| Literature DB >> 22412488 |
Nassir N Al-Mohammed1, Yatimah Alias, Zanariah Abdullah, Hamid Khaledi.
Abstract
In the title compound, C(13)H(16)N(2)O(2), the planes of the benzimidazole ring system and the acetate O-C=O fragment make a dihedral angle of 84.5 (3)°. In the crystal, mol-ecules are connected through C-H⋯N hydrogen bonds to form infinite chains in the [-110] direction.Entities:
Year: 2012 PMID: 22412488 PMCID: PMC3297298 DOI: 10.1107/S1600536812002814
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H16N2O2 | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 1057 reflections |
| θ = 3.6–26.4° | |
| µ = 0.09 mm−1 | |
| β = 96.609 (3)° | Tablet, colourless |
| 0.19 × 0.13 × 0.04 mm | |
| Bruker APEXII CCD diffractometer | 1244 independent reflections |
| Radiation source: fine-focus sealed tube | 1091 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.5°, θmin = 3.6° |
| Absorption correction: multi-scan ( | |
| 3829 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1244 reflections | (Δ/σ)max < 0.001 |
| 157 parameters | Δρmax = 0.17 e Å−3 |
| 2 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0330 (4) | 0.41863 (16) | 0.04890 (10) | 0.0302 (5) | |
| O2 | 0.2082 (3) | 0.59850 (13) | 0.07085 (9) | 0.0174 (4) | |
| N1 | 0.3020 (3) | 0.38525 (17) | −0.05825 (10) | 0.0193 (5) | |
| N2 | 0.3571 (4) | 0.19170 (18) | −0.07541 (12) | 0.0243 (5) | |
| C1 | 0.4419 (5) | 0.2870 (2) | −0.04255 (14) | 0.0227 (6) | |
| H1 | 0.5871 | 0.2872 | −0.0108 | 0.027* | |
| C2 | 0.1057 (4) | 0.3507 (2) | −0.10483 (12) | 0.0183 (5) | |
| C3 | −0.0961 (4) | 0.4127 (2) | −0.13641 (13) | 0.0222 (6) | |
| H3 | −0.1195 | 0.4943 | −0.1282 | 0.027* | |
| C4 | −0.2609 (5) | 0.3489 (2) | −0.18058 (14) | 0.0250 (6) | |
| H4 | −0.4014 | 0.3879 | −0.2035 | 0.030* | |
| C5 | −0.2268 (5) | 0.2281 (2) | −0.19258 (13) | 0.0228 (6) | |
| H5 | −0.3446 | 0.1872 | −0.2232 | 0.027* | |
| C6 | −0.0250 (5) | 0.1677 (2) | −0.16060 (14) | 0.0225 (6) | |
| H6 | −0.0019 | 0.0862 | −0.1690 | 0.027* | |
| C7 | 0.1446 (4) | 0.2301 (2) | −0.11554 (13) | 0.0192 (5) | |
| C8 | 0.3234 (4) | 0.4973 (2) | −0.02268 (13) | 0.0183 (5) | |
| H8A | 0.2671 | 0.5617 | −0.0544 | 0.022* | |
| H8B | 0.4997 | 0.5119 | −0.0056 | 0.022* | |
| C9 | 0.1684 (4) | 0.4977 (2) | 0.03638 (13) | 0.0187 (5) | |
