Literature DB >> 22374957

Genome sequence of Streptomyces sp. strain TOR3209, a rhizosphere microecology regulator isolated from tomato rhizosphere.

Dong Hu1, Xiaozhi Li, Yueli Chang, Huan He, Cuimian Zhang, Nan Jia, Hongtao Li, Zhanwu Wang.   

Abstract

Streptomyces sp. strain TOR3209, isolated from tomato rhizosphere, can regulate the rhizosphere microecology of a variety of crops. Strain TOR3209 could improve plant systemic resistance and promote plant growth. Here, the genome sequence of strain TOR3209 is reported, providing the molecular biological basis of the regulation mechanism of rhizosphere microecology.

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Year:  2012        PMID： 22374957      PMCID： PMC3294855          DOI： 10.1128/JB.06684-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

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Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

2.  De novo assembly of human genomes with massively parallel short read sequencing.

Authors:  Ruiqiang Li; Hongmei Zhu; Jue Ruan; Wubin Qian; Xiaodong Fang; Zhongbin Shi; Yingrui Li; Shengting Li; Gao Shan; Karsten Kristiansen; Songgang Li; Huanming Yang; Jian Wang; Jun Wang
Journal:  Genome Res       Date:  2009-12-17       Impact factor: 9.043

3.  Draft genome sequence of the marine Streptomyces sp. strain PP-C42, isolated from the Baltic Sea.

Authors:  Longjiang Fan; Yun Liu; Zefeng Li; Heike I Baumann; Katrin Kleinschmidt; Wanzhi Ye; Johannