Literature DB >> 22347056

tert-Butyl 2-(1H-imidazol-1-yl)acetate.

Nassir N Al-Mohammed1, Yatimah Alias, Zanariah Abdullah, Hamid Khaledi.   

Abstract

In the title compound, C(9)H(14)N(2)O(2), the imidazole ring and the acetate O-C=O plane make a dihedral angle of 80.54 (12)°. In the crystal, mol-ecules are connected via pairs of C-H⋯O hydrogen bonds, forming centrosymmetric dimers.

Entities:  

Year:  2012        PMID: 22347056      PMCID: PMC3275200          DOI: 10.1107/S1600536812001067

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Pak et al. (2003 ▶); Wang et al. (2010 ▶).

Experimental

Crystal data

C9H14N2O2 M = 182.22 Monoclinic, a = 10.558 (2) Å b = 9.287 (2) Å c = 11.047 (2) Å β = 117.157 (4)° V = 963.9 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.33 × 0.27 × 0.05 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.971, T max = 0.996 6535 measured reflections 2208 independent reflections 1688 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.097 S = 1.05 2208 reflections 121 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812001067/is5051sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812001067/is5051Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H14N2O2F(000) = 392
Mr = 182.22Dx = 1.256 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 771 reflections
a = 10.558 (2) Åθ = 3.0–29.0°
b = 9.287 (2) ŵ = 0.09 mm1
c = 11.047 (2) ÅT = 100 K
β = 117.157 (4)°Plate, colorless
V = 963.9 (4) Å30.33 × 0.27 × 0.05 mm
Z = 4
Bruker APEXII CCD diffractometer2208 independent reflections
Radiation source: fine-focus sealed tube1688 reflections with I > 2σ(I)
graphiteRint = 0.035
φ and ω scansθmax = 27.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→13
Tmin = 0.971, Tmax = 0.996k = −12→12
6535 measured reflectionsl = −14→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.097H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0352P)2 + 0.2973P] where P = (Fo2 + 2Fc2)/3
2208 reflections(Δ/σ)max < 0.001
121 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.58413 (11)0.82030 (11)0.21337 (11)0.0244 (3)
O20.42983 (10)0.63596 (10)0.11631 (10)0.0177 (2)
N11.01459 (13)0.74927 (14)0.30780 (13)0.0250 (3)
N20.79333 (12)0.67798 (12)0.17766 (12)0.0164 (3)
C10.91215 (15)0.66189 (16)0.29694 (15)0.0210 (3)
H10.92070.59490.36530.025*
C20.95672 (16)0.82623 (16)0.18788 (16)0.0231 (3)
H21.00550.89890.16500.028*
C30.82115 (15)0.78441 (15)0.10713 (15)0.0197 (3)
H30.75840.82110.01980.024*
C40.65738 (15)0.60761 (15)0.13621 (15)0.0188 (3)
H4A0.67200.51660.18760.023*
H4B0.61550.58350.03820.023*
C50.55466 (15)0.70313 (15)0.16122 (14)0.0169 (3)
C60.30955 (14)0.69930 (15)0.13399 (14)0.0178 (3)
C70.35240 (16)0.71586 (17)0.28396 (15)0.0228 (3)
H7A0.39160.62470.33080.034*
