Literature DB >> 22590392

2-Amino-4-nitro-phenol-1-(2,4,6-trihy-droxy-phen-yl)ethanone (1/1).

Can Kocabıyık, Hümeyra Paşaoğlu, Taşkın Basılı, Erbil Ağar.   

Abstract

In the title compound, C(6)H(6)N(2)O(3)·C(8)H(8)O(4), the 2-amino-4-nitro-phenol (ANP) and 1-(2,4,6-trihy-droxy-phen-yl)ethanone (THA) mol-ecules are both nearly planar, with r.m.s. deviations of 0.0630 and 0.0313 Å, respectively. The angle between the least-squares planes of THA and ANP is 48.99 (2)°. In THA, an intra-molecular O-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal, N-H⋯O, O-H⋯O and O-H⋯N hydrogen bonds lead to the formation of a three-dimensional network. There are also inter-molecular π-π inter-actions between the benzene rings of ANP-ANP and of THA-THA mol-ecules, with centroid-centroid distances of 3.5313 (14) and 3.8440 (16) Å, respectively. Weak C-O⋯π and N-O⋯π inter-actions also occur.

Entities:  

Year:  2012        PMID: 22590392      PMCID: PMC3344630          DOI: 10.1107/S1600536812017497

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of nitro­aromatics as inter­mediates in explosives, dyestuffs, pesticides and organic synthesis, see: Yan et al. (2006 ▶). For the occurrence of nitro­aromatics in industrial wastes and as direct pollutants in the environment, see: Yan et al. (2006 ▶); Soojhawon et al. (2005 ▶). For graph-set motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Tanak et al. (2009 ▶, 2010 ▶); Ali et al. (2008 ▶); Bi et al. (2009 ▶); Garden et al. (2004 ▶); Serdiuk et al. (2011 ▶).

Experimental

Crystal data

C6H6N2O3·C8H8O4 M = 322.27 Monoclinic, a = 7.7255 (6) Å b = 13.2184 (11) Å c = 15.8335 (12) Å β = 118.148 (5)° V = 1425.67 (19) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 296 K 0.80 × 0.35 × 0.09 mm

