Literature DB >> 21587534

2-Amino-4-nitro-phenol monohydrate.

Hasan Tanak, Ferda Erşahin, Metin Yavuz, Orhan Büyükgüngör.   

Abstract

The title compound, C(6)H(6)N(2)O(3)·H(2)O, crystallizes with two formula units in the asymmetric unit. The mol-ecules are essentially planar with the nitro groups twisted slightly out of the ring planes [maximum deviations from the ring plane of 0.13 (2) and 0.22 (2) Å in the two mol-ecules]. The respective O-N-C-C torsion angles are 6.0 (4) and 12.5 (4)°. In the crystal structure, mol-ecules are linked by inter-molecular N-H⋯O, C-H⋯O, O-H⋯O and O-H⋯N inter-actions into a three-dimensional network.

Entities:  

Year:  2010        PMID: 21587534      PMCID: PMC2983309          DOI: 10.1107/S1600536810035415

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of nitro­aromatics as inter­mediates in explosives, dyestuffs, pesticides and organic synthesis, see: Yan et al. (2006 ▶). For the occurrence of nitro­aromatics in industrial wastes and as direct pollutants in the environment, see: Yan et al. (2006 ▶); Soojhawon et al. (2005 ▶). For related structures, see: Tanak et al. (2010 ▶); Bi et al. (2009 ▶); Garden et al. (2004 ▶).

Experimental

Crystal data

C6H6N2O3·H2O M = 172.14 Monoclinic, a = 7.539 (5) Å b = 21.436 (5) Å c = 9.714 (5) Å β = 99.328 (5)° V = 1549.1 (13) Å3 Z = 8 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.62 × 0.30 × 0.05 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.578, T max = 0.892 8719 measured reflections 3031 independent reflections 1598 reflections with I > 2σ(I) R int = 0.069

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.116 S = 0.98 3031 reflections 242 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.21 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810035415/bt5342sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810035415/bt5342Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H6N2O3·H2OF(000) = 720
Mr = 172.14Dx = 1.476 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71069 Å
Hall symbol: -P 2ynCell parameters from 7016 reflections
a = 7.539 (5) Åθ = 1.9–27.3°
b = 21.436 (5) ŵ = 0.13 mm1
c = 9.714 (5) ÅT = 296 K
β = 99.328 (5)°Prism, yellow
V = 1549.1 (13) Å30.62 × 0.30 × 0.05 mm
Z = 8
Stoe IPDS II diffractometer3031 independent reflections
Radiation source: fine-focus sealed tube1598 reflections with I > 2σ(I)
graphiteRint = 0.069
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 1.9°
rotation method scansh = −7→9
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −26→26
Tmin = 0.578, Tmax = 0.892l = −11→11
8719 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.116w = 1/[σ2(Fo2) + (0.0426P)2] where P = (Fo2 + 2Fc2)/3
S = 0.98(Δ/σ)max < 0.001
3031 reflectionsΔρmax = 0.17 e Å3
242 parametersΔρmin = −0.21 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0063 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.6819 (3)0.50238 (8)0.1354 (2)0.0700 (6)
H10.70780.47270.18820.105*
C110.4215 (3)0.62410 (11)0.4251 (3)0.0524 (7)
O60.3203 (3)0.52487 (8)0.3513 (2)0.0738 (6)
H70.26340.50610.28490.111*
C40.7466 (3)0.55594 (11)0.2003 (3)0.0525 (7)
C50.7094 (3)0.61040 (11)0.1216 (3)0.0521 (6)
C120.4337 (3)0.68701 (11)0.4013 (3)0.0534 (7)
H120.49500.71290.46990.064*
O80.7879 (3)0.39992 (9)0.2795 (3)0.0796 (7)
C20.9053 (4)0.61399 (12)0.3917 (3)0.0581 (7)
H20.97020.61580.48160.070*
C100.3296 (3)0.58634 (11)0.3190 (3)0.0540 (7)
N40.4880 (4)0.59777 (11)0.5561 (3)0.0661 (7)
N20.6190 (4)0.60576 (11)−0.0165 (3)0.0656 (7)
C10.8706 (4)0.66709 (11)0.3123 (3)0.0543 (7)
C60.7737 (4)0.66635 (11)0.1799 (3)0.0567 (7)
H60.75150.70330.12990.068*
O11.0411 (4)0.72657 (11)0.4830 (3)0.0981 (8)
C30.8408 (4)0.55795 (12)0.3337 (3)0.0580 (7)
H30.86120.52140.38530.070*
N30.3654 (4)0.77812 (11)0.2558 (3)0.0690 (7)
N10.9413 (4)0.72598 (12)0.3708 (3)0.0744 (8)
C90.2545 (4)0.61152 (12)0.1923 (3)0.0612 (7)
H90.19660.58580.12190.073*
C80.2650 (4)0.67473 (12)0.1700 (3)0.0614 (7)
H80.21260.69220.08560.074*
C70.3544 (4)0.71151 (11)0.2748 (3)0.0540 (7)
O50.4692 (4)0.80874 (9)0.3407 (3)0.0955 (8)
O40.2702 (3)0.80249 (9)0.1563 (3)0.0911 (8)
O20.9015 (4)0.77391 (10)0.3045 (3)0.1136 (10)
O70.1271 (4)0.45374 (12)0.1652 (4)0.1135 (11)
H110.513 (6)0.558 (2)0.552 (5)0.170*
H50.544 (7)0.574 (2)−0.025 (5)0.170*
H100.584 (7)0.620 (2)0.603 (5)0.170*
H40.564 (7)0.641 (2)−0.048 (5)0.170*
H150.808 (7)0.368 (2)0.243 (6)0.170*
H160.686 (7)0.394 (2)0.327 (5)0.170*
H130.201 (7)0.432 (2)0.122 (6)0.170*
H140.055 (7)0.431 (2)0.188 (6)0.170*
U11U22U33U12U13U23
O30.0838 (15)0.0491 (10)0.0692 (13)−0.0074 (9)−0.0118 (11)0.0001 (10)
C110.0552 (17)0.0446 (14)0.0573 (18)0.0031 (11)0.0091 (13)0.0025 (13)
O60.0843 (16)0.0441 (10)0.0885 (15)−0.0017 (9)0.0006 (11)−0.0001 (10)
C40.0559 (17)0.0441 (14)0.0555 (18)−0.0012 (12)0.0031 (13)−0.0018 (14)
C50.0512 (16)0.0507 (14)0.0534 (17)0.0033 (12)0.0056 (13)−0.0005 (14)
C120.0575 (18)0.0436 (14)0.0573 (18)0.0006 (11)0.0038 (13)0.0024 (13)
O80.0979 (19)0.0521 (11)0.0887 (18)0.0038 (11)0.0145 (13)0.0065 (11)
C20.0568 (17)0.0612 (17)0.0530 (17)0.0036 (13)−0.0011 (13)−0.0075 (15)
C100.0549 (18)0.0402 (13)0.068 (2)0.0042 (11)0.0126 (14)0.0023 (14)
N40.0814 (19)0.0477 (12)0.0641 (17)0.0015 (12)−0.0041 (13)0.0101 (13)
N20.0727 (18)0.0609 (14)0.0581 (16)0.0057 (12)−0.0050 (13)0.0039 (13)
C10.0514 (16)0.0478 (14)0.064 (2)−0.0011 (12)0.0099 (14)−0.0135 (14)
C60.0570 (17)0.0458 (14)0.068 (2)0.0048 (12)0.0128 (15)0.0029 (15)
O10.0942 (18)0.0970 (17)0.0998 (19)−0.0290 (13)0.0057 (15)−0.0430 (16)
C30.0661 (19)0.0492 (14)0.0557 (19)0.0042 (12)0.0007 (14)0.0026 (13)
N30.0799 (19)0.0529 (14)0.0747 (19)0.0083 (13)0.0136 (15)0.0146 (15)
N10.0694 (19)0.0599 (17)0.096 (2)−0.0080 (13)0.0205 (17)−0.0282 (17)
C90.0613 (18)0.0606 (16)0.0597 (18)0.0016 (13)0.0039 (14)−0.0047 (15)
C80.0599 (19)0.0641 (17)0.0594 (19)0.0103 (14)0.0075 (14)0.0096 (15)
C70.0526 (17)0.0459 (13)0.0635 (19)0.0067 (12)0.0097 (14)0.0088 (14)
O50.122 (2)0.0524 (12)0.104 (2)−0.0134 (12)−0.0068 (16)0.0133 (13)
O40.1057 (19)0.0673 (13)0.0949 (18)0.0214 (12)−0.0002 (14)0.0300 (13)
O20.137 (2)0.0485 (13)0.149 (3)−0.0033 (13)0.0030 (19)−0.0150 (15)
O70.105 (2)0.0883 (18)0.156 (3)−0.0325 (14)0.0474 (18)−0.0539 (18)
O3—C41.361 (3)N4—H110.88 (5)
O3—H10.8200N4—H100.92 (5)
C11—C121.374 (3)N2—H50.89 (5)
C11—C101.402 (4)N2—H40.89 (5)
C11—N41.408 (4)C1—C61.372 (4)
O6—C101.359 (3)C1—N11.450 (3)
O6—H70.8200C6—H60.9300
C4—C31.374 (4)O1—N11.219 (4)
C4—C51.398 (3)C3—H30.9300
C5—C61.380 (3)N3—O41.223 (3)
C5—N21.406 (4)N3—O51.230 (3)
C12—C71.380 (4)N3—C71.444 (3)
C12—H120.9300N1—O21.224 (3)
O8—H150.80 (5)C9—C81.377 (4)
O8—H160.96 (5)C9—H90.9300
C2—C11.376 (4)C8—C71.374 (4)
C2—C31.382 (4)C8—H80.9300
C2—H20.9300O7—H130.89 (5)
C10—C91.378 (4)O7—H140.78 (5)
C4—O3—H1109.5H5—N2—H4112 (4)
C12—C11—C10118.8 (2)C6—C1—C2122.7 (2)
C12—C11—N4121.5 (3)C6—C1—N1118.9 (3)
C10—C11—N4119.6 (2)C2—C1—N1118.4 (3)
C10—O6—H7109.5C1—C6—C5119.5 (2)
O3—C4—C3123.7 (2)C1—C6—H6120.2
O3—C4—C5115.2 (2)C5—C6—H6120.2
C3—C4—C5121.1 (2)C4—C3—C2120.4 (3)
C6—C5—C4118.4 (2)C4—C3—H3119.8
C6—C5—N2122.5 (2)C2—C3—H3119.8
C4—C5—N2119.0 (2)O4—N3—O5122.0 (2)
C11—C12—C7119.5 (3)O4—N3—C7119.0 (3)
C11—C12—H12120.3O5—N3—C7119.1 (3)
C7—C12—H12120.3O1—N1—O2121.6 (3)
H15—O8—H16109 (4)O1—N1—C1119.6 (3)
C1—C2—C3117.9 (2)O2—N1—C1118.7 (3)
C1—C2—H2121.1C8—C9—C10120.0 (3)
C3—C2—H2121.1C8—C9—H9120.0
O6—C10—C9123.9 (3)C10—C9—H9120.0
O6—C10—C11115.3 (2)C7—C8—C9118.8 (3)
C9—C10—C11120.9 (2)C7—C8—H8120.6
C11—N4—H11113 (3)C9—C8—H8120.6
C11—N4—H10112 (3)C8—C7—C12122.0 (2)