H7B0.26880.74200.29570.034*
H7C0.42450.79160.32250.034*
C80.26438 (16)0.84140 (16)0.05766 (16)0.0230 (3)
H8A0.33930.91330.10280.035*
H8B0.17610.87470.05720.035*
H8C0.24870.8278−0.03620.035*
C90.19439 (15)0.58562 (16)0.06881 (15)0.0230 (3)
H9A0.16880.5775−0.02810.034*
H9B0.11020.61340.07900.034*
H9C0.22990.49270.11350.034*
U11U22U33U12U13U23
O10.0231 (6)0.0202 (5)0.0320 (6)−0.0045 (4)0.0144 (5)−0.0086 (4)
O20.0141 (5)0.0182 (5)0.0222 (5)−0.0015 (4)0.0096 (4)−0.0035 (4)
N10.0185 (7)0.0306 (7)0.0238 (7)−0.0012 (5)0.0077 (6)−0.0052 (6)
N20.0143 (6)0.0174 (6)0.0177 (6)−0.0016 (5)0.0075 (5)−0.0027 (5)
C10.0195 (7)0.0230 (7)0.0192 (7)0.0036 (6)0.0076 (6)0.0006 (6)
C20.0199 (7)0.0233 (7)0.0290 (8)−0.0039 (6)0.0138 (7)−0.0026 (6)
C30.0213 (8)0.0209 (7)0.0191 (7)0.0001 (6)0.0111 (6)0.0010 (6)
C40.0159 (7)0.0177 (7)0.0241 (8)−0.0026 (5)0.0102 (6)−0.0037 (6)
C50.0163 (7)0.0188 (7)0.0148 (7)−0.0015 (5)0.0064 (6)0.0003 (5)
C60.0147 (7)0.0191 (7)0.0210 (7)0.0024 (5)0.0094 (6)−0.0002 (6)
C70.0218 (8)0.0268 (8)0.0216 (8)0.0020 (6)0.0116 (6)−0.0015 (6)
C80.0216 (8)0.0222 (7)0.0259 (8)0.0028 (6)0.0114 (7)0.0028 (6)
C90.0165 (8)0.0241 (7)0.0288 (8)−0.0011 (6)0.0107 (7)−0.0011 (6)
O1—C51.2039 (17)C4—H4B0.9900
O2—C51.3325 (16)C6—C71.513 (2)
O2—C61.4910 (16)C6—C91.5207 (19)
N1—C11.3131 (19)C6—C81.5209 (19)
N1—C21.379 (2)C7—H7A0.9800
N2—C11.3503 (18)C7—H7B0.9800
N2—C31.3709 (18)C7—H7C0.9800
N2—C41.4482 (17)C8—H8A0.9800
C1—H10.9500C8—H8B0.9800
C2—C31.353 (2)C8—H8C0.9800
C2—H20.9500C9—H9A0.9800
C3—H30.9500C9—H9B0.9800
C4—C51.5208 (19)C9—H9C0.9800
C4—H4A0.9900
C5—O2—C6121.56 (10)O2—C6—C9102.05 (11)
C1—N1—C2104.32 (12)C7—C6—C9111.34 (12)
C1—N2—C3106.85 (12)O2—C6—C8109.88 (11)
C1—N2—C4127.15 (12)C7—C6—C8112.35 (12)
C3—N2—C4125.75 (12)C9—C6—C8111.06 (12)
N1—C1—N2112.36 (13)C6—C7—H7A109.5
N1—C1—H1123.8C6—C7—H7B109.5
N2—C1—H1123.8H7A—C7—H7B109.5
C3—C2—N1110.88 (13)C6—C7—H7C109.5
C3—C2—H2124.6H7A—C7—H7C109.5
N1—C2—H2124.6H7B—C7—H7C109.5
C2—C3—N2105.60 (13)C6—C8—H8A109.5
C2—C3—H3127.2C6—C8—H8B109.5
N2—C3—H3127.2H8A—C8—H8B109.5
N2—C4—C5111.43 (11)C6—C8—H8C109.5
N2—C4—H4A109.3H8A—C8—H8C109.5
C5—C4—H4A109.3H8B—C8—H8C109.5
N2—C4—H4B109.3C6—C9—H9A109.5
C5—C4—H4B109.3C6—C9—H9B109.5
H4A—C4—H4B108.0H9A—C9—H9B109.5
O1—C5—O2126.65 (13)C6—C9—H9C109.5
O1—C5—C4124.35 (13)H9A—C9—H9C109.5
O2—C5—C4108.99 (11)H9B—C9—H9C109.5
O2—C6—C7109.68 (11)
D—H···AD—HH···AD···AD—H···A
C4—H4B···O2i0.992.563.3768 (18)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4B⋯O2i0.992.563.3768 (18)140

Symmetry code: (i) .

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3.  Ethyl 2-(2-methyl-4-nitro-1H-imidazol-1-yl)acetate.

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1.  tert-Butyl 2-(1H-benzimidazol-1-yl)acetate.

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