Data collection

Stoe IPDS 2 diffractometer Absorption correction: integration (X-RED; Stoe & Cie, 2002 ▶) T min = 0.942, T max = 0.992 15333 measured reflections 2961 independent reflections 1841 reflections with I > 2σ(I) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.098 S = 0.97 2961 reflections 252 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.24 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812017497/kj2199sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812017497/kj2199Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812017497/kj2199Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H6N2O3·C8H8O4F(000) = 672
Mr = 322.27Dx = 1.501 Mg m3
Monoclinic, P2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ycCell parameters from 12619 reflections
a = 7.7255 (6) Åθ = 2.1–27.3°
b = 13.2184 (11) ŵ = 0.12 mm1
c = 15.8335 (12) ÅT = 296 K
β = 118.148 (5)°Prism, yellow
V = 1425.67 (19) Å30.80 × 0.35 × 0.09 mm
Z = 4
Stoe IPDS 2 diffractometer2961 independent reflections
Radiation source: fine-focus sealed tube1841 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.065
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 2.1°
rotation method scansh = −9→9
Absorption correction: integration (X-RED; Stoe & Cie, 2002)k = −16→16
Tmin = 0.942, Tmax = 0.992l = −19→19
15333 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.098H atoms treated by a mixture of independent and constrained refinement
S = 0.97w = 1/[σ2(Fo2) + (0.0466P)2] where P = (Fo2 + 2Fc2)/3
2961 reflections(Δ/σ)max < 0.001
252 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.24 e Å3
Experimental. IR (KBr, cm-1): 3523 ν(OH)THA, 3383 ν(NH2)asym, 3353 ν(NH2)sym+ν(OH)THA, 3298 ν(OH)THA, 3090–3000 ν(CH), 2850–2700 ν(CH3), 1628 ν(C=O)+δ(OH)THA+ν(ring)THA, 1614 ν(NH2)+ν(ring)ANP, 1571 δ(NH2), 1524 ν(NO2)asym, 1496–1476 δ(CH)+δ(OH)ANP, 1364–1339 δ(CH3)+δ(OH)THA, 1311–1251 ν(NO2)+ν(CO)ANP, 1203–1167–1147 ν(ring)+δ(OH). UV/Visible (nm): 226 (2,212 Å; ε= 19230 L mol-1cm-1) and 288 (1,815 Å; ε= 15780 L mol-1cm-1) π→π* transitions of benzene ring (E bands), 380 nm (0,345 Å; ε= 3000 L mol-1cm-1) π→π* transition of aniline (E2 band).
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5977 (3)0.40750 (14)0.66694 (13)0.0394 (5)
C20.6191 (4)0.51128 (15)0.67342 (16)0.0498 (6)
C30.7703 (4)0.55477 (16)0.75249 (17)0.0520 (6)
C40.8964 (3)0.49206 (15)0.82522 (14)0.0456 (5)
C50.8776 (3)0.38806 (15)0.82066 (14)0.0411 (5)
C60.7271 (3)0.34480 (13)0.74077 (13)0.0361 (4)
C70.7798 (3)0.00373 (15)0.64563 (14)0.0411 (5)
C80.7390 (3)−0.09742 (14)0.62254 (14)0.0423 (5)
C90.7120 (3)−0.13396 (15)0.53533 (15)0.0461 (5)
C100.7236 (3)−0.06837 (14)0.47110 (13)0.0409 (5)
C110.7631 (3)0.03665 (14)0.49051 (13)0.0380 (5)
C120.7933 (3)0.06963 (14)0.58187 (14)0.0395 (5)
C130.7601 (3)0.10280 (15)0.41713 (15)0.0466 (5)
C140.7792 (5)0.21463 (17)0.42704 (19)0.0779 (9)
H14A0.77310.24320.37000.117*
H14B0.90270.23160.48100.117*
H14C0.67420.24140.43650.117*
N11.0593 (3)0.53726 (17)0.90766 (15)0.0622 (6)
N20.7059 (3)0.23928 (13)0.72998 (14)0.0473 (5)
O11.0834 (3)0.62880 (15)0.91011 (15)0.0944 (7)
O21.1715 (3)0.48199 (16)0.97227 (13)0.0774 (6)
O30.4543 (3)0.35925 (12)0.59151 (11)0.0571 (5)
O40.8398 (3)0.16790 (11)0.60576 (12)0.0587 (5)
O50.7222 (3)−0.16375 (12)0.68295 (12)0.0640 (5)
O60.6904 (3)−0.10661 (12)0.38519 (11)0.0579 (5)