| C10 | 0.0928 (4) | 0.6199 (2) | 0.13424 (13) | 0.0200 (5) | |
| C11 | 0.1856 (5) | 0.5282 (2) | 0.18666 (14) | 0.0264 (6) | |
| H11A | 0.1199 | 0.4505 | 0.1722 | 0.040* | |
| H11B | 0.1293 | 0.5487 | 0.2303 | 0.040* | |
| H11C | 0.3675 | 0.5260 | 0.1914 | 0.040* | |
| C12 | 0.1849 (5) | 0.7429 (2) | 0.15475 (15) | 0.0256 (6) | |
| H12A | 0.3668 | 0.7432 | 0.1612 | 0.038* | |
| H12B | 0.1214 | 0.7655 | 0.1971 | 0.038* | |
| H12C | 0.1257 | 0.7992 | 0.1191 | 0.038* | |
| C13 | −0.1878 (5) | 0.6198 (2) | 0.11925 (15) | 0.0271 (6) | |
| H13A | −0.2380 | 0.6743 | 0.0819 | 0.041* | |
| H13B | −0.2616 | 0.6451 | 0.1596 | 0.041* | |
| H13C | −0.2454 | 0.5400 | 0.1065 | 0.041* |
| O1 | 0.0402 (11) | 0.0241 (10) | 0.0279 (11) | −0.0125 (8) | 0.0109 (9) | −0.0047 (9) |
| O2 | 0.0196 (9) | 0.0158 (8) | 0.0172 (9) | 0.0005 (7) | 0.0035 (7) | −0.0026 (7) |
| N1 | 0.0221 (11) | 0.0165 (10) | 0.0191 (12) | 0.0029 (8) | 0.0013 (9) | −0.0011 (9) |
| N2 | 0.0288 (12) | 0.0191 (11) | 0.0239 (12) | 0.0041 (9) | −0.0013 (10) | −0.0012 (10) |
| C1 | 0.0253 (14) | 0.0225 (13) | 0.0196 (13) | 0.0059 (11) | 0.0001 (11) | −0.0002 (11) |
| C2 | 0.0214 (13) | 0.0185 (12) | 0.0153 (14) | 0.0003 (10) | 0.0037 (10) | −0.0018 (10) |
| C3 | 0.0249 (14) | 0.0187 (12) | 0.0224 (14) | 0.0045 (10) | 0.0001 (11) | −0.0023 (11) |
| C4 | 0.0273 (14) | 0.0250 (14) | 0.0221 (15) | 0.0067 (11) | 0.0008 (12) | −0.0008 (11) |
| C5 | 0.0266 (14) | 0.0251 (14) | 0.0163 (13) | 0.0001 (11) | −0.0001 (11) | −0.0051 (11) |
| C6 | 0.0317 (15) | 0.0164 (12) | 0.0197 (14) | 0.0010 (10) | 0.0045 (11) | −0.0024 (10) |
| C7 | 0.0242 (14) | 0.0186 (12) | 0.0148 (13) | 0.0031 (10) | 0.0022 (10) | −0.0004 (10) |
| C8 | 0.0205 (12) | 0.0176 (12) | 0.0167 (13) | −0.0013 (10) | 0.0019 (10) | −0.0030 (10) |
| C9 | 0.0210 (12) | 0.0180 (12) | 0.0163 (13) | 0.0017 (10) | −0.0011 (10) | 0.0007 (10) |
| C10 | 0.0188 (13) | 0.0264 (13) | 0.0152 (13) | −0.0015 (10) | 0.0036 (10) | −0.0033 (11) |
| C11 | 0.0268 (14) | 0.0341 (14) | 0.0180 (13) | −0.0007 (12) | 0.0016 (11) | 0.0008 (12) |
| C12 | 0.0255 (13) | 0.0250 (12) | 0.0273 (15) | −0.0010 (11) | 0.0071 (11) | −0.0092 (12) |
| C13 | 0.0167 (13) | 0.0394 (15) | 0.0255 (15) | −0.0004 (11) | 0.0031 (11) | −0.0029 (13) |
| O1—C9 | 1.203 (3) | C6—C7 | 1.399 (4) |
| O2—C9 | 1.336 (3) | C6—H6 | 0.9500 |
