Literature DB >> 24052494

Isolation, expression, and characterization of blue light receptor AUREOCHROME gene from Saccharina japonica (Laminariales, Phaeophyceae).

Yunyan Deng1, Jianting Yao, Gang Fu, Hui Guo, Delin Duan.   

Abstract

Photosynthetic stramenopile have chloroplasts of secondary endosymbiotic origin and are significant as aquatic primary productivity and biomass production. In marine environments, many photosynthetic stramenopiles utilize blue light to regulate growth, development, and organelle movement. Aureochrome (AUREO) is a new type blue light photoreceptor specific in photosynthetic stramenopiles. Previously, several AUREO orthologs were reported in genomes of stramenopile members, but the full-length cDNA sequences were completed only in Vaucheria frigida (Xanthophyceae), Fucus distichus (Phaeophyceae), and Ochromonas danica (Chrysophyceae). In this study, the full-length cDNA of AUREO from Saccharina japonica (designated as SjAUREO) was isolated based on homologous cloning and the rapid amplification of cDNA ends (RACE). It characterized by the full length of 1,013 bp with an open reading frame of 612 bp, which encoded a polypeptide of 203 amino acids with predicted molecular weight of 23.08 kDa and theoretical isoelectric point of 7.63. The deduced amino acid sequence of SjAUREO contained one N-terminal basic region/leucine zipper (bZIP) transcription regulation domain and a single light-, oxygen-, or voltage-sensitive (LOV) domain near the C-terminus. Homologous analysis showed that SjAUREO shared 40-92 % similarities with those of other photosynthetic stramenopiles. Phylogenetic analysis revealed close phylogenetic affinity between SjAUREO and AUREO4 of brown alga Ectocarpus siliculosus. Real-time PCR detection revealed that the SjAUREO transcription was markedly increased under BL exposure and dramatically upregulated in the 1-month juvenile sporophyte than those in the 2 and 3-month materials, which indirectly reflected the SjAUREO associated with the BL-mediated photomorphogenesis during the growth and early development of juvenile sporophytes. In vitro expression showed one distinct band existed at ∼27 kDa, and western blot detection proved that it was positive to the anti-His antibody with high specificity. Our results enriched the knowledge of AUREO properties in S. japonica and provided clues to explore the mechanisms underlying diverse physiological responses mediated by BL photoreceptors AUREO in the photosynthetic stramenopiles.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24052494     DOI: 10.1007/s10126-013-9539-7

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  39 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Functional conservation of light, oxygen, or voltage domains in light sensing.

Authors:  Ping Cheng; Qiyang He; Yuhong Yang; Lixin Wang; Yi Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-28       Impact factor: 11.205

3.  A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids.

Authors:  Jan Janouskovec; Ales Horák; Miroslav Oborník; Julius Lukes; Patrick J Keeling
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

5.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

6.  Structure of a flavin-binding plant photoreceptor domain: insights into light-mediated signal transduction.

Authors:  S Crosson; K Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

7.  Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors.

Authors:  Andrea Ehlert; Fridtjof Weltmeier; Xuan Wang; Caroline S Mayer; Sjef Smeekens; Jesús Vicente-Carbajosa; Wolfgang Dröge-Laser
Journal:  Plant J       Date:  2006-06       Impact factor: 6.417

8.  Blue light-induced conformational changes in a light-regulated transcription factor, aureochrome-1.

Authors:  Osamu Hisatomi; Ken Takeuchi; Kazunori Zikihara; Yuki Ookubo; Yoichi Nakatani; Fumio Takahashi; Satoru Tokutomi; Hironao Kataoka
Journal:  Plant Cell Physiol       Date:  2012-12-04       Impact factor: 4.927

9.  Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes.

Authors:  Mié Ishikawa; Fumio Takahashi; Hisayoshi Nozaki; Chikako Nagasato; Taizo Motomura; Hironao Kataoka
Journal:  Planta       Date:  2009-06-21       Impact factor: 4.116

Review 10.  Phototropin blue-light receptors.

Authors:  John M Christie
Journal:  Annu Rev Plant Biol       Date:  2007       Impact factor: 26.379

View more
  4 in total

1.  Blue light-induced dimerization of monomeric aureochrome-1 enhances its affinity for the target sequence.

Authors:  Osamu Hisatomi; Yoichi Nakatani; Ken Takeuchi; Fumio Takahashi; Hironao Kataoka
Journal:  J Biol Chem       Date:  2014-05-01       Impact factor: 5.157

2.  Blue light-induced LOV domain dimerization enhances the affinity of Aureochrome 1a for its target DNA sequence.

Authors:  Udo Heintz; Ilme Schlichting
Journal:  Elife       Date:  2016-01-12       Impact factor: 8.140

3.  Sexual Difference in the Optimum Environmental Conditions for Growth and Maturation of the Brown Alga Undaria pinnatifida in the Gametophyte Stage.

Authors:  Yoichi Sato; Hikaru Endo; Hiroki Oikawa; Koichi Kanematsu; Hiroyuki Naka; Miho Mogamiya; Shigeyuki Kawano; Yusuke Kazama
Journal:  Genes (Basel)       Date:  2020-08-16       Impact factor: 4.096

4.  Quantitative analyses of the equilibria among DNA complexes of a blue-light-regulated bZIP module, Photozipper.

Authors:  Yoichi Nakatani; Osamu Hisatomi
Journal:  Biophys Physicobiol       Date:  2018-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.