O70.7370 (3)0.06669 (11)0.33974 (10)0.0605 (5)
H20.532 (3)0.5607 (15)0.6211 (15)0.053 (6)*
H2A0.764 (3)0.2079 (17)0.7899 (18)0.061 (7)*
H2B0.575 (4)0.2194 (19)0.692 (2)0.078 (9)*
H30.790 (3)0.6232 (17)0.7574 (15)0.050 (6)*
H3A0.375 (5)0.404 (2)0.556 (2)0.100 (11)*
H40.812 (4)0.1827 (18)0.6505 (19)0.063 (8)*
H50.963 (3)0.3471 (14)0.8687 (15)0.042 (6)*
H5A0.734 (4)−0.134 (2)0.735 (2)0.093 (10)*
H60.702 (4)−0.0539 (18)0.3500 (18)0.067 (8)*
H70.802 (3)0.0289 (14)0.7084 (14)0.041 (5)*
H90.691 (3)−0.2043 (18)0.5206 (16)0.060 (6)*
U11U22U33U12U13U23
C10.0367 (12)0.0479 (11)0.0311 (10)−0.0011 (9)0.0139 (9)−0.0043 (8)
C20.0508 (15)0.0448 (12)0.0474 (13)0.0077 (10)0.0178 (12)0.0048 (10)
C30.0570 (16)0.0380 (12)0.0619 (15)0.0002 (10)0.0287 (13)−0.0089 (10)
C40.0387 (13)0.0540 (12)0.0407 (11)−0.0053 (10)0.0161 (10)−0.0169 (9)
C50.0402 (13)0.0514 (12)0.0298 (10)0.0053 (10)0.0149 (10)−0.0007 (9)
C60.0402 (12)0.0384 (10)0.0328 (10)0.0000 (8)0.0199 (9)−0.0029 (8)
C70.0444 (13)0.0483 (11)0.0307 (10)−0.0019 (9)0.0178 (10)−0.0075 (8)
C80.0452 (14)0.0439 (11)0.0382 (11)0.0033 (9)0.0199 (10)0.0011 (8)
C90.0573 (15)0.0368 (11)0.0455 (12)−0.0008 (9)0.0254 (11)−0.0066 (9)
C100.0435 (13)0.0450 (11)0.0325 (10)0.0013 (9)0.0165 (9)−0.0100 (8)
C110.0346 (12)0.0460 (11)0.0335 (10)−0.0017 (9)0.0163 (9)−0.0056 (8)
C120.0374 (13)0.0435 (10)0.0381 (11)−0.0055 (9)0.0183 (9)−0.0108 (8)
C130.0477 (14)0.0534 (12)0.0426 (12)−0.0058 (10)0.0245 (11)−0.0056 (9)
C140.126 (3)0.0560 (14)0.0640 (17)−0.0166 (15)0.0552 (18)0.0019 (12)
N10.0463 (14)0.0798 (15)0.0543 (13)−0.0063 (11)0.0188 (11)−0.0278 (11)
N20.0591 (14)0.0416 (10)0.0385 (10)−0.0016 (9)0.0208 (10)0.0011 (8)
O10.0808 (15)0.0721 (12)0.1081 (17)−0.0231 (10)0.0262 (12)−0.0512 (11)
O20.0540 (12)0.1078 (14)0.0477 (10)−0.0066 (11)0.0053 (9)−0.0182 (10)
O30.0502 (11)0.0598 (10)0.0398 (9)−0.0014 (8)0.0035 (8)−0.0051 (7)
O40.0895 (14)0.0454 (8)0.0572 (10)−0.0206 (8)0.0477 (10)−0.0197 (7)
O50.1024 (15)0.0491 (8)0.0503 (10)−0.0017 (8)0.0441 (10)0.0014 (7)
O60.0865 (13)0.0525 (9)0.0414 (8)−0.0089 (8)0.0358 (9)−0.0143 (7)
O70.0853 (13)0.0634 (9)0.0410 (8)−0.0037 (8)0.0366 (9)−0.0027 (7)
C1—O31.346 (2)C10—O61.357 (2)
C1—C21.380 (3)C10—C111.424 (3)
C1—C61.396 (3)C11—C121.421 (3)
C2—C31.372 (3)C11—C131.445 (3)
C2—H21.02 (2)C12—O41.353 (2)
C3—C41.380 (3)C13—O71.247 (2)
C3—H30.91 (2)C13—C141.487 (3)
C4—C51.381 (3)C14—H14A0.9600
C4—N11.447 (3)C14—H14B0.9600
C5—C61.375 (3)C14—H14C0.9600
C5—H50.91 (2)N1—O11.222 (3)
C6—N21.405 (2)N1—O21.222 (3)
C7—C121.374 (3)N2—H2A0.93 (3)
C7—C81.383 (3)N2—H2B0.93 (3)
C7—H70.98 (2)O3—H3A0.84 (3)
C8—O51.348 (2)O4—H40.86 (3)
C8—C91.383 (3)O5—H5A0.88 (3)
C9—C101.371 (3)O6—H60.92 (3)
C9—H90.95 (2)
O3—C1—C2123.81 (19)O6—C10—C11119.96 (18)
O3—C1—C6115.21 (17)C9—C10—C11122.61 (18)
C2—C1—C6120.98 (19)C12—C11—C10115.75 (17)
C3—C2—C1120.3 (2)C12—C11—C13124.43 (17)
C3—C2—H2115.1 (11)C10—C11—C13119.73 (17)
C1—C2—H2124.5 (11)O4—C12—C7120.34 (17)
C2—C3—C4118.2 (2)O4—C12—C11118.28 (17)
C2—C3—H3121.8 (13)C7—C12—C11121.37 (17)
C4—C3—H3120.0 (14)O7—C13—C11119.92 (17)
C3—C4—C5122.63 (19)O7—C13—C14116.4 (2)
C3—C4—N1118.4 (2)C11—C13—C14123.62 (19)
C5—C4—N1118.9 (2)C13—C14—H14A109.5
C6—C5—C4118.97 (19)C13—C14—H14B109.5
C6—C5—H5119.0 (12)H14A—C14—H14B109.5
C4—C5—H5122.0 (12)C13—C14—H14C109.5
C5—C6—C1118.94 (17)H14A—C14—H14C109.5
C5—C6—N2121.59 (19)H14B—C14—H14C109.5
