Literature DB >> 21580118

(E)-3-Hydr-oxy-N'-(2-hydroxy-benzyl-idene)-2-naphthohydrazide.

Hassan Hosseini Monfared, Rahman Bikas, Peter Mayer.   

Abstract

The title compound, C(18)H(14)N(2)O(3), is an aroylhydrazone with an approximately planar structure [dihedral angle of 15.27 (13)° between the benzene ring and the naphthyl ring system], stabilized by intra-molecular N-H⋯O and O-H⋯N hydrogen bonds. Inter-molecular O-H⋯O hydrogen bonds with the keto group as acceptor lead to strands along [100]. In terms of graph-set analysis, the descriptor on the unitary level is C(1) (1)(6)S(6)S(6).

Entities:  

Year:  2009        PMID: 21580118      PMCID: PMC2980095          DOI: 10.1107/S1600536809053793

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For historical background to aroylhydrazones, see: Savanini et al. (2002 ▶); Craliz et al. (1955 ▶); Pickart et al. (1983 ▶); Offe et al. (1952 ▶); Arapov et al. (1987 ▶); Ranford et al. (1998 ▶). For related structures, see: Liu et al. (2004 ▶); Lei et al. (2008 ▶). For graph-set analysis of hydrogen-bond networks, see: Bernstein et al. (1995 ▶); Etter et al. (1990 ▶).

Experimental

Crystal data

C18H14N2O3 M = 306.32 Orthorhombic, a = 12.6749 (4) Å b = 4.9666 (1) Å c = 22.7299 (6) Å V = 1430.87 (7) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 200 K 0.50 × 0.10 × 0.09 mm

