| Literature DB >> 22904950 |
Huai-Ling Guo1, Jia-Cheng Liu, Chao-Hu Xiao, Ting Pang, Ping Cao.
Abstract
The whole mol-ecule of the title compound, C(20)H(18)N(4)O(4), is generated by an inversion center. The benzimidazole ring mean plane make a dihedral angle of 89.4 (8)° with the plane passing through the acetate group (COO). In the crystal, mol-ecules are linked via weak C-H⋯O hydrogen bonds and π-π inter-actions [centroid-centroid distance = 3.743 (3) Å] involving inversion-related benzimidazole groups.Entities:
Year: 2012 PMID: 22904950 PMCID: PMC3414963 DOI: 10.1107/S1600536812032266
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H18N4O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 853 reflections | |
| θ = 2.6–23.8° | |
| µ = 0.10 mm−1 | |
| α = 67.191 (5)° | |
| β = 70.360 (5)° | Block, brown |
| γ = 87.172 (5)° | 0.33 × 0.31 × 0.29 mm |
| Bruker APEXII CCD diffractometer | 1600 independent reflections |
| Radiation source: fine-focus sealed tube | 1172 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.5°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 3034 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1600 reflections | (Δ/σ)max < 0.001 |
| 128 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.3492 (3) | 0.6658 (2) | 0.5117 (2) | 0.0382 (5) | |
| C2 | 0.5275 (3) | 0.7663 (3) | 0.4646 (3) | 0.0485 (6) | |
| H2 | 0.6033 | 0.8332 | 0.3460 | 0.058* | |
| C3 | 0.5865 (4) | 0.7619 (3) | 0.6022 (3) | 0.0539 (6) | |
| H3 | 0.7063 | 0.8271 | 0.5762 | 0.065* | |
| C4 | 0.4722 (4) | 0.6624 (3) | 0.7808 (3) | 0.0533 (6) | |
| H4 | 0.5173 | 0.6635 | 0.8704 | 0.064* | |
| C5 | 0.2955 (3) | 0.5636 (3) | 0.8265 (3) | 0.0497 (6) | |
| H5 | 0.2197 | 0.4979 | 0.9454 | 0.060* | |
| C6 | 0.2327 (3) | 0.5645 (2) | 0.6892 (2) | 0.0397 (5) | |
| C7 | 0.0742 (3) | 0.5291 (2) | 0.5281 (2) | 0.0385 (5) | |
| C8 | 0.3089 (3) | 0.7314 (2) | 0.2179 (2) | 0.0433 (5) | |
| H8A | 0.2674 | 0.6583 | 0.1696 | 0.052* | |
| H8B | 0.4585 | 0.7504 | 0.1691 | 0.052* | |
| C9 | 0.2220 (3) | 0.9010 (3) | 0.1547 (3) | 0.0435 (5) | |
| C10 | 0.0081 (4) | 1.1015 (3) | 0.2334 (4) | 0.0720 (8) | |
| H10A | 0.1162 | 1.1933 | 0.1612 | 0.108* | |
| H10B | −0.0752 | 1.1195 | 0.3382 | 0.108* | |
| H10C | −0.0764 | 1.0989 | 0.1659 | 0.108* | |
| N1 | 0.2463 (2) | 0.64117 (18) | 0.41008 (19) | 0.0388 (4) | |
| N2 | 0.0622 (3) | 0.4797 (2) | 0.6961 (2) | 0.0435 (5) | |
| O1 | 0.2651 (3) | 0.9897 (2) | −0.00051 (19) | 0.0731 (6) | |
| O2 | 0.0980 (2) | 0.94015 (17) | 0.28611 (18) | 0.0535 (5) |
| C1 | 0.0432 (12) | 0.0319 (10) | 0.0357 (10) | 0.0078 (9) | −0.0109 (9) | −0.0122 (8) |
| C2 | 0.0521 (14) | 0.0445 (12) | 0.0380 (11) | −0.0018 (10) | −0.0083 (10) | −0.0104 (9) |
| C3 | 0.0519 (14) | 0.0543 (13) | 0.0493 (13) | −0.0041 (11) | −0.0148 (11) | −0.0153 (11) |
| C4 | 0.0571 (15) | 0.0605 (14) | 0.0434 (12) | 0.0081 (12) | −0.0224 (11) | −0.0176 (11) |
| C5 | 0.0498 (14) | 0.0542 (13) | 0.0354 (11) | 0.0099 (11) | −0.0134 (10) | −0.0094 (9) |
| C6 | 0.0429 (13) | 0.0351 (10) | 0.0329 (10) | 0.0077 (9) | −0.0102 (9) | −0.0079 (8) |
| C7 | 0.0420 (12) | 0.0299 (10) | 0.0321 (10) | 0.0035 (9) | −0.0063 (8) | −0.0059 (8) |
| C8 | 0.0497 (13) | 0.0421 (11) | 0.0280 (10) | −0.0052 (10) | −0.0030 (9) | −0.0110 (8) |
| C9 | 0.0431 (13) | 0.0446 (12) | 0.0335 (10) | −0.0084 (9) | −0.0131 (9) | −0.0044 (9) |
| C10 | 0.082 (2) | 0.0443 (13) | 0.0862 (18) | 0.0167 (13) | −0.0383 (16) | −0.0158 (13) |
| N1 | 0.0442 (10) | 0.0304 (8) | 0.0302 (8) | 0.0015 (7) | −0.0059 (7) | −0.0058 (7) |
| N2 | 0.0454 (11) | 0.0396 (9) | 0.0321 (9) | 0.0036 (8) | −0.0079 (8) | −0.0049 (7) |
| O1 | 0.0739 (12) | 0.0779 (12) | 0.0375 (9) | 0.0000 (10) | −0.0172 (8) | 0.0073 (8) |
| O2 | 0.0684 (11) | 0.0384 (8) | 0.0470 (9) | 0.0120 (7) | −0.0185 (8) | −0.0119 (7) |
| C1—N1 | 1.377 (3) | C7—N1 | 1.379 (2) |
| C1—C2 | 1.381 (3) | C7—C7i | 1.449 (4) |
| C1—C6 | 1.398 (3) | C8—N1 | 1.448 (2) |
| C2—C3 | 1.368 (3) | C8—C9 | 1.503 (3) |
| C2—H2 | 0.9300 | C8—H8A | 0.9700 |
| C3—C4 | 1.398 (3) | C8—H8B | 0.9700 |
| C3—H3 | 0.9300 | C9—O1 | 1.194 (2) |
| C4—C5 | 1.367 (3) | C9—O2 | 1.321 (2) |
| C4—H4 | 0.9300 | C10—O2 | 1.447 (3) |
| C5—C6 | 1.391 (3) | C10—H10A | 0.9600 |
| C5—H5 | 0.9300 | C10—H10B | 0.9600 |
| C6—N2 | 1.383 (3) | C10—H10C | 0.9600 |
| C7—N2 | 1.320 (2) | ||
| N1—C1—C2 | 131.59 (18) | N1—C8—C9 | 115.16 (16) |
| N1—C1—C6 | 105.60 (18) | N1—C8—H8A | 108.5 |
| C2—C1—C6 | 122.81 (19) | C9—C8—H8A | 108.5 |
| C3—C2—C1 | 116.29 (19) | N1—C8—H8B | 108.5 |
| C3—C2—H2 | 121.9 | C9—C8—H8B | 108.5 |
| C1—C2—H2 | 121.9 | H8A—C8—H8B | 107.5 |
| C2—C3—C4 | 122.0 (2) | O1—C9—O2 | 124.6 (2) |
| C2—C3—H3 | 119.0 | O1—C9—C8 | 121.8 (2) |
| C4—C3—H3 | 119.0 | O2—C9—C8 | 113.58 (15) |
| C5—C4—C3 | 121.4 (2) | O2—C10—H10A | 109.5 |
| C5—C4—H4 | 119.3 | O2—C10—H10B | 109.5 |
| C3—C4—H4 | 119.3 | H10A—C10—H10B | 109.5 |
| C4—C5—C6 | 117.83 (19) | O2—C10—H10C | 109.5 |
| C4—C5—H5 | 121.1 | H10A—C10—H10C | 109.5 |
| C6—C5—H5 | 121.1 | H10B—C10—H10C | 109.5 |
| N2—C6—C5 | 130.18 (18) | C1—N1—C7 | 106.58 (15) |
| N2—C6—C1 | 110.13 (17) | C1—N1—C8 | 123.60 (16) |
| C5—C6—C1 | 119.7 (2) | C7—N1—C8 | 129.65 (17) |
| N2—C7—N1 | 112.52 (18) | C7—N2—C6 | 105.16 (16) |
| N2—C7—C7i | 124.2 (2) | C9—O2—C10 | 116.11 (17) |
| N1—C7—C7i | 123.3 (2) | ||
| N1—C1—C2—C3 | 179.33 (19) | C2—C1—N1—C8 | −3.2 (3) |
| C6—C1—C2—C3 | 0.1 (3) | C6—C1—N1—C8 | 176.12 (16) |
| C1—C2—C3—C4 | −0.5 (3) | N2—C7—N1—C1 | −0.7 (2) |
| C2—C3—C4—C5 | 0.3 (3) | C7i—C7—N1—C1 | −179.9 (2) |
| C3—C4—C5—C6 | 0.2 (3) | N2—C7—N1—C8 | −176.09 (18) |
| C4—C5—C6—N2 | −179.3 (2) | C7i—C7—N1—C8 | 4.8 (3) |
| C4—C5—C6—C1 | −0.5 (3) | C9—C8—N1—C1 | −87.6 (2) |
| N1—C1—C6—N2 | 0.0 (2) | C9—C8—N1—C7 | 87.1 (2) |
| C2—C1—C6—N2 | 179.38 (19) | N1—C7—N2—C6 | 0.7 (2) |
| N1—C1—C6—C5 | −179.02 (17) | C7i—C7—N2—C6 | 179.9 (2) |
| C2—C1—C6—C5 | 0.4 (3) | C5—C6—N2—C7 | 178.5 (2) |
| N1—C8—C9—O1 | 178.39 (19) | C1—C6—N2—C7 | −0.4 (2) |
| N1—C8—C9—O2 | −1.1 (3) | O1—C9—O2—C10 | 1.1 (3) |
| C2—C1—N1—C7 | −178.9 (2) | C8—C9—O2—C10 | −179.49 (17) |
| C6—C1—N1—C7 | 0.42 (19) |
| H··· | ||||
| C8—H8 | 0.97 | 2.59 | 3.364 (3) | 137 |
| C10—H10 | 0.96 | 2.55 | 3.481 (4) | 164 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C8—H8 | 0.97 | 2.59 | 3.364 (3) | 137 |
| C10—H10 | 0.96 | 2.55 | 3.481 (4) | 164 |
Symmetry codes: (i) ; (ii) .