| O2—C10 | 1.490 (3) | C8—C9 | 1.520 (3) |
| N1—C1 | 1.363 (3) | C8—H8A | 0.9900 |
| N1—C2 | 1.384 (3) | C8—H8B | 0.9900 |
| N1—C8 | 1.451 (3) | C10—C11 | 1.516 (4) |
| N2—C1 | 1.317 (3) | C10—C13 | 1.516 (3) |
| N2—C7 | 1.394 (3) | C10—C12 | 1.520 (4) |
| C1—H1 | 0.9500 | C11—H11A | 0.9800 |
| C2—C3 | 1.388 (3) | C11—H11B | 0.9800 |
| C2—C7 | 1.402 (3) | C11—H11C | 0.9800 |
| C3—C4 | 1.383 (4) | C12—H12A | 0.9800 |
| C3—H3 | 0.9500 | C12—H12B | 0.9800 |
| C4—C5 | 1.406 (4) | C12—H12C | 0.9800 |
| C4—H4 | 0.9500 | C13—H13A | 0.9800 |
| C5—C6 | 1.382 (4) | C13—H13B | 0.9800 |
| C5—H5 | 0.9500 | C13—H13C | 0.9800 |
| C9—O2—C10 | 120.91 (18) | C9—C8—H8B | 109.4 |
| C1—N1—C2 | 106.6 (2) | H8A—C8—H8B | 108.0 |
| C1—N1—C8 | 126.3 (2) | O1—C9—O2 | 126.7 (2) |
| C2—N1—C8 | 125.84 (19) | O1—C9—C8 | 124.2 (2) |
| C1—N2—C7 | 104.24 (19) | O2—C9—C8 | 109.14 (18) |
| N2—C1—N1 | 113.8 (2) | O2—C10—C11 | 109.36 (19) |
| N2—C1—H1 | 123.1 | O2—C10—C13 | 110.1 (2) |
| N1—C1—H1 | 123.1 | C11—C10—C13 | 112.4 (2) |
| N1—C2—C3 | 131.6 (2) | O2—C10—C12 | 102.64 (19) |
| N1—C2—C7 | 105.1 (2) | C11—C10—C12 | 111.8 (2) |
| C3—C2—C7 | 123.3 (2) | C13—C10—C12 | 110.1 (2) |
| C4—C3—C2 | 116.1 (2) | C10—C11—H11A | 109.5 |
| C4—C3—H3 | 121.9 | C10—C11—H11B | 109.5 |
| C2—C3—H3 | 121.9 | H11A—C11—H11B | 109.5 |
| C3—C4—C5 | 122.0 (2) | C10—C11—H11C | 109.5 |
| C3—C4—H4 | 119.0 | H11A—C11—H11C | 109.5 |
| C5—C4—H4 | 119.0 | H11B—C11—H11C | 109.5 |
| C6—C5—C4 | 121.1 (2) | C10—C12—H12A | 109.5 |
| C6—C5—H5 | 119.5 | C10—C12—H12B | 109.5 |
| C4—C5—H5 | 119.5 | H12A—C12—H12B | 109.5 |
| C5—C6—C7 | 118.2 (2) | C10—C12—H12C | 109.5 |
| C5—C6—H6 | 120.9 | H12A—C12—H12C | 109.5 |
| C7—C6—H6 | 120.9 | H12B—C12—H12C | 109.5 |
| N2—C7—C6 | 130.4 (2) | C10—C13—H13A | 109.5 |
| N2—C7—C2 | 110.3 (2) | C10—C13—H13B | 109.5 |
| C6—C7—C2 | 119.4 (2) | H13A—C13—H13B | 109.5 |
| N1—C8—C9 | 111.03 (18) | C10—C13—H13C | 109.5 |
| N1—C8—H8A | 109.4 | H13A—C13—H13C | 109.5 |
| C9—C8—H8A | 109.4 | H13B—C13—H13C | 109.5 |
| N1—C8—H8B | 109.4 |
| H··· | ||||
| C11—H11 | 0.98 | 2.47 | 3.033 (3) | 116 |
| C13—H13 | 0.98 | 2.42 | 2.995 (3) | 117 |
| C3—H3···N2i | 0.95 | 2.48 | 3.406 (3) | 165 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3⋯N2i | 0.95 | 2.48 | 3.406 (3) | 165 |
Symmetry code: (i) .