Data collection

Nonius KappaCCD diffractometer 10328 measured reflections 1676 independent reflections 1416 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.095 S = 1.09 1676 reflections 220 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: COLLECT (Hooft, 2004 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809053793/bg2308sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809053793/bg2308Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14N2O3F(000) = 640
Mr = 306.32Dx = 1.422 (1) Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 5508 reflections
a = 12.6749 (4) Åθ = 3.1–27.5°
b = 4.9666 (1) ŵ = 0.10 mm1
c = 22.7299 (6) ÅT = 200 K
V = 1430.87 (7) Å3Rod, yellow
Z = 40.50 × 0.10 × 0.09 mm
Nonius KappaCCD diffractometer1416 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.054
MONTEL, graded multilayered X-ray opticsθmax = 27.4°, θmin = 3.3°
Detector resolution: 9 pixels mm-1h = −16→16
CCD; rotation images; thick slices, phi/ω–scank = −6→6
10328 measured reflectionsl = −29→29
1676 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.052P)2 + 0.1709P] where P = (Fo2 + 2Fc2)/3
1676 reflections(Δ/σ)max < 0.001
220 parametersΔρmax = 0.16 e Å3
1 restraintΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on all data will be even larger.
xyzUiso*/Ueq
O10.23226 (13)0.2694 (4)0.22862 (9)0.0383 (4)
O20.31563 (16)−0.3045 (5)0.09755 (11)0.0533 (6)
H20.280 (4)−0.182 (9)0.124 (2)0.092 (14)*
O3−0.08649 (14)0.4024 (3)0.18929 (8)0.0325 (4)
H3−0.151 (3)0.377 (6)0.1953 (15)0.044 (8)*
N10.09013 (15)0.1311 (4)0.17680 (9)0.0283 (4)
H10.019 (2)0.157 (5)0.1723 (13)0.037 (7)*
N20.14658 (15)−0.0532 (4)0.14425 (8)0.0290 (4)
C10.13752 (17)0.2878 (5)0.21681 (10)0.0258 (5)
C20.06987 (17)0.4915 (5)0.24682 (10)0.0250 (5)
C3−0.03790 (17)0.5489 (5)0.23284 (10)0.0255 (5)
C4−0.09057 (18)0.7497 (5)0.26178 (11)0.0283 (5)
H4−0.16120.78970.25090.034*
C5−0.04258 (17)0.8986 (5)0.30734 (10)0.0272 (5)
C6−0.0956 (2)1.1070 (5)0.33832 (11)0.0332 (6)
H6−0.16601.15240.32800.040*
C7−0.0461 (2)1.2432 (5)0.38286 (11)0.0353 (6)
H7−0.08281.38070.40350.042*
C80.0589 (2)1.1808 (6)0.39843 (12)0.0380 (6)
H80.09251.27610.42940.046*
C90.1119 (2)0.9845 (5)0.36906 (11)0.0344 (6)
H90.18270.94430.37970.041*
C100.06327 (18)0.8391 (5)0.32300 (10)0.0279 (5)
C110.11661 (18)0.6368 (5)0.29118 (11)0.0282 (5)
H110.18800.59940.30080.034*
C120.0899 (2)−0.1961 (5)0.10947 (11)0.0301 (5)
H120.0156−0.16970.10930.036*
C130.1346 (2)−0.3955 (5)0.07051 (10)0.0310 (5)
C140.2435 (2)−0.4434 (6)0.06574 (12)0.0372 (6)
C150.2796 (2)−0.6364 (7)0.02599 (16)0.0501 (7)
H150.3532−0.66560.02160.060*
C160.2097 (3)−0.7845 (6)−0.00686 (14)0.0488 (8)
H160.2356−0.9187−0.03290.059*
C170.1027 (3)−0.7416 (5)−0.00265 (13)0.0450 (7)
H170.0548−0.8429−0.02590.054*
C180.0665 (2)−0.5492 (5)0.03591 (11)0.0388 (6)
H18−0.0073−0.52010.03910.047*
U11U22U33U12U13U23
O10.0226 (8)0.0433 (10)0.0489 (10)0.0037 (7)−0.0027 (8)−0.0084 (9)
O20.0286 (10)0.0615 (14)0.0697 (15)0.0054 (9)−0.0018 (10)−0.0210 (12)
O30.0207 (8)0.0394 (10)0.0373 (10)−0.0008 (7)−0.0018 (7)−0.0050 (8)
N10.0209 (9)0.0316 (10)0.0324 (10)0.0024 (8)0.0015 (8)−0.0025 (8)
N20.0265 (9)0.0297 (10)0.0309 (10)0.0024 (8)0.0038 (8)0.0004 (8)
C10.0216 (10)0.0267 (11)0.0290 (12)0.0000 (9)0.0025 (9)0.0035 (10)
C20.0218 (11)0.0243 (12)0.0288 (11)−0.0016 (9)0.0026 (9)0.0038 (9)
C30.0228 (11)0.0268 (11)0.0270 (11)−0.0034 (9)−0.0004 (9)0.0021 (10)
C40.0213 (10)0.0295 (12)0.0340 (12)0.0016 (9)0.0003 (9)0.0056 (10)
C50.0266 (11)0.0260 (12)0.0292 (11)−0.0020 (9)0.0012 (9)0.0044 (9)
C60.0321 (12)0.0314 (13)0.0362 (14)0.0010 (10)0.0045 (10)0.0029 (11)
C70.0439 (14)0.0290 (13)0.0330 (13)0.0009 (11)0.0056 (11)−0.0026 (11)
C80.0447 (15)0.0367 (14)0.0326 (13)−0.0053 (12)−0.0032 (12)−0.0016 (11)
C90.0341 (12)0.0335 (13)0.0357 (13)−0.0029 (10)−0.0065 (11)0.0020 (11)
C100.0289 (12)0.0263 (12)0.0285 (12)−0.0030 (10)−0.0008 (10)0.0036 (10)
C110.0238 (11)0.0293 (12)0.0315 (12)−0.0007 (9)−0.0016 (9)0.0023 (10)
C120.0270 (11)0.0311 (13)0.0320 (11)0.0009 (10)0.0028 (10)0.0020 (11)
C130.0338 (12)0.0287 (13)0.0305 (13)0.0016 (9)0.0028 (10)0.0023 (10)
C140.0335 (12)0.0361 (15)0.0419 (14)0.0007 (10)0.0018 (11)−0.0029 (12)
C150.0440 (16)0.0484 (17)0.0577 (17)0.0120 (13)0.0099 (15)−0.0050 (15)
C160.072 (2)0.0361 (15)0.0389 (15)0.0052 (14)0.0104 (14)−0.0061 (13)
C170.062 (2)0.0370 (15)0.0365 (15)−0.0039 (14)−0.0021 (13)−0.0023 (13)
C180.0411 (14)0.0380 (15)0.0372 (13)−0.0031 (11)−0.0018 (12)−0.0019 (12)
O1—C11.234 (3)C7—H70.9500
O2—C141.354 (3)C8—C91.360 (4)
O2—H20.96 (5)C8—H80.9500
O3—C31.374 (3)C9—C101.413 (3)
O3—H30.84 (4)C9—H90.9500
N1—C11.339 (3)C10—C111.411 (3)
N1—N21.378 (3)C11—H110.9500
N1—H10.92 (3)C12—C131.444 (3)
N2—C121.283 (3)C12—H120.9500
C1—C21.491 (3)C13—C181.395 (3)
C2—C111.374 (3)C13—C141.405 (3)
C2—C31.431 (3)C14—C151.394 (4)
C3—C41.368 (3)C15—C161.372 (5)
C4—C51.410 (3)C15—H150.9500
C4—H40.9500C16—C171.377 (5)
C5—C101.419 (3)C16—H160.9500
C5—C61.421 (3)C17—C181.375 (4)
C6—C71.369 (4)C17—H170.9500
C6—H60.9500C18—H180.9500
C7—C81.411 (4)
C14—O2—H2110 (3)C8—C9—C10121.0 (2)
C3—O3—H3114 (2)C8—C9—H9119.5
C1—N1—N2121.20 (19)C10—C9—H9119.5
C1—N1—H1115.9 (18)C11—C10—C9122.3 (2)
N2—N1—H1122.9 (18)C11—C10—C5118.2 (2)
C12—N2—N1114.05 (19)C9—C10—C5119.5 (2)
O1—C1—N1122.8 (2)C2—C11—C10122.9 (2)
O1—C1—C2120.7 (2)C2—C11—H11118.5
N1—C1—C2116.55 (19)C10—C11—H11118.5
C11—C2—C3118.0 (2)N2—C12—C13122.5 (2)
C11—C2—C1116.35 (19)N2—C12—H12118.8
C3—C2—C1125.6 (2)C13—C12—H12118.8
C4—C3—O3120.88 (19)C18—C13—C14118.1 (2)
C4—C3—C2120.3 (2)C18—C13—C12118.6 (2)
O3—C3—C2118.84 (19)C14—C13—C12123.3 (2)
C3—C4—C5121.6 (2)O2—C14—C15118.4 (2)
C3—C4—H4119.2O2—C14—C13122.4 (2)
C5—C4—H4119.2C15—C14—C13119.2 (3)
C4—C5—C10118.9 (2)C16—C15—C14120.7 (3)
C4—C5—C6122.8 (2)C16—C15—H15119.7
C10—C5—C6118.3 (2)C14—C15—H15119.7
C7—C6—C5120.7 (2)C15—C16—C17121.0 (3)
C7—C6—H6119.7C15—C16—H16119.5
C5—C6—H6119.7C17—C16—H16119.5
C6—C7—C8120.6 (2)C18—C17—C16118.7 (3)
C6—C7—H7119.7C18—C17—H17120.6
C8—C7—H7119.7C16—C17—H17120.6
C9—C8—C7120.0 (2)C17—C18—C13122.2 (3)
C9—C8—H8120.0C17—C18—H18118.9
C7—C8—H8120.0C13—C18—H18118.9
C1—N1—N2—C12177.3 (2)C4—C5—C10—C111.4 (3)
N2—N1—C1—O1−3.1 (3)C6—C5—C10—C11−178.4 (2)
N2—N1—C1—C2176.38 (18)C4—C5—C10—C9−179.2 (2)
O1—C1—C2—C11−5.6 (3)C6—C5—C10—C91.0 (3)
N1—C1—C2—C11174.9 (2)C3—C2—C11—C10−0.3 (3)
O1—C1—C2—C3173.6 (2)C1—C2—C11—C10179.0 (2)
N1—C1—C2—C3−5.9 (3)C9—C10—C11—C2179.1 (2)
C11—C2—C3—C42.3 (3)C5—C10—C11—C2−1.5 (3)
C1—C2—C3—C4−177.0 (2)N1—N2—C12—C13178.3 (2)
C11—C2—C3—O3−178.9 (2)N2—C12—C13—C18177.4 (2)
C1—C2—C3—O31.8 (3)N2—C12—C13—C14−2.4 (4)
O3—C3—C4—C5178.8 (2)C18—C13—C14—O2−179.9 (3)
C2—C3—C4—C5−2.4 (4)C12—C13—C14—O2−0.1 (4)
C3—C4—C5—C100.5 (3)C18—C13—C14—C151.5 (4)
C3—C4—C5—C6−179.7 (2)C12—C13—C14—C15−178.7 (3)
C4—C5—C6—C7179.0 (2)O2—C14—C15—C16179.3 (3)
C10—C5—C6—C7−1.2 (3)C13—C14—C15—C16−2.1 (5)
C5—C6—C7—C80.7 (4)C14—C15—C16—C171.8 (5)
C6—C7—C8—C90.1 (4)C15—C16—C17—C18−0.9 (4)
C7—C8—C9—C10−0.3 (4)C16—C17—C18—C130.4 (4)
C8—C9—C10—C11179.1 (2)C14—C13—C18—C17−0.7 (4)
C8—C9—C10—C5−0.2 (4)C12—C13—C18—C17179.5 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2···N20.96 (5)1.87 (5)2.697 (3)142 (4)
O3—H3···O1i0.84 (4)1.81 (4)2.609 (2)157 (3)
N1—H1···O30.92 (3)1.85 (3)2.628 (3)141 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N20.96 (5)1.87 (5)2.697 (3)142 (4)
O3—H3⋯O1i0.84 (4)1.81 (4)2.609 (2)157 (3)
N1—H1⋯O30.92 (3)1.85 (3)2.628 (3)141 (2)

