| Literature DB >> 22589953 |
Rahman Bikas, Samra Nikbakht Sardari, Seyed Sajjad Hosseini, Gholam Hossein Shahverdizadeh, Behrouz Notash.
Abstract
In the title mol-ecule, C(8)H(8)IN(3)O(2), there is an intra-molecular O-H⋯N hydrogen bond between the hy-droxy group and the imine N atom, which generates an S(6) ring. In the crystal, the carbonyl O atom accepts two different N-H⋯O hydrogen bonds, which connect mol-ecules with two R(2) (2)(8) motifs.Entities:
Year: 2012 PMID: 22589953 PMCID: PMC3344044 DOI: 10.1107/S1600536812010197
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8IN3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yc | Cell parameters from 2686 reflections |
| θ = 2.7–29.2° | |
| µ = 3.20 mm−1 | |
| β = 95.31 (3)° | Block, colorless |
| 0.25 × 0.13 × 0.12 mm | |
| Stoe IPDS 2T diffractometer | 2686 independent reflections |
| Radiation source: fine-focus sealed tube | 2362 reflections with |
| Graphite monochromator | |
| Detector resolution: 0.15 mm pixels mm-1 | θmax = 29.2°, θmin = 2.7° |
| rotation method scans | |
| Absorption correction: numerical (shape of crystal determined optically;
| |
| 10438 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2686 reflections | (Δ/σ)max = 0.001 |
| 143 parameters | Δρmax = 0.75 e Å−3 |
| 1 restraint | Δρmin = −0.71 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| I1 | 0.71642 (2) | 0.52615 (2) | 1.210107 (13) | 0.02620 (6) | |
| O2 | 1.52011 (18) | 1.0591 (2) | 0.88088 (11) | 0.0160 (3) | |
| N2 | 1.3349 (2) | 0.9116 (3) | 0.93933 (14) | 0.0149 (4) | |
| C8 | 1.3955 (2) | 0.9896 (3) | 0.86612 (16) | 0.0137 (4) | |
| N3 | 1.3205 (2) | 0.9864 (3) | 0.78198 (15) | 0.0166 (4) | |
| N1 | 1.1902 (2) | 0.8602 (3) | 0.93061 (14) | 0.0134 (4) | |
| O1 | 0.9242 (2) | 0.8354 (3) | 0.84348 (13) | 0.0217 (4) | |
| C1 | 0.9856 (3) | 0.7452 (3) | 1.00333 (17) | 0.0139 (4) | |
| C2 | 0.8840 (3) | 0.7661 (3) | 0.92413 (17) | 0.0150 (4) | |
| C7 | 1.1398 (3) | 0.7979 (3) | 1.00415 (16) | 0.0137 (4) | |
| H7 | 1.2036 | 0.7860 | 1.0599 | 0.016* | |
| C6 | 0.9357 (3) | 0.6755 (3) | 1.08517 (17) | 0.0165 (5) | |
| H6 | 1.0028 | 0.6609 | 1.1393 | 0.020* | |
| C4 | 0.6899 (3) | 0.6494 (3) | 1.00927 (19) | 0.0191 (5) | |
| H4 | 0.5895 | 0.6172 | 1.0115 | 0.023* | |
| C3 | 0.7373 (3) | 0.7178 (3) | 0.92780 (18) | 0.0187 (5) | |
| H3 | 0.6691 | 0.7319 | 0.8742 | 0.022* | |
| C5 | 0.7893 (3) | 0.6278 (3) | 1.08752 (18) | 0.0173 (5) | |
| H2 | 1.380 (4) | 0.917 (4) | 0.990 (3) | 0.022 (8)* | |
| H3A | 1.244 (4) | 0.929 (5) | 0.773 (3) | 0.029 (9)* | |
| H3B | 1.359 (4) | 1.028 (5) | 0.738 (3) | 0.028 (9)* | |
| H1 | 1.016 (2) | 0.849 (5) | 0.849 (3) | 0.037 (10)* |
| I1 | 0.03341 (10) | 0.02256 (9) | 0.02507 (9) | −0.00405 (7) | 0.01569 (7) | 0.00293 (7) |
| O2 | 0.0139 (7) | 0.0241 (10) | 0.0102 (8) | −0.0040 (6) | 0.0015 (6) | −0.0006 (6) |
| N2 | 0.0121 (9) | 0.0243 (10) | 0.0081 (9) | −0.0052 (8) | 0.0003 (7) | 0.0002 (8) |
| C8 | 0.0143 (9) | 0.0174 (12) | 0.0095 (9) | 0.0005 (8) | 0.0019 (8) | −0.0004 (8) |
