| Literature DB >> 21202395 |
Hapipah M Ali1, M I Mohamed Mustafa, M Razali Rizal, Seik Weng Ng.
Abstract
The title Schiff base, C(17)H(15)N(3)O(3), exists in the zwitterionic form with the phenol H atom transferred to the imine group. Adjacent zwitterions are linked into a linear chain running along the a axis by an indole-hydr-oxy N-H⋯O hydrogen bond [3.100 (2) Å].Entities:
Year: 2008 PMID: 21202395 PMCID: PMC2961249 DOI: 10.1107/S1600536808011185
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H15N3O3 | |
| Monoclinic, | Mo |
| Hall symbol: -c 2yc | Cell parameters from 2068 reflections |
| θ = 5.1–59.5° | |
| µ = 0.10 mm−1 | |
| β = 95.712 (2)° | Irregular, yellow |
| 0.51 × 0.30 × 0.19 mm | |
| Bruker APEXII diffractometer | 2403 reflections with |
| Radiation source: medium-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 1.9° |
| φ and ω scans | |
| 6383 measured reflections | |
| 3312 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3312 reflections | (Δ/σ)max = 0.001 |
| 216 parameters | Δρmax = 1.18 e Å−3 |
| 2 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O1 | 0.60196 (9) | 0.52975 (15) | 0.49373 (6) | 0.0348 (3) | |
| O2 | 1.01389 (10) | 0.6546 (2) | 0.56727 (9) | 0.0596 (5) | |
| O3 | 0.95763 (10) | 0.75509 (18) | 0.64477 (7) | 0.0501 (5) | |
| N1 | 0.94781 (11) | 0.68697 (19) | 0.59563 (8) | 0.0377 (4) | |
| N2 | 0.53650 (11) | 0.61992 (16) | 0.59452 (7) | 0.0278 (4) | |
| N3 | 0.16678 (11) | 0.81046 (17) | 0.64386 (8) | 0.0308 (4) | |
| C1 | 0.68118 (12) | 0.56415 (18) | 0.51803 (8) | 0.0254 (4) | |
| C2 | 0.76150 (13) | 0.54714 (19) | 0.48512 (8) | 0.0286 (4) | |
| H2 | 0.7547 | 0.5085 | 0.4442 | 0.034* | |
| C3 | 0.84661 (13) | 0.58457 (19) | 0.51059 (9) | 0.0283 (4) | |
| H3 | 0.8986 | 0.5705 | 0.4880 | 0.034* | |
| C4 | 0.85759 (12) | 0.64418 (19) | 0.57044 (9) | 0.0273 (4) | |
| C5 | 0.78428 (12) | 0.66384 (18) | 0.60489 (8) | 0.0258 (4) | |
| H5 | 0.7935 | 0.7037 | 0.6455 | 0.031* | |
| C6 | 0.69633 (12) | 0.62481 (18) | 0.57975 (8) | 0.0241 (4) | |
| C7 | 0.62047 (12) | 0.65009 (18) | 0.61477 (8) | 0.0258 (4) | |
| H7 | 0.6321 | 0.6911 | 0.6550 | 0.031* | |
| C8 | 0.45617 (12) | 0.6528 (2) | 0.62664 (9) | 0.0285 (4) | |
| H8A | 0.4761 | 0.6835 | 0.6698 | 0.034* | |
| H8B | 0.4177 | 0.5675 | 0.6288 | 0.034* | |
| C9 | 0.39951 (13) | 0.7694 (2) | 0.59244 (9) | 0.0303 (4) | |
| H9A | 0.4375 | 0.8556 | 0.5918 | 0.036* | |
