Literature DB >> 22432617

Metabolic engineering for the production of natural products.

Lauren B Pickens1, Yi Tang, Yit-Heng Chooi.   

Abstract

Natural products and their derivatives play an important role in modern healthcare as frontline treatments for many diseases and as inspiration for chemically synthesized therapeutics. With advances in sequencing and recombinant DNA technology, many of the biosynthetic pathways responsible for the production of these chemically complex yet valuable compounds have been elucidated. With an ever-expanding toolkit of biosynthetic components, metabolic engineering is an increasingly powerful method to improve natural product titers and generate novel compounds. Heterologous production platforms have enabled access to pathways from difficult to culture strains, systems biology and metabolic modeling tools have resulted in increasing predictive and analytic capabilities, advances in expression systems and regulation have enabled the fine-tuning of pathways for increased efficiency, and characterization of individual pathway components has facilitated the construction of hybrid pathways for the production of new compounds. These advances in the many aspects of metabolic engineering not only have yielded fascinating scientific discoveries but also make it an increasingly viable approach for the optimization of natural product biosynthesis.

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Year:  2011        PMID: 22432617      PMCID: PMC4077471          DOI: 10.1146/annurev-chembioeng-061010-114209

Source DB:  PubMed          Journal:  Annu Rev Chem Biomol Eng        ISSN: 1947-5438            Impact factor:   11.059


  150 in total

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Authors:  Carlos Olano; Carmen Méndez; José A Salas
Journal:  Nat Prod Rep       Date:  2010-04       Impact factor: 13.423

2.  First heterologous reconstruction of a complete functional fungal biosynthetic multigene cluster.

Authors:  Mary N Heneghan; Ahmed A Yakasai; Laura M Halo; Zhongshu Song; Andrew M Bailey; Thomas J Simpson; Russell J Cox; Colin M Lazarus
Journal:  Chembiochem       Date:  2010-07-26       Impact factor: 3.164

3.  Biocatalytic asymmetric synthesis of chiral amines from ketones applied to sitagliptin manufacture.

Authors:  Christopher K Savile; Jacob M Janey; Emily C Mundorff; Jeffrey C Moore; Sarena Tam; William R Jarvis; Jeffrey C Colbeck; Anke Krebber; Fred J Fleitz; Jos Brands; Paul N Devine; Gjalt W Huisman; Gregory J Hughes
Journal:  Science       Date:  2010-06-17       Impact factor: 47.728

4.  Genome-minimized Streptomyces host for the heterologous expression of secondary metabolism.

Authors:  Mamoru Komatsu; Takuma Uchiyama; Satoshi Omura; David E Cane; Haruo Ikeda
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-25       Impact factor: 11.205

Review 5.  Genetic engineering of macrolide biosynthesis: past advances, current state, and future prospects.

Authors:  Sung Ryeol Park; Ah Reum Han; Yeon-Hee Ban; Young Ji Yoo; Eun Ji Kim; Yeo Joon Yoon
Journal:  Appl Microbiol Biotechnol       Date:  2009-11-10       Impact factor: 4.813

6.  Engineering fluorometabolite production: fluorinase expression in Salinispora tropica Yields Fluorosalinosporamide.

Authors:  Alessandra S Eustáquio; David O'Hagan; Bradley S Moore
Journal:  J Nat Prod       Date:  2010-03-26       Impact factor: 4.050

7.  Genetically engineered lipopeptide antibiotics related to A54145 and daptomycin with improved properties.

Authors:  Kien T Nguyen; Xiaowei He; Dylan C Alexander; Chen Li; Jian-Qiao Gu; Carmela Mascio; Andrew Van Praagh; Larry Mortin; Min Chu; Jared A Silverman; Paul Brian; Richard H Baltz
Journal:  Antimicrob Agents Chemother       Date:  2010-01-19       Impact factor: 5.191

8.  Improving NADPH availability for natural product biosynthesis in Escherichia coli by metabolic engineering.

Authors:  Joseph A Chemler; Zachary L Fowler; Kyle P McHugh; Mattheos A G Koffas
Journal:  Metab Eng       Date:  2009-07-21       Impact factor: 9.783

Review 9.  Improvement of secondary metabolite production in Streptomyces by manipulating pathway regulation.

Authors:  Yihua Chen; Michael J Smanski; Ben Shen
Journal:  Appl Microbiol Biotechnol       Date:  2010-01-21       Impact factor: 4.813

10.  Self-resistance mechanism in Streptomyces peucetius: overexpression of drrA, drrB and drrC for doxorubicin enhancement.

Authors:  Sailesh Malla; Narayan Prasad Niraula; Kwangkyoung Liou; Jae Kyung Sohng
Journal:  Microbiol Res       Date:  2009-08-03       Impact factor: 5.415

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  65 in total

Review 1.  Nature's combinatorial biosynthesis and recently engineered production of nucleoside antibiotics in Streptomyces.

Authors:  Shawn Chen; William A Kinney; Steven Van Lanen
Journal:  World J Microbiol Biotechnol       Date:  2017-03-04       Impact factor: 3.312

Review 2.  Structure and noncanonical chemistry of nonribosomal peptide biosynthetic machinery.

Authors:  Heather L Condurso; Steven D Bruner
Journal:  Nat Prod Rep       Date:  2012-06-25       Impact factor: 13.423

Review 3.  Engineering synthetic recursive pathways to generate non-natural small molecules.

Authors:  Elizabeth A Felnagle; Asha Chaubey; Elizabeth L Noey; Kendall N Houk; James C Liao
Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

4.  Expanding the structural diversity of polyketides by exploring the cofactor tolerance of an inline methyltransferase domain.

Authors:  Jaclyn M Winter; Grace Chiou; Ian R Bothwell; Wei Xu; Neil K Garg; Minkui Luo; Yi Tang
Journal:  Org Lett       Date:  2013-07-09       Impact factor: 6.005

5.  Accelerating the semisynthesis of alkaloid-based drugs through metabolic engineering.

Authors:  Amy M Ehrenworth; Pamela Peralta-Yahya
Journal:  Nat Chem Biol       Date:  2017-02-15       Impact factor: 15.040

6.  Tools for metabolic engineering in Streptomyces.

Authors:  Valerie Bekker; Amanda Dodd; Dean Brady; Karl Rumbold
Journal:  Bioengineered       Date:  2014 Sep-Oct       Impact factor: 3.269

Review 7.  Optimization of industrial microorganisms: recent advances in synthetic dynamic regulators.

Authors:  Byung Eun Min; Hyun Gyu Hwang; Hyun Gyu Lim; Gyoo Yeol Jung
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-10       Impact factor: 3.346

Review 8.  Augmentation of crop productivity through interventions of omics technologies in India: challenges and opportunities.

Authors:  Rajesh Kumar Pathak; Mamta Baunthiyal; Dinesh Pandey; Anil Kumar
Journal:  3 Biotech       Date:  2018-10-19       Impact factor: 2.406

9.  Engineering of primary metabolic pathways for titer improvement of milbemycins in Streptomyces bingchenggensis.

Authors:  Yuqing Liu; Haiyan Wang; Shanshan Li; Yanyan Zhang; Xu Cheng; Wensheng Xiang; Xiangjing Wang
Journal:  Appl Microbiol Biotechnol       Date:  2021-02-10       Impact factor: 4.813

Review 10.  Regulatory RNAs: charming gene management styles for synthetic biology applications.

Authors:  Jorge Vazquez-Anderson; Lydia M Contreras
Journal:  RNA Biol       Date:  2013-11-18       Impact factor: 4.652

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