| Literature DB >> 21587534 |
Hasan Tanak, Ferda Erşahin, Metin Yavuz, Orhan Büyükgüngör.
Abstract
The title compound, C(6)H(6)N(2)O(3)·H(2)O, crystallizes with two formula units in the asymmetric unit. The mol-ecules are essentially planar with the nitro groups twisted slightly out of the ring planes [maximum deviations from the ring plane of 0.13 (2) and 0.22 (2) Å in the two mol-ecules]. The respective O-N-C-C torsion angles are 6.0 (4) and 12.5 (4)°. In the crystal structure, mol-ecules are linked by inter-molecular N-H⋯O, C-H⋯O, O-H⋯O and O-H⋯N inter-actions into a three-dimensional network.Entities:
Year: 2010 PMID: 21587534 PMCID: PMC2983309 DOI: 10.1107/S1600536810035415
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H6N2O3·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7016 reflections |
| θ = 1.9–27.3° | |
| µ = 0.13 mm−1 | |
| β = 99.328 (5)° | Prism, yellow |
| 0.62 × 0.30 × 0.05 mm | |
| Stoe IPDS II diffractometer | 3031 independent reflections |
| Radiation source: fine-focus sealed tube | 1598 reflections with |
| graphite | |
| Detector resolution: 6.67 pixels mm-1 | θmax = 26.0°, θmin = 1.9° |
| rotation method scans | |
| Absorption correction: integration ( | |
| 8719 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3031 reflections | Δρmax = 0.17 e Å−3 |
| 242 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0063 (11) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O3 | 0.6819 (3) | 0.50238 (8) | 0.1354 (2) | 0.0700 (6) | |
| H1 | 0.7078 | 0.4727 | 0.1882 | 0.105* | |
| C11 | 0.4215 (3) | 0.62410 (11) | 0.4251 (3) | 0.0524 (7) | |
| O6 | 0.3203 (3) | 0.52487 (8) | 0.3513 (2) | 0.0738 (6) | |
| H7 | 0.2634 | 0.5061 | 0.2849 | 0.111* | |
| C4 | 0.7466 (3) | 0.55594 (11) | 0.2003 (3) | 0.0525 (7) | |
| C5 | 0.7094 (3) | 0.61040 (11) | 0.1216 (3) | 0.0521 (6) | |
| C12 | 0.4337 (3) | 0.68701 (11) | 0.4013 (3) | 0.0534 (7) | |
| H12 | 0.4950 | 0.7129 | 0.4699 | 0.064* | |
| O8 | 0.7879 (3) | 0.39992 (9) | 0.2795 (3) | 0.0796 (7) | |
| C2 | 0.9053 (4) | 0.61399 (12) | 0.3917 (3) | 0.0581 (7) | |
| H2 | 0.9702 | 0.6158 | 0.4816 | 0.070* | |
| C10 | 0.3296 (3) | 0.58634 (11) | 0.3190 (3) | 0.0540 (7) | |
| N4 | 0.4880 (4) | 0.59777 (11) | 0.5561 (3) | 0.0661 (7) | |
| N2 | 0.6190 (4) | 0.60576 (11) | −0.0165 (3) | 0.0656 (7) | |
| C1 | 0.8706 (4) | 0.66709 (11) | 0.3123 (3) | 0.0543 (7) | |
| C6 | 0.7737 (4) | 0.66635 (11) | 0.1799 (3) | 0.0567 (7) | |
| H6 | 0.7515 | 0.7033 | 0.1299 | 0.068* | |
| O1 | 1.0411 (4) | 0.72657 (11) | 0.4830 (3) | 0.0981 (8) | |
| C3 | 0.8408 (4) | 0.55795 (12) | 0.3337 (3) | 0.0580 (7) | |