| H9B | 0.3823 | 0.7402 | 0.5487 | 0.036* | |
| C10 | 0.31404 (12) | 0.80148 (19) | 0.62293 (8) | 0.0253 (4) | |
| C11 | 0.22563 (13) | 0.77101 (19) | 0.60122 (9) | 0.0298 (4) | |
| H11 | 0.2072 | 0.7284 | 0.5621 | 0.036* | |
| C12 | 0.21685 (12) | 0.86790 (19) | 0.69435 (9) | 0.0269 (4) | |
| C13 | 0.18875 (15) | 0.9262 (2) | 0.74883 (10) | 0.0391 (5) | |
| H13 | 0.1259 | 0.9262 | 0.7567 | 0.047* | |
| C14 | 0.25584 (18) | 0.9837 (3) | 0.79057 (10) | 0.0482 (6) | |
| H14 | 0.2387 | 1.0238 | 0.8281 | 0.058* | |
| C15 | 0.34794 (18) | 0.9848 (2) | 0.77940 (10) | 0.0467 (6) | |
| H15 | 0.3923 | 1.0267 | 0.8090 | 0.056* | |
| C16 | 0.37574 (14) | 0.9260 (2) | 0.72603 (9) | 0.0349 (5) | |
| H16 | 0.4389 | 0.9265 | 0.7188 | 0.042* | |
| C17 | 0.30999 (12) | 0.86553 (18) | 0.68270 (8) | 0.0240 (4) | |
| H2N | 0.5301 (16) | 0.578 (2) | 0.5578 (6) | 0.047 (7)* | |
| H3N | 0.1078 (8) | 0.790 (3) | 0.6400 (11) | 0.052 (7)* |
| O1 | 0.0221 (7) | 0.0421 (8) | 0.0390 (8) | −0.0044 (6) | −0.0020 (6) | −0.0080 (6) |
| O2 | 0.0177 (8) | 0.0831 (13) | 0.0789 (12) | −0.0053 (8) | 0.0097 (8) | −0.0235 (10) |
| O3 | 0.0286 (9) | 0.0690 (12) | 0.0514 (9) | −0.0109 (8) | −0.0022 (7) | −0.0173 (8) |
| N1 | 0.0197 (9) | 0.0436 (10) | 0.0493 (10) | −0.0028 (7) | 0.0012 (7) | −0.0020 (8) |
| N2 | 0.0194 (8) | 0.0308 (8) | 0.0334 (8) | 0.0039 (6) | 0.0040 (6) | −0.0015 (6) |
| N3 | 0.0162 (8) | 0.0303 (8) | 0.0452 (9) | −0.0007 (6) | 0.0001 (7) | −0.0016 (7) |
| C1 | 0.0211 (9) | 0.0229 (8) | 0.0316 (9) | 0.0007 (7) | −0.0006 (7) | 0.0002 (7) |
| C2 | 0.0290 (10) | 0.0274 (9) | 0.0298 (9) | 0.0004 (8) | 0.0041 (8) | −0.0010 (7) |
| C3 | 0.0229 (9) | 0.0273 (9) | 0.0357 (10) | 0.0014 (7) | 0.0076 (7) | 0.0024 (8) |
| C4 | 0.0164 (9) | 0.0269 (9) | 0.0378 (10) | −0.0005 (7) | −0.0007 (7) | 0.0025 (7) |
| C5 | 0.0216 (9) | 0.0243 (9) | 0.0311 (9) | −0.0001 (7) | 0.0004 (7) | 0.0001 (7) |
| C6 | 0.0194 (9) | 0.0224 (8) | 0.0305 (9) | 0.0013 (7) | 0.0020 (7) | 0.0017 (7) |
| C7 | 0.0225 (10) | 0.0241 (8) | 0.0305 (9) | 0.0029 (7) | 0.0013 (7) | 0.0016 (7) |
| C8 | 0.0202 (10) | 0.0343 (10) | 0.0319 (9) | 0.0042 (7) | 0.0069 (7) | 0.0022 (7) |
| C9 | 0.0269 (10) | 0.0329 (10) | 0.0319 (9) | 0.0082 (8) | 0.0063 (8) | 0.0027 (8) |
| C10 | 0.0226 (9) | 0.0255 (8) | 0.0275 (9) | 0.0044 (7) | 0.0012 (7) | 0.0012 (7) |