Symmetry code: (i) .

  8 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

3.  Synthesis and anti-tubercular evaluation of 4-quinolylhydrazones.

Authors:  Luisa Savini; Luisa Chiasserini; Alessandra Gaeta; Cesare Pellerano
Journal:  Bioorg Med Chem       Date:  2002-07       Impact factor: 3.641

4.  Dicopper(II) Complexes of the Antitumor Analogues Acylbis(salicylaldehyde hydrazones) and Crystal Structures of Monomeric [Cu(2)(1,3-propanedioyl bis(salicylaldehyde hydrazone))(H(2)O)(2)].(ClO(4))(2).3H(2)O and Polymeric [{Cu(2)(1,6-hexanedioyl bis(salicylaldehyde hydrazone))(C(2)H(5)OH)(2)}(m)()].(ClO(4))(2)(m)().m(C(2)H(5)OH).

Authors:  John D. Ranford; Jagadese J. Vittal; Yu M. Wang
Journal:  Inorg Chem       Date:  1998-03-23       Impact factor: 5.165

5.  N'-(3-Eth-oxy-2-hydroxy-benzyl-idene)-3-hydroxy-naphthalene-2-carbohydrazide.

Authors:  Jun-Tao Lei; Yan-Xia Jiang; Li-Yan Tao; Shan-Shan Huang; Hou-Li Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26

6.  Inhibition of the growth of cultured cells and an implanted fibrosarcoma by aroylhydrazone analogs of the Gly-His-Lys-Cu(II) complex.

Authors:  L Pickart; W H Goodwin; W Burgua; T B Murphy; D K Johnson
Journal:  Biochem Pharmacol       Date:  1983-12-15       Impact factor: 5.858

7.  [Radioprotective efficacy of acyl hydrazones].

Authors:  O V Arapov; O F Alferova; E I Levocheskaia; I I Krasil'nikov
Journal:  Radiobiologiia       Date:  1987 Nov-Dec

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  6 in total

1.  (2Z,N'E)-N'-[(2-Hy-droxy-1-naphth-yl)methyl-idene]furan-2-carbohydrazonic acid.

Authors:  Rahman Bikas; Hassan Hosseini Monfared; Keyvan Bijanzad; Ahmet Koroglu; Canan Kazak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-21

2.  (E)-N'-(2-Hy-droxy-benzyl-idene)furan-2-carbohydrazide.

Authors:  Rahman Bikas; Hassan Hosseini Monfared; Canan Kazak; N Burcu Arslan; Keyvan Bijanzad
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-14

3.  (E)-4-{2-[(2-Hy-droxy-naphthalen-1-yl)methyl-idene]hydrazinecarbon-yl}pyridinium nitrate.

Authors:  Rahman Bikas; Hassan Hosseini Monfared; Tadeusz Lis; Milosz Siczek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11

4.  (E,E)-N'-{4-[(2-Benzoyl-hydrazin-1-yl-idene)meth-yl]benzyl-idene}benzo-hydrazide.

Authors:  Ramin Karimian; Hassan Hosseini-Monfared; Rahman Bikas; N Burcu Arslan; Canan Kazak; Ahmet Koroglu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-18

5.  (E)-4-Hy-droxy-N'-(2-hy-droxy-5-iodo-benzyl-idene)benzohydrazide methanol monosolvate.

Authors:  Parisa Mahboubi Anarjan; Hassan Hosseini Monfared; N Burcu Arslan; Canan Kazak; Rahman Bikas
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-11

6.  (E)-2-(2-Hy-droxy-5-iodo-benzyl-idene)hydrazinecarboxamide.

Authors:  Rahman Bikas; Samra Nikbakht Sardari; Seyed Sajjad Hosseini; Gholam Hossein Shahverdizadeh; Behrouz Notash
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-17
  6 in total

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