Literature DB >> 22259476

2-[((E)-2-{2-[(E)-2-Hy-droxy-benzyl-idene]hydrazinecarbon-yl}hydrazinyl-idene)meth-yl]phenol.

Rahman Bikas, Parisa Mahboubi Anarjan, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The mol-ecule of the title compound, C(15)H(14)N(4)O(3), is completed by the application of crystallographic twofold symmetry, with the carbonyl group lying on the rotation axis. The mol-ecule is close to planar: the greatest deviation of a torsion angle from 0° is 7.3 (2)° about the bond linking the phenol ring to the rest of the mol-ecule. An intra-molecular O-H⋯N(imine) hydrogen bond is formed in each half of the mol-ecule. The carbonyl O atom is anti with respect to the amine H atoms and this allows for the formation of N-H⋯O(hydrox-yl) hydrogen bonds in the crystal, which results in supra-molecular layers lying parallel to (100).

Entities:  

Year:  2011        PMID: 22259476      PMCID: PMC3254530          DOI: 10.1107/S1600536811053268

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of related carbohydrazides, see: Bikas et al. (2010a ▶,b ▶).

Experimental

Crystal data

C15H14N4O3 M = 298.30 Orthorhombic, a = 14.3101 (4) Å b = 9.3620 (2) Å c = 10.2697 (2) Å V = 1375.84 (6) Å3 Z = 4 Cu Kα radiation μ = 0.86 mm−1 T = 100 K 0.25 × 0.25 × 0.10 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010 ▶) T min = 0.342, T max = 1.000 2323 measured reflections 757 independent reflections 750 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.075 S = 1.10 757 reflections 110 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.16 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrysAlis PRO (Agilent, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811053268/hb6561sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811053268/hb6561Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811053268/hb6561Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N4O3F(000) = 624
Mr = 298.30Dx = 1.440 Mg m3
Orthorhombic, Aba2Cu Kα radiation, λ = 1.54178 Å
Hall symbol: A 2 -2acCell parameters from 1858 reflections
a = 14.3101 (4) Åθ = 3.1–76.5°
b = 9.3620 (2) ŵ = 0.86 mm1
c = 10.2697 (2) ÅT = 100 K
V = 1375.84 (6) Å3Prism, colourless
Z = 40.25 × 0.25 × 0.10 mm
Agilent SuperNova Dual diffractometer with an Atlas detector757 independent reflections
Radiation source: SuperNova (Cu) X-ray Source750 reflections with I > 2σ(I)
MirrorRint = 0.014
Detector resolution: 10.4041 pixels mm-1θmax = 76.7°, θmin = 6.2°
ω scanh = −17→17
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2010)k = −11→10
Tmin = 0.342, Tmax = 1.000l = −10→12
2323 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.075w = 1/[σ2(Fo2) + (0.0579P)2 + 0.2173P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
757 reflectionsΔρmax = 0.16 e Å3
110 parametersΔρmin = −0.21 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0051 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.50000.50000.50067 (16)0.0218 (4)
O20.59665 (8)0.87891 (12)0.43307 (12)0.0197 (3)
