Literature DB >> 22483116

Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics.

Devrani Mitra1, Xiaojing Yang, Keith Moffat.   

Abstract

Aureochrome1, a signaling photoreceptor from a eukaryotic photosynthetic stramenopile, confers blue-light-regulated DNA binding on the organism. Its topology, in which a C-terminal LOV sensor domain is linked to an N-terminal DNA-binding bZIP effector domain, contrasts with the reverse sensor-effector topology in most other known LOV-photoreceptors. How, then, is signal transmitted in Aureochrome1? The dark- and light-state crystal structures of Aureochrome1 LOV domain (AuLOV) show that its helical N- and C-terminal flanking regions are packed against the external surface of the core β sheet, opposite to the FMN chromophore on the internal surface. Light-induced conformational changes occur in the quaternary structure of the AuLOV dimer and in Phe298 of the Hβ strand in the core. The properties of AuLOV extend the applicability of LOV domains as versatile design modules that permit fusion to effector domains via either the N- or C-termini to confer blue-light sensitivity.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22483116      PMCID: PMC3322389          DOI: 10.1016/j.str.2012.02.016

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  52 in total

Review 1.  Phototropins 1 and 2: versatile plant blue-light receptors.

Authors:  Winslow R Briggs; John M Christie
Journal:  Trends Plant Sci       Date:  2002-05       Impact factor: 18.313

2.  The LOV domain family: photoresponsive signaling modules coupled to diverse output domains.

Authors:  Sean Crosson; Sudarshan Rajagopal; Keith Moffat
Journal:  Biochemistry       Date:  2003-01-14       Impact factor: 3.162

Review 3.  Light signal transduction in higher plants.

Authors:  Meng Chen; Joanne Chory; Christian Fankhauser
Journal:  Annu Rev Genet       Date:  2004       Impact factor: 16.830

4.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

5.  Arabidopsis NPH1: a protein kinase with a putative redox-sensing domain.

Authors:  E Huala; P W Oeller; E Liscum; I S Han; E Larsen; W R Briggs
Journal:  Science       Date:  1997-12-19       Impact factor: 47.728

6.  FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis.

Authors:  D C Nelson; J Lasswell; L E Rogg; M A Cohen; B Bartel
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

7.  Conformational switching in the fungal light sensor Vivid.

Authors:  Brian D Zoltowski; Carsten Schwerdtfeger; Joanne Widom; Jennifer J Loros; Alexandrine M Bilwes; Jay C Dunlap; Brian R Crane
Journal:  Science       Date:  2007-05-18       Impact factor: 47.728

8.  Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes.

Authors:  Mié Ishikawa; Fumio Takahashi; Hisayoshi Nozaki; Chikako Nagasato; Taizo Motomura; Hironao Kataoka
Journal:  Planta       Date:  2009-06-21       Impact factor: 4.116

9.  Optogenetics.

Authors:  Karl Deisseroth
Journal:  Nat Methods       Date:  2010-12-20       Impact factor: 28.547

10.  Fluorescent protein spectra.

Authors:  G Patterson; R N Day; D Piston
Journal:  J Cell Sci       Date:  2001-03       Impact factor: 5.285

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  27 in total

Review 1.  Blue-light-regulated transcription factor, Aureochrome, in photosynthetic stramenopiles.

Authors:  Fumio Takahashi
Journal:  J Plant Res       Date:  2016-01-18       Impact factor: 2.629

2.  In-cell infrared difference spectroscopy of LOV photoreceptors reveals structural responses to light altered in living cells.

Authors:  Lukas Goett-Zink; Jessica L Klocke; Lena A K Bögeholz; Tilman Kottke
Journal:  J Biol Chem       Date:  2020-06-24       Impact factor: 5.157

3.  AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum).

Authors:  Marie J J Huysman; Antonio E Fortunato; Michiel Matthijs; Benjamin Schellenberger Costa; Rudy Vanderhaeghen; Hilde Van den Daele; Matthias Sachse; Dirk Inzé; Chris Bowler; Peter G Kroth; Christian Wilhelm; Angela Falciatore; Wim Vyverman; Lieven De Veylder
Journal:  Plant Cell       Date:  2013-01-04       Impact factor: 11.277

4.  Spatio-temporally precise activation of engineered receptor tyrosine kinases by light.

Authors:  Michael Grusch; Karin Schelch; Robert Riedler; Eva Reichhart; Christopher Differ; Walter Berger; Álvaro Inglés-Prieto; Harald Janovjak
Journal:  EMBO J       Date:  2014-07-01       Impact factor: 11.598

5.  Evolution of PAS domains and PAS-containing genes in eukaryotes.

Authors:  Qiming Mei; Volodymyr Dvornyk
Journal:  Chromosoma       Date:  2014-04-04       Impact factor: 4.316

Review 6.  Following Optogenetic Dimerizers and Quantitative Prospects.

Authors:  Jacqueline Niu; Manu Ben Johny; Ivy E Dick; Takanari Inoue
Journal:  Biophys J       Date:  2016-08-17       Impact factor: 4.033

7.  Isolation, expression, and characterization of blue light receptor AUREOCHROME gene from Saccharina japonica (Laminariales, Phaeophyceae).

Authors:  Yunyan Deng; Jianting Yao; Gang Fu; Hui Guo; Delin Duan
Journal:  Mar Biotechnol (NY)       Date:  2013-09-20       Impact factor: 3.619

Review 8.  Engineering genetically-encoded tools for optogenetic control of protein activity.

Authors:  Qi Liu; Chandra L Tucker
Journal:  Curr Opin Chem Biol       Date:  2017-05-17       Impact factor: 8.822

9.  Blue light-induced dimerization of monomeric aureochrome-1 enhances its affinity for the target sequence.

Authors:  Osamu Hisatomi; Yoichi Nakatani; Ken Takeuchi; Fumio Takahashi; Hironao Kataoka
Journal:  J Biol Chem       Date:  2014-05-01       Impact factor: 5.157

Review 10.  Optogenetic control of cell function using engineered photoreceptors.

Authors:  Gopal P Pathak; Justin D Vrana; Chandra L Tucker
Journal:  Biol Cell       Date:  2012-12-21       Impact factor: 4.458

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