| H3 | 0.8612 | 0.5214 | 0.3853 | 0.070* | |
| N3 | 0.3654 (4) | 0.77812 (11) | 0.2558 (3) | 0.0690 (7) | |
| N1 | 0.9413 (4) | 0.72598 (12) | 0.3708 (3) | 0.0744 (8) | |
| C9 | 0.2545 (4) | 0.61152 (12) | 0.1923 (3) | 0.0612 (7) | |
| H9 | 0.1966 | 0.5858 | 0.1219 | 0.073* | |
| C8 | 0.2650 (4) | 0.67473 (12) | 0.1700 (3) | 0.0614 (7) | |
| H8 | 0.2126 | 0.6922 | 0.0856 | 0.074* | |
| C7 | 0.3544 (4) | 0.71151 (11) | 0.2748 (3) | 0.0540 (7) | |
| O5 | 0.4692 (4) | 0.80874 (9) | 0.3407 (3) | 0.0955 (8) | |
| O4 | 0.2702 (3) | 0.80249 (9) | 0.1563 (3) | 0.0911 (8) | |
| O2 | 0.9015 (4) | 0.77391 (10) | 0.3045 (3) | 0.1136 (10) | |
| O7 | 0.1271 (4) | 0.45374 (12) | 0.1652 (4) | 0.1135 (11) | |
| H11 | 0.513 (6) | 0.558 (2) | 0.552 (5) | 0.170* | |
| H5 | 0.544 (7) | 0.574 (2) | −0.025 (5) | 0.170* | |
| H10 | 0.584 (7) | 0.620 (2) | 0.603 (5) | 0.170* | |
| H4 | 0.564 (7) | 0.641 (2) | −0.048 (5) | 0.170* | |
| H15 | 0.808 (7) | 0.368 (2) | 0.243 (6) | 0.170* | |
| H16 | 0.686 (7) | 0.394 (2) | 0.327 (5) | 0.170* | |
| H13 | 0.201 (7) | 0.432 (2) | 0.122 (6) | 0.170* | |
| H14 | 0.055 (7) | 0.431 (2) | 0.188 (6) | 0.170* |
| O3 | 0.0838 (15) | 0.0491 (10) | 0.0692 (13) | −0.0074 (9) | −0.0118 (11) | 0.0001 (10) |
| C11 | 0.0552 (17) | 0.0446 (14) | 0.0573 (18) | 0.0031 (11) | 0.0091 (13) | 0.0025 (13) |
| O6 | 0.0843 (16) | 0.0441 (10) | 0.0885 (15) | −0.0017 (9) | 0.0006 (11) | −0.0001 (10) |
| C4 | 0.0559 (17) | 0.0441 (14) | 0.0555 (18) | −0.0012 (12) | 0.0031 (13) | −0.0018 (14) |
| C5 | 0.0512 (16) | 0.0507 (14) | 0.0534 (17) | 0.0033 (12) | 0.0056 (13) | −0.0005 (14) |
| C12 | 0.0575 (18) | 0.0436 (14) | 0.0573 (18) | 0.0006 (11) | 0.0038 (13) | 0.0024 (13) |
| O8 | 0.0979 (19) | 0.0521 (11) | 0.0887 (18) | 0.0038 (11) | 0.0145 (13) | 0.0065 (11) |
| C2 | 0.0568 (17) | 0.0612 (17) | 0.0530 (17) | 0.0036 (13) | −0.0011 (13) | −0.0075 (15) |
| C10 | 0.0549 (18) | 0.0402 (13) | 0.068 (2) | 0.0042 (11) | 0.0126 (14) | 0.0023 (14) |
| N4 | 0.0814 (19) | 0.0477 (12) | 0.0641 (17) | 0.0015 (12) | −0.0041 (13) | 0.0101 (13) |
| N2 | 0.0727 (18) | 0.0609 (14) | 0.0581 (16) | 0.0057 (12) | −0.0050 (13) | 0.0039 (13) |
| C1 | 0.0514 (16) | 0.0478 (14) | 0.064 (2) | −0.0011 (12) | 0.0099 (14) | −0.0135 (14) |
| C6 | 0.0570 (17) | 0.0458 (14) | 0.068 (2) | 0.0048 (12) | 0.0128 (15) | 0.0029 (15) |
| O1 | 0.0942 (18) | 0.0970 (17) | 0.0998 (19) | −0.0290 (13) | 0.0057 (15) | −0.0430 (16) |
| C3 | 0.0661 (19) | 0.0492 (14) | 0.0557 (19) | 0.0042 (12) | 0.0007 (14) | 0.0026 (13) |
| N3 | 0.0799 (19) | 0.0529 (14) | 0.0747 (19) | 0.0083 (13) | 0.0136 (15) | 0.0146 (15) |