| N3 | 0.0153 (9) | 0.0243 (11) | 0.0101 (9) | −0.0040 (8) | 0.0007 (7) | 0.0005 (8) |
| N1 | 0.0112 (9) | 0.0159 (9) | 0.0132 (9) | −0.0012 (7) | 0.0011 (7) | −0.0023 (7) |
| O1 | 0.0150 (9) | 0.0375 (11) | 0.0121 (8) | −0.0015 (7) | −0.0009 (7) | 0.0058 (7) |
| C1 | 0.0149 (11) | 0.0130 (12) | 0.0141 (10) | −0.0002 (8) | 0.0032 (8) | −0.0014 (8) |
| C2 | 0.0147 (11) | 0.0174 (11) | 0.0131 (11) | −0.0005 (8) | 0.0020 (8) | −0.0005 (9) |
| C7 | 0.0130 (10) | 0.0171 (11) | 0.0109 (10) | −0.0006 (8) | 0.0010 (8) | −0.0011 (8) |
| C6 | 0.0176 (11) | 0.0180 (12) | 0.0140 (11) | 0.0003 (9) | 0.0030 (9) | 0.0010 (9) |
| C4 | 0.0147 (11) | 0.0188 (12) | 0.0249 (13) | −0.0037 (9) | 0.0070 (9) | −0.0054 (10) |
| C3 | 0.0149 (11) | 0.0231 (13) | 0.0181 (12) | 0.0001 (9) | 0.0017 (9) | −0.0031 (9) |
| C5 | 0.0204 (11) | 0.0137 (11) | 0.0194 (12) | −0.0014 (8) | 0.0106 (9) | 0.0005 (9) |
| I1—C5 | 2.089 (2) | C1—C6 | 1.404 (3) |
| O2—C8 | 1.253 (3) | C1—C2 | 1.408 (3) |
| N2—C8 | 1.369 (3) | C1—C7 | 1.460 (3) |
| N2—N1 | 1.369 (3) | C2—C3 | 1.391 (3) |
| N2—H2 | 0.80 (4) | C7—H7 | 0.9500 |
| C8—N3 | 1.333 (3) | C6—C5 | 1.385 (3) |
| N3—H3A | 0.82 (4) | C6—H6 | 0.9500 |
| N3—H3B | 0.81 (4) | C4—C5 | 1.387 (4) |
| N1—C7 | 1.282 (3) | C4—C3 | 1.387 (4) |
| O1—C2 | 1.355 (3) | C4—H4 | 0.9500 |
| O1—H1 | 0.841 (18) | C3—H3 | 0.9500 |
| C8—N2—N1 | 120.5 (2) | C3—C2—C1 | 120.0 (2) |
| C8—N2—H2 | 118 (2) | N1—C7—C1 | 120.9 (2) |
| N1—N2—H2 | 120 (2) | N1—C7—H7 | 119.6 |
| O2—C8—N3 | 122.8 (2) | C1—C7—H7 | 119.6 |
| O2—C8—N2 | 118.5 (2) | C5—C6—C1 | 120.4 (2) |
| N3—C8—N2 | 118.7 (2) | C5—C6—H6 | 119.8 |
| C8—N3—H3A | 121 (3) | C1—C6—H6 | 119.8 |
| C8—N3—H3B | 118 (3) | C5—C4—C3 | 119.9 (2) |
| H3A—N3—H3B | 120 (4) | C5—C4—H4 | 120.0 |
| C7—N1—N2 | 116.5 (2) | C3—C4—H4 | 120.0 |
| C2—O1—H1 | 108 (3) | C4—C3—C2 | 120.4 (2) |
| C6—C1—C2 | 118.8 (2) | C4—C3—H3 | 119.8 |
| C6—C1—C7 | 118.9 (2) | C2—C3—H3 | 119.8 |
| C2—C1—C7 | 122.3 (2) | C6—C5—C4 | 120.4 (2) |
| O1—C2—C3 | 118.2 (2) | C6—C5—I1 | 120.0 (2) |
| O1—C2—C1 | 121.8 (2) | C4—C5—I1 | 119.59 (17) |
| N1—N2—C8—O2 | 169.1 (2) | C2—C1—C6—C5 | 0.2 (4) |
| N1—N2—C8—N3 | −11.9 (3) | C7—C1—C6—C5 | 178.5 (2) |
| C8—N2—N1—C7 | −175.9 (2) | C5—C4—C3—C2 | −0.3 (4) |
| C6—C1—C2—O1 | 178.8 (2) | O1—C2—C3—C4 | −178.8 (2) |
| C7—C1—C2—O1 | 0.6 (4) | C1—C2—C3—C4 | 0.1 (4) |
| C6—C1—C2—C3 | −0.1 (4) | C1—C6—C5—C4 | −0.4 (4) |
| C7—C1—C2—C3 | −178.3 (2) | C1—C6—C5—I1 | −179.51 (18) |
| N2—N1—C7—C1 | 177.8 (2) | C3—C4—C5—C6 | 0.5 (4) |
| C6—C1—C7—N1 | 179.1 (2) | C3—C4—C5—I1 | 179.59 (19) |
| C2—C1—C7—N1 | −2.6 (4) |
| H··· | ||||
| N3—H3 | 0.81 (4) | 2.13 (4) | 2.920 (3) | 163 (3) |
| N2—H2···O2ii | 0.80 (4) | 2.00 (4) | 2.800 (3) | 176 (3) |
| O1—H1···N1 | 0.84 (2) | 1.88 (3) | 2.628 (3) | 147 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.81 (4) | 2.13 (4) | 2.920 (3) | 163 (3) |
| N2—H2⋯O2ii | 0.80 (4) | 2.00 (4) | 2.800 (3) | 176 (3) |
| O1—H1⋯N1 | 0.84 (2) | 1.88 (3) | 2.628 (3) | 147 (4) |
Symmetry codes: (i) ; (ii) .