katrusiak
Journal:  Acta Crystallogr B       Date:  2007-11-09

6.  Blue shifts vs red shifts in sigma-hole bonding.

Authors:  Jane S Murray; Monica C Concha; Pat Lane; Pavel Hobza; Peter Politzer
Journal:  J Mol Model       Date:  2008-04-26       Impact factor: 1.810

7.  Influence of N-H...O and C-H...O hydrogen bonds on the 17O NMR tensors in crystalline uracil: computational study.

Authors:  Ramsey Ida; Maurice De Clerk; Gang Wu
Journal:  J Phys Chem A       Date:  2006-01-26       Impact factor: 2.781

8.  Halogen bonding: the sigma-hole. Proceedings of "Modeling interactions in biomolecules II", Prague, September 5th-9th, 2005.

Authors:  Timothy Clark; Matthias Hennemann; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2006-08-23       Impact factor: 1.810

9.  Halogen bonds in biological molecules.

Authors:  Pascal Auffinger; Franklin A Hays; Eric Westhof; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-19       Impact factor: 11.205

10.  Br···O Complexes as Probes of Factors Affecting Halogen Bonding: Interactions of Bromobenzenes and Bromopyrimidines with Acetone.

Authors:  Kevin E Riley; Jane S Murray; Peter Politzer; Monica C Concha; Pavel Hobza
Journal:  J Chem Theory Comput       Date:  2008-12-18       Impact factor: 6.006

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  12 in total

1.  Topological insights into the 1/1 diacetyl/water complex gained using a new methodological approach.

Authors:  D Dargent; E L Zins; B Madebène; M E Alikhani
Journal:  J Mol Model       Date:  2015-07-30       Impact factor: 1.810

2.  CNXeCl and CNXeBr species as halogen bond donors: a quantum chemical study on the structure, properties, and nature of halogen···nitrogen interactions.

Authors:  Mehdi D Esrafili; Parisa Juyban
Journal:  J Mol Model       Date:  2014-03-29       Impact factor: 1.810

3.  Revealing substitution effects on the strength and nature of halogen-hydride interactions: a theoretical study.

Authors:  Mehdi D Esrafili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2013-06-23       Impact factor: 1.810

4.  Cooperativity between fluorine-centered halogen bonds: investigation of substituent effects.

Authors:  Mehdi D Esrafili; Mehdi D Esraili; Fariba Mohammadian-Sabet; Parvin Esmailpour; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2013-10-27       Impact factor: 1.810

5.  Theoretical study on cooperative effects between X⋯N and X⋯Carbene halogen bonds (X = F,Cl,Br and I).

Authors:  Mehdi D Esrafili; Fariba Mohammdain-Sabet; Parvin Esmailpour
Journal:  J Mol Model       Date:  2013-09-08       Impact factor: 1.810

6.  Theoretical study of the complementarity in halogen-bonded complexes involving nitrogen and halogen as negative sites.

Authors:  Mehdi D Esrafili; Mahshad Vakili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2014-02-13       Impact factor: 1.810

7.  Exploring surface reactivity of phosphorous-doped (6,0) and (4,4) BC3 nanotubes: a DFT study.

Authors:  Mohammad Alizadeh; Mehdi D Esrafili; Esmail Vessally
Journal:  J Mol Model       Date:  2013-09-17       Impact factor: 1.810

8.  Insights into the strength and nature of carbene···halogen bond interactions: a theoretical perspective.

Authors:  Mehdi D Esrafili; Nafiseh Mohammadirad
Journal:  J Mol Model       Date:  2013-03-02       Impact factor: 1.810

9.  A theoretical investigation of the characteristics of hydrogen/halogen bonding interactions in dibromo-nitroaniline.

Authors:  Mehdi D Esrafili
Journal:  J Mol Model       Date:  2012-12-08       Impact factor: 1.810

10.  Characterization of halogen···halogen interactions in crystalline dihalomethane compounds (CH2Cl2, CH2Br2 and CH2I2): a theoretical study.

Authors:  Mehdi D Esrafili; Mahshad Vakili; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2014-02-11       Impact factor: 1.810

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