| N1 | 0.0694 (19) | 0.0599 (17) | 0.096 (2) | −0.0080 (13) | 0.0205 (17) | −0.0282 (17) |
| C9 | 0.0613 (18) | 0.0606 (16) | 0.0597 (18) | 0.0016 (13) | 0.0039 (14) | −0.0047 (15) |
| C8 | 0.0599 (19) | 0.0641 (17) | 0.0594 (19) | 0.0103 (14) | 0.0075 (14) | 0.0096 (15) |
| C7 | 0.0526 (17) | 0.0459 (13) | 0.0635 (19) | 0.0067 (12) | 0.0097 (14) | 0.0088 (14) |
| O5 | 0.122 (2) | 0.0524 (12) | 0.104 (2) | −0.0134 (12) | −0.0068 (16) | 0.0133 (13) |
| O4 | 0.1057 (19) | 0.0673 (13) | 0.0949 (18) | 0.0214 (12) | −0.0002 (14) | 0.0300 (13) |
| O2 | 0.137 (2) | 0.0485 (13) | 0.149 (3) | −0.0033 (13) | 0.0030 (19) | −0.0150 (15) |
| O7 | 0.105 (2) | 0.0883 (18) | 0.156 (3) | −0.0325 (14) | 0.0474 (18) | −0.0539 (18) |
| O3—C4 | 1.361 (3) | N4—H11 | 0.88 (5) |
| O3—H1 | 0.8200 | N4—H10 | 0.92 (5) |
| C11—C12 | 1.374 (3) | N2—H5 | 0.89 (5) |
| C11—C10 | 1.402 (4) | N2—H4 | 0.89 (5) |
| C11—N4 | 1.408 (4) | C1—C6 | 1.372 (4) |
| O6—C10 | 1.359 (3) | C1—N1 | 1.450 (3) |
| O6—H7 | 0.8200 | C6—H6 | 0.9300 |
| C4—C3 | 1.374 (4) | O1—N1 | 1.219 (4) |
| C4—C5 | 1.398 (3) | C3—H3 | 0.9300 |
| C5—C6 | 1.380 (3) | N3—O4 | 1.223 (3) |
| C5—N2 | 1.406 (4) | N3—O5 | 1.230 (3) |
| C12—C7 | 1.380 (4) | N3—C7 | 1.444 (3) |
| C12—H12 | 0.9300 | N1—O2 | 1.224 (3) |
| O8—H15 | 0.80 (5) | C9—C8 | 1.377 (4) |
| O8—H16 | 0.96 (5) | C9—H9 | 0.9300 |
| C2—C1 | 1.376 (4) | C8—C7 | 1.374 (4) |
| C2—C3 | 1.382 (4) | C8—H8 | 0.9300 |
| C2—H2 | 0.9300 | O7—H13 | 0.89 (5) |
| C10—C9 | 1.378 (4) | O7—H14 | 0.78 (5) |
| C4—O3—H1 | 109.5 | H5—N2—H4 | 112 (4) |
| C12—C11—C10 | 118.8 (2) | C6—C1—C2 | 122.7 (2) |
| C12—C11—N4 | 121.5 (3) | C6—C1—N1 | 118.9 (3) |
| C10—C11—N4 | 119.6 (2) | C2—C1—N1 | 118.4 (3) |
| C10—O6—H7 | 109.5 | C1—C6—C5 | 119.5 (2) |
| O3—C4—C3 | 123.7 (2) | C1—C6—H6 | 120.2 |
| O3—C4—C5 | 115.2 (2) | C5—C6—H6 | 120.2 |
| C3—C4—C5 | 121.1 (2) | C4—C3—C2 | 120.4 (3) |
| C6—C5—C4 | 118.4 (2) | C4—C3—H3 | 119.8 |
| C6—C5—N2 | 122.5 (2) | C2—C3—H3 | 119.8 |
| C4—C5—N2 | 119.0 (2) | O4—N3—O5 | 122.0 (2) |
| C11—C12—C7 | 119.5 (3) | O4—N3—C7 | 119.0 (3) |
| C11—C12—H12 | 120.3 | O5—N3—C7 | 119.1 (3) |
| C7—C12—H12 | 120.3 | O1—N1—O2 | 121.6 (3) |
| H15—O8—H16 | 109 (4) | O1—N1—C1 | 119.6 (3) |
| C1—C2—C3 | 117.9 (2) | O2—N1—C1 | 118.7 (3) |
| C1—C2—H2 | 121.1 | C8—C9—C10 | 120.0 (3) |
| C3—C2—H2 | 121.1 | C8—C9—H9 | 120.0 |
| O6—C10—C9 | 123.9 (3) | C10—C9—H9 | 120.0 |
| O6—C10—C11 | 115.3 (2) | C7—C8—C9 | 118.8 (3) |
| C9—C10—C11 | 120.9 (2) | C7—C8—H8 | 120.6 |
| C11—N4—H11 | 113 (3) | C9—C8—H8 | 120.6 |
| C11—N4—H10 | 112 (3) | C8—C7—C12 | 122.0 (2) |
| H11—N4—H10 | 112 (4) | C8—C7—N3 | 120.3 (3) |