C1—C6—N2119.41 (18)O1—N1—O2121.9 (2)
C12—C7—C8120.37 (18)O1—N1—C4119.5 (2)
C12—C7—H7119.3 (11)O2—N1—C4118.7 (2)
C8—C7—H7120.3 (11)C6—N2—H2A110.2 (14)
O5—C8—C9117.50 (17)C6—N2—H2B112.7 (16)
O5—C8—C7121.84 (18)H2A—N2—H2B112 (2)
C9—C8—C7120.66 (19)C1—O3—H3A107 (2)
C10—C9—C8119.21 (18)C12—O4—H4108.3 (16)
C10—C9—H9119.9 (14)C8—O5—H5A112.0 (19)
C8—C9—H9120.9 (14)C10—O6—H6107.3 (15)
O6—C10—C9117.41 (17)
O3—C1—C2—C3−179.5 (2)O6—C10—C11—C12179.20 (18)
C6—C1—C2—C30.9 (4)C9—C10—C11—C121.0 (3)
C1—C2—C3—C4−1.2 (4)O6—C10—C11—C132.4 (3)
C2—C3—C4—C50.9 (3)C9—C10—C11—C13−175.8 (2)
C2—C3—C4—N1178.3 (2)C8—C7—C12—O4−177.8 (2)
C3—C4—C5—C6−0.2 (3)C8—C7—C12—C111.0 (3)
N1—C4—C5—C6−177.64 (19)C10—C11—C12—O4177.22 (19)
C4—C5—C6—C1−0.2 (3)C13—C11—C12—O4−6.2 (3)
C4—C5—C6—N2177.0 (2)C10—C11—C12—C7−1.6 (3)
O3—C1—C6—C5−179.80 (19)C13—C11—C12—C7175.0 (2)
C2—C1—C6—C5−0.1 (3)C12—C11—C13—O7178.3 (2)
O3—C1—C6—N23.0 (3)C10—C11—C13—O7−5.2 (3)
C2—C1—C6—N2−177.3 (2)C12—C11—C13—C14−2.9 (4)
C12—C7—C8—O5−179.1 (2)C10—C11—C13—C14173.5 (2)
C12—C7—C8—C90.3 (3)C3—C4—N1—O1−1.4 (3)
O5—C8—C9—C10178.5 (2)C5—C4—N1—O1176.1 (2)
C7—C8—C9—C10−0.8 (3)C3—C4—N1—O2−180.0 (2)
C8—C9—C10—O6−178.1 (2)C5—C4—N1—O2−2.5 (3)
C8—C9—C10—C110.2 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O6i0.93 (3)2.28 (3)3.067 (2)141.5 (19)
N2—H2B···O6ii0.93 (3)2.36 (3)3.241 (3)157 (2)
O3—H3A···N1iii0.84 (3)2.59 (3)3.358 (3)153 (3)
O3—H3A···O1iii0.84 (3)2.39 (3)2.953 (3)125 (3)
O3—H3A···O2iii0.84 (3)2.13 (3)2.975 (3)178 (3)
O4—H4···N20.86 (3)1.94 (3)2.784 (2)166 (2)
O5—H5A···O7i0.88 (3)1.87 (3)2.748 (2)175 (3)
O6—H6···O70.92 (3)1.64 (3)2.478 (2)150 (2)
N1—O2···Cg2iv1.22 (1)3.82 (1)3.599 (3)70 (1)
C13—O7···Cg1v1.25 (1)3.52 (1)3.722 (3)89 (1)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C7–C12 and C1–C6 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O6i0.93 (3)2.28 (3)3.067 (2)141.5 (19)
N2—H2B⋯O6ii0.93 (3)2.36 (3)3.241 (3)157 (2)
O3—H3A⋯N1iii0.84 (3)2.59 (3)3.358 (3)153 (3)
O3—H3A⋯O1iii0.84 (3)2.39 (3)2.953 (3)125 (3)
O3—H3A⋯O2iii0.84 (3)2.13 (3)2.975 (3)178 (3)
O4—H4⋯N20.86 (3)1.94 (3)2.784 (2)166 (2)
O5—H5A⋯O7i0.88 (3)1.87 (3)2.748 (2)175 (3)
O6—H6⋯O70.92 (3)1.64 (3)2.478 (2)150 (2)
N1—O2⋯Cg2iv1.22 (1)3.82 (1)3.599 (3)70 (1)
C13—O7⋯Cg1v1.25 (1)3.52 (1)3.722 (3)89 (1)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-[2-(1H-indol-3-yl)ethyl-iminiomethyl]-4-nitro-phenolate.

Authors:  Hapipah M Ali; M I Mohamed Mustafa; M Razali Rizal; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26

3.  2-Amino-4-nitro-phenol monohydrate.

Authors:  Hasan Tanak; Ferda Erşahin; Metin Yavuz; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-11

4.  Three-dimensional aggregation in 2-hydroxy-3-iodo-5-nitrobenzaldehyde involving C-H...O, iodo-nitro and aromatic pi-pi stacking interactions, and isolated dimers in disordered 2,4-diiodo-6-nitroanisole.

Authors:  Simon J Garden; Fernando R da Cunha; Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2003-12-06       Impact factor: 1.172

5.  2-Hydr-oxy-5-nitro-benzaldehyde.

Authors:  Hasan Tanak; Mustafa Macit; Metin Yavuz; Samil Işık
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-11

6.  2-Methyl-4-nitro-phenol.

Authors:  Sheng Bi; Yong-Zhong Wu; Yi-Xin Zhou; Jian-Guo Tang; Cheng Guo
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-23
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.