N10.52439 (9)0.61383 (13)0.69670 (15)0.0186 (3)
N20.55917 (9)0.73346 (13)0.63891 (13)0.0170 (3)
C10.50000.50000.6191 (2)0.0174 (4)
C20.57681 (11)0.84255 (16)0.71089 (15)0.0172 (3)
H2A0.56460.83950.80180.021*
C30.61574 (10)0.97076 (15)0.65176 (15)0.0159 (4)
C40.64432 (11)1.08454 (17)0.73122 (16)0.0191 (4)
H40.63801.07690.82300.023*
C50.68171 (11)1.20828 (18)0.67764 (18)0.0211 (4)
H50.70091.28470.73240.025*
C60.69086 (11)1.21928 (18)0.54321 (19)0.0219 (4)
H60.71651.30360.50620.026*
C70.66290 (11)1.10842 (16)0.46270 (15)0.0195 (4)
H70.66981.11690.37100.023*
C80.62482 (9)0.98474 (16)0.51579 (14)0.0159 (4)
H10.5006 (17)0.614 (2)0.777 (3)0.023 (5)*
H20.579 (2)0.809 (3)0.481 (3)0.051 (8)*
U11U22U33U12U13U23
O10.0307 (8)0.0208 (7)0.0138 (8)−0.0031 (6)0.0000.000
O20.0260 (6)0.0186 (5)0.0146 (5)−0.0020 (4)−0.0006 (5)−0.0009 (4)
N10.0253 (7)0.0169 (7)0.0136 (6)−0.0027 (5)0.0024 (5)0.0014 (5)
N20.0183 (6)0.0166 (7)0.0160 (7)0.0001 (5)−0.0004 (5)0.0014 (5)
C10.0181 (10)0.0175 (10)0.0167 (10)0.0017 (7)0.0000.000
C20.0176 (6)0.0190 (7)0.0149 (7)0.0010 (5)−0.0001 (5)0.0002 (6)
C30.0147 (7)0.0180 (7)0.0150 (7)0.0022 (6)−0.0004 (6)0.0005 (6)
C40.0181 (7)0.0219 (8)0.0174 (8)0.0007 (6)−0.0004 (6)−0.0010 (7)
C50.0195 (7)0.0197 (8)0.0241 (8)−0.0025 (5)0.0002 (6)−0.0040 (6)
C60.0186 (8)0.0209 (8)0.0261 (9)−0.0031 (5)0.0009 (7)0.0035 (7)
C70.0190 (7)0.0230 (7)0.0166 (8)−0.0003 (6)0.0009 (6)0.0027 (6)
C80.0136 (7)0.0181 (7)0.0161 (9)0.0016 (5)−0.0009 (6)−0.0003 (6)
O1—C11.217 (3)C3—C41.403 (2)
O2—C81.3660 (19)C3—C81.408 (2)
O2—H20.86 (3)C4—C51.390 (2)
N1—N21.3617 (16)C4—H40.9500
N1—C11.3754 (19)C5—C61.391 (3)
N1—H10.89 (3)C5—H50.9500
N2—C21.2857 (19)C6—C71.386 (2)
C1—N1i1.3754 (19)C6—H60.9500
C2—C31.456 (2)C7—C81.391 (2)
C2—H2A0.9500C7—H70.9500
C8—O2—H2106 (2)C5—C4—H4119.5
N2—N1—C1118.53 (14)C3—C4—H4119.5
N2—N1—H1122.6 (13)C4—C5—C6119.41 (17)
C1—N1—H1116.2 (14)C4—C5—H5120.3
C2—N2—N1118.33 (13)C6—C5—H5120.3
O1—C1—N1125.38 (10)C7—C6—C5120.64 (16)
O1—C1—N1i125.38 (10)C7—C6—H6119.7
N1—C1—N1i109.2 (2)C5—C6—H6119.7
N2—C2—C3119.35 (14)C6—C7—C8120.17 (15)
N2—C2—H2A120.3C6—C7—H7119.9
C3—C2—H2A120.3C8—C7—H7119.9
C4—C3—C8118.64 (14)O2—C8—C7118.40 (14)
C4—C3—C2119.67 (14)O2—C8—C3121.46 (14)
C8—C3—C2121.69 (14)C7—C8—C3120.14 (14)
C5—C4—C3120.99 (16)
C1—N1—N2—C2176.05 (12)C4—C5—C6—C70.1 (2)
N2—N1—C1—O1−5.97 (14)C5—C6—C7—C80.3 (2)
N2—N1—C1—N1i174.03 (14)C6—C7—C8—O2178.90 (13)
N1—N2—C2—C3178.82 (12)C6—C7—C8—C3−0.9 (2)
N2—C2—C3—C4−173.31 (13)C4—C3—C8—O2−178.76 (13)
N2—C2—C3—C87.3 (2)C2—C3—C8—O20.6 (2)
C8—C3—C4—C5−0.6 (2)C4—C3—C8—C71.1 (2)
C2—C3—C4—C5−179.99 (13)C2—C3—C8—C7−179.58 (13)
C3—C4—C5—C60.0 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2···N20.86 (3)1.79 (4)2.5710 (17)150 (3)
N1—H1···O2ii0.89 (3)2.12 (3)2.983 (2)161 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯N20.86 (3)1.79 (4)2.5710 (17)150 (3)
N1—H1⋯O2i0.89 (3)2.12 (3)2.983 (2)161 (2)

Symmetry code: (i) .

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