H11—N4—H10112 (4)C8—C7—N3120.3 (3)
C5—N2—H5110 (3)C12—C7—N3117.7 (3)
C5—N2—H4113 (3)H13—O7—H14109 (5)
O3—C4—C5—C6−178.9 (2)C5—C4—C3—C2−1.8 (4)
C3—C4—C5—C61.6 (4)C1—C2—C3—C40.6 (4)
O3—C4—C5—N2−3.1 (4)C6—C1—N1—O1−173.4 (3)
C3—C4—C5—N2177.4 (3)C2—C1—N1—O16.0 (4)
C10—C11—C12—C70.6 (4)C6—C1—N1—O25.2 (4)
N4—C11—C12—C7−175.0 (2)C2—C1—N1—O2−175.4 (3)
C12—C11—C10—O6−178.8 (2)O6—C10—C9—C8177.8 (2)
N4—C11—C10—O6−3.2 (4)C11—C10—C9—C8−1.7 (4)
C12—C11—C10—C90.8 (4)C10—C9—C8—C71.3 (4)
N4—C11—C10—C9176.4 (3)C9—C8—C7—C120.0 (4)
C3—C2—C1—C60.8 (4)C9—C8—C7—N3−179.0 (2)
C3—C2—C1—N1−178.6 (2)C11—C12—C7—C8−1.0 (4)
C2—C1—C6—C5−0.9 (4)C11—C12—C7—N3178.0 (2)
N1—C1—C6—C5178.4 (2)O4—N3—C7—C812.1 (4)
C4—C5—C6—C1−0.3 (4)O5—N3—C7—C8−168.4 (3)
N2—C5—C6—C1−175.9 (3)O4—N3—C7—C12−166.9 (3)
O3—C4—C3—C2178.7 (2)O5—N3—C7—C1212.5 (4)
D—H···AD—HH···AD···AD—H···A
N2—H4···O2i0.89 (5)2.51 (5)3.382 (3)165 (4)
N2—H5···O3ii0.89 (5)2.47 (5)3.317 (3)159 (4)
N4—H10···O4iii0.92 (5)2.18 (5)3.062 (3)159 (4)
N4—H11···O6iv0.88 (5)2.28 (5)3.064 (3)147 (4)
O7—H13···N2ii0.89 (5)2.00 (5)2.877 (4)172 (5)
O7—H14···O8v0.78 (5)2.43 (5)3.166 (4)158 (5)
O8—H15···O2vi0.80 (5)2.55 (5)3.102 (3)127 (4)
O8—H15···O5vi0.80 (5)2.35 (5)3.038 (3)144 (5)
O8—H16···N4iv0.96 (5)1.88 (5)2.821 (4)164 (4)
C6—H6···O1i0.932.473.304 (4)150
C12—H12···O4iii0.932.543.254 (4)133
O3—H1···O80.821.852.657 (3)169
O6—H7···O70.821.812.619 (4)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H4⋯O2i0.89 (5)2.51 (5)3.382 (3)165 (4)
N2—H5⋯O3ii0.89 (5)2.47 (5)3.317 (3)159 (4)
N4—H10⋯O4iii0.92 (5)2.18 (5)3.062 (3)159 (4)
N4—H11⋯O6iv0.88 (5)2.28 (5)3.064 (3)147 (4)
O7—H13⋯N2ii0.89 (5)2.00 (5)2.877 (4)172 (5)
O7—H14⋯O8v0.78 (5)2.43 (5)3.166 (4)158 (5)
O8—H15⋯O2vi0.80 (5)2.55 (5)3.102 (3)127 (4)
O8—H15⋯O5vi0.80 (5)2.35 (5)3.038 (3)144 (5)
O8—H16⋯N4iv0.96 (5)1.88 (5)2.821 (4)164 (4)
C6—H6⋯O1i0.932.473.304 (4)150
C12—H12⋯O4iii0.932.543.254 (4)133
O3—H1⋯O80.821.852.657 (3)169
O6—H7⋯O70.821.812.619 (4)168

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Three-dimensional aggregation in 2-hydroxy-3-iodo-5-nitrobenzaldehyde involving C-H...O, iodo-nitro and aromatic pi-pi stacking interactions, and isolated dimers in disordered 2,4-diiodo-6-nitroanisole.

Authors:  Simon J Garden; Fernando R da Cunha; Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2003-12-06       Impact factor: 1.172

3.  2-Hydr-oxy-5-nitro-benzaldehyde.

Authors:  Hasan Tanak; Mustafa Macit; Metin Yavuz; Samil Işık
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-11

4.  2-Methyl-4-nitro-phenol.

Authors:  Sheng Bi; Yong-Zhong Wu; Yi-Xin Zhou; Jian-Guo Tang; Cheng Guo
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-23
  4 in total
  1 in total

1.  2-Amino-4-nitro-phenol-1-(2,4,6-trihy-droxy-phen-yl)ethanone (1/1).

Authors:  Can Kocabıyık; Hümeyra Paşaoğlu; Taşkın Basılı; Erbil Ağar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-25
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.