| C11 | 0.0281 (10) | 0.0276 (9) | 0.0323 (9) | 0.0039 (8) | −0.0047 (8) | −0.0027 (7) |
| C12 | 0.0209 (9) | 0.0258 (9) | 0.0341 (9) | 0.0029 (7) | 0.0031 (7) | 0.0033 (7) |
| C13 | 0.0362 (12) | 0.0413 (11) | 0.0422 (11) | 0.0092 (9) | 0.0162 (9) | 0.0023 (9) |
| C14 | 0.0619 (16) | 0.0498 (13) | 0.0336 (11) | 0.0158 (12) | 0.0087 (11) | −0.0085 (10) |
| C15 | 0.0499 (14) | 0.0478 (13) | 0.0388 (11) | 0.0072 (11) | −0.0129 (10) | −0.0144 (10) |
| C16 | 0.0262 (10) | 0.0361 (10) | 0.0406 (11) | 0.0029 (8) | −0.0063 (8) | −0.0047 (8) |
| C17 | 0.0190 (9) | 0.0239 (8) | 0.0286 (9) | 0.0034 (7) | 0.0005 (7) | 0.0006 (7) |
| O1—C1 | 1.264 (2) | C7—H7 | 0.9500 |
| O2—N1 | 1.231 (2) | C8—C9 | 1.527 (3) |
| O3—N1 | 1.237 (2) | C8—H8A | 0.9900 |
| N1—C4 | 1.433 (2) | C8—H8B | 0.9900 |
| N2—C7 | 1.292 (2) | C9—C10 | 1.498 (2) |
| N2—C8 | 1.454 (2) | C9—H9A | 0.9900 |
| N2—H2N | 0.883 (10) | C9—H9B | 0.9900 |
| N3—C12 | 1.363 (3) | C10—C11 | 1.359 (3) |
| N3—C11 | 1.371 (2) | C10—C17 | 1.430 (2) |
| N3—H3N | 0.879 (10) | C11—H11 | 0.9500 |
| C1—C2 | 1.439 (2) | C12—C13 | 1.396 (3) |
| C1—C6 | 1.446 (3) | C12—C17 | 1.407 (2) |
| C2—C3 | 1.355 (3) | C13—C14 | 1.375 (3) |
| C2—H2 | 0.9500 | C13—H13 | 0.9500 |
| C3—C4 | 1.402 (3) | C14—C15 | 1.389 (4) |
| C3—H3 | 0.9500 | C14—H14 | 0.9500 |
| C4—C5 | 1.375 (2) | C15—C16 | 1.375 (3) |
| C5—C6 | 1.393 (3) | C15—H15 | 0.9500 |
| C5—H5 | 0.9500 | C16—C17 | 1.394 (3) |
| C6—C7 | 1.421 (2) | C16—H16 | 0.9500 |
| O2—N1—O3 | 121.71 (18) | N2—C8—H8B | 109.5 |
| O2—N1—C4 | 118.51 (17) | C9—C8—H8B | 109.5 |
| O3—N1—C4 | 119.78 (16) | H8A—C8—H8B | 108.1 |
| C7—N2—C8 | 125.09 (16) | C10—C9—C8 | 111.78 (14) |
| C7—N2—H2N | 114.5 (16) | C10—C9—H9A | 109.3 |
| C8—N2—H2N | 120.4 (16) | C8—C9—H9A | 109.3 |
| C12—N3—C11 | 108.79 (15) | C10—C9—H9B | 109.3 |
| C12—N3—H3N | 127.4 (16) | C8—C9—H9B | 109.3 |
| C11—N3—H3N | 123.3 (16) | H9A—C9—H9B | 107.9 |
| O1—C1—C2 | 121.60 (16) | C11—C10—C17 | 106.10 (15) |
| O1—C1—C6 | 122.27 (16) | C11—C10—C9 | 127.56 (17) |
| C2—C1—C6 | 116.12 (16) | C17—C10—C9 | 126.29 (17) |
| C3—C2—C1 | 122.05 (17) | C10—C11—N3 | 110.38 (16) |
| C3—C2—H2 | 119.0 | C10—C11—H11 | 124.8 |
| C1—C2—H2 | 119.0 | N3—C11—H11 | 124.8 |
| C2—C3—C4 | 119.64 (16) | N3—C12—C13 | 130.60 (18) |
| C2—C3—H3 | 120.2 | N3—C12—C17 | 107.60 (15) |
| C4—C3—H3 | 120.2 | C13—C12—C17 | 121.76 (19) |
| C5—C4—C3 | 121.81 (17) | C14—C13—C12 | 117.22 (19) |
| C5—C4—N1 | 119.53 (17) | C14—C13—H13 | 121.4 |
| C3—C4—N1 | 118.65 (16) | C12—C13—H13 | 121.4 |
| C4—C5—C6 | 119.41 (17) | C13—C14—C15 | 121.91 (19) |
| C4—C5—H5 | 120.3 | C13—C14—H14 | 119.0 |
| C6—C5—H5 | 120.3 | C15—C14—H14 | 119.0 |
| C5—C6—C7 | 119.05 (16) | C16—C15—C14 | 120.9 (2) |
| C5—C6—C1 | 120.95 (16) | C16—C15—H15 | 119.6 |
| C7—C6—C1 | 119.97 (16) | C14—C15—H15 | 119.6 |
| N2—C7—C6 | 123.14 (17) | C15—C16—C17 | 119.08 (19) |
| N2—C7—H7 | 118.4 | C15—C16—H16 | 120.5 |
| C6—C7—H7 | 118.4 | C17—C16—H16 | 120.5 |
| N2—C8—C9 | 110.52 (14) | C16—C17—C12 | 119.15 (17) |
| N2—C8—H8A | 109.5 | C16—C17—C10 | 133.65 (16) |
| C9—C8—H8A | 109.5 | C12—C17—C10 | 107.12 (16) |
| O1—C1—C2—C3 | 179.54 (17) | C8—C9—C10—C11 | −108.7 (2) |
| C6—C1—C2—C3 | 0.6 (3) | C8—C9—C10—C17 | 68.3 (2) |
| C1—C2—C3—C4 | −1.2 (3) | C17—C10—C11—N3 | −0.7 (2) |
| C2—C3—C4—C5 | 1.2 (3) | C9—C10—C11—N3 | 176.80 (17) |
| C2—C3—C4—N1 | −178.08 (17) | C12—N3—C11—C10 | 0.1 (2) |
| O2—N1—C4—C5 | 172.08 (18) | C11—N3—C12—C13 | 178.3 (2) |
| O3—N1—C4—C5 | −8.1 (3) | C11—N3—C12—C17 | 0.5 (2) |
| O2—N1—C4—C3 | −8.7 (3) | N3—C12—C13—C14 | −176.5 (2) |
| O3—N1—C4—C3 | 171.20 (18) | C17—C12—C13—C14 | 1.0 (3) |
| C3—C4—C5—C6 | −0.5 (3) | C12—C13—C14—C15 | 0.2 (3) |
| N1—C4—C5—C6 | 178.68 (16) | C13—C14—C15—C16 | −0.9 (4) |
| C4—C5—C6—C7 | −177.79 (16) | C14—C15—C16—C17 | 0.4 (3) |
| C4—C5—C6—C1 | −0.1 (3) | C15—C16—C17—C12 | 0.8 (3) |
| O1—C1—C6—C5 | −178.92 (17) | C15—C16—C17—C10 | 177.4 (2) |
| C2—C1—C6—C5 | 0.1 (2) | N3—C12—C17—C16 | 176.45 (17) |
| O1—C1—C6—C7 | −1.2 (3) | C13—C12—C17—C16 | −1.5 (3) |
| C2—C1—C6—C7 | 177.77 (16) | N3—C12—C17—C10 | −0.9 (2) |
| C8—N2—C7—C6 | −175.39 (16) | C13—C12—C17—C10 | −178.93 (18) |
| C5—C6—C7—N2 | 178.55 (16) | C11—C10—C17—C16 | −175.9 (2) |
| C1—C6—C7—N2 | 0.8 (3) | C9—C10—C17—C16 | 6.6 (3) |
| C7—N2—C8—C9 | 109.1 (2) | C11—C10—C17—C12 | 1.0 (2) |
| N2—C8—C9—C10 | 177.58 (15) | C9—C10—C17—C12 | −176.53 (17) |
| H··· | ||||
| N2—H2n···O1 | 0.88 (1) | 1.87 (2) | 2.602 (2) | 139 (2) |
| N3—H3n···O2i | 0.88 (1) | 2.36 (2) | 3.027 (2) | 133 (2) |
| N3—H3n···O3i | 0.88 (1) | 2.23 (1) | 3.100 (2) | 171 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2n⋯O1 | 0.88 (1) | 1.87 (2) | 2.602 (2) | 139 (2) |
| N3—H3n⋯O2i | 0.88 (1) | 2.36 (2) | 3.027 (2) | 133 (2) |
| N3—H3n⋯O3i | 0.88 (1) | 2.23 (1) | 3.100 (2) | 171 (2) |
Symmetry code: (i) .