| C5—N2—H5 | 110 (3) | C12—C7—N3 | 117.7 (3) |
| C5—N2—H4 | 113 (3) | H13—O7—H14 | 109 (5) |
| O3—C4—C5—C6 | −178.9 (2) | C5—C4—C3—C2 | −1.8 (4) |
| C3—C4—C5—C6 | 1.6 (4) | C1—C2—C3—C4 | 0.6 (4) |
| O3—C4—C5—N2 | −3.1 (4) | C6—C1—N1—O1 | −173.4 (3) |
| C3—C4—C5—N2 | 177.4 (3) | C2—C1—N1—O1 | 6.0 (4) |
| C10—C11—C12—C7 | 0.6 (4) | C6—C1—N1—O2 | 5.2 (4) |
| N4—C11—C12—C7 | −175.0 (2) | C2—C1—N1—O2 | −175.4 (3) |
| C12—C11—C10—O6 | −178.8 (2) | O6—C10—C9—C8 | 177.8 (2) |
| N4—C11—C10—O6 | −3.2 (4) | C11—C10—C9—C8 | −1.7 (4) |
| C12—C11—C10—C9 | 0.8 (4) | C10—C9—C8—C7 | 1.3 (4) |
| N4—C11—C10—C9 | 176.4 (3) | C9—C8—C7—C12 | 0.0 (4) |
| C3—C2—C1—C6 | 0.8 (4) | C9—C8—C7—N3 | −179.0 (2) |
| C3—C2—C1—N1 | −178.6 (2) | C11—C12—C7—C8 | −1.0 (4) |
| C2—C1—C6—C5 | −0.9 (4) | C11—C12—C7—N3 | 178.0 (2) |
| N1—C1—C6—C5 | 178.4 (2) | O4—N3—C7—C8 | 12.1 (4) |
| C4—C5—C6—C1 | −0.3 (4) | O5—N3—C7—C8 | −168.4 (3) |
| N2—C5—C6—C1 | −175.9 (3) | O4—N3—C7—C12 | −166.9 (3) |
| O3—C4—C3—C2 | 178.7 (2) | O5—N3—C7—C12 | 12.5 (4) |
| H··· | ||||
| N2—H4···O2i | 0.89 (5) | 2.51 (5) | 3.382 (3) | 165 (4) |
| N2—H5···O3ii | 0.89 (5) | 2.47 (5) | 3.317 (3) | 159 (4) |
| N4—H10···O4iii | 0.92 (5) | 2.18 (5) | 3.062 (3) | 159 (4) |
| N4—H11···O6iv | 0.88 (5) | 2.28 (5) | 3.064 (3) | 147 (4) |
| O7—H13···N2ii | 0.89 (5) | 2.00 (5) | 2.877 (4) | 172 (5) |
| O7—H14···O8v | 0.78 (5) | 2.43 (5) | 3.166 (4) | 158 (5) |
| O8—H15···O2vi | 0.80 (5) | 2.55 (5) | 3.102 (3) | 127 (4) |
| O8—H15···O5vi | 0.80 (5) | 2.35 (5) | 3.038 (3) | 144 (5) |
| O8—H16···N4iv | 0.96 (5) | 1.88 (5) | 2.821 (4) | 164 (4) |
| C6—H6···O1i | 0.93 | 2.47 | 3.304 (4) | 150 |
| C12—H12···O4iii | 0.93 | 2.54 | 3.254 (4) | 133 |
| O3—H1···O8 | 0.82 | 1.85 | 2.657 (3) | 169 |
| O6—H7···O7 | 0.82 | 1.81 | 2.619 (4) | 168 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H4⋯O2i | 0.89 (5) | 2.51 (5) | 3.382 (3) | 165 (4) |
| N2—H5⋯O3ii | 0.89 (5) | 2.47 (5) | 3.317 (3) | 159 (4) |
| N4—H10⋯O4iii | 0.92 (5) | 2.18 (5) | 3.062 (3) | 159 (4) |
| N4—H11⋯O6iv | 0.88 (5) | 2.28 (5) | 3.064 (3) | 147 (4) |
| O7—H13⋯N2ii | 0.89 (5) | 2.00 (5) | 2.877 (4) | 172 (5) |
| O7—H14⋯O8v | 0.78 (5) | 2.43 (5) | 3.166 (4) | 158 (5) |
| O8—H15⋯O2vi | 0.80 (5) | 2.55 (5) | 3.102 (3) | 127 (4) |
| O8—H15⋯O5vi | 0.80 (5) | 2.35 (5) | 3.038 (3) | 144 (5) |
| O8—H16⋯N4iv | 0.96 (5) | 1.88 (5) | 2.821 (4) | 164 (4) |
| C6—H6⋯O1i | 0.93 | 2.47 | 3.304 (4) | 150 |
| C12—H12⋯O4iii | 0.93 | 2.54 | 3.254 (4) | 133 |
| O3—H1⋯O8 | 0.82 | 1.85 | 2.657 (3) | 169 |
| O6—H7⋯O7 | 0.82 | 1.81 | 2.619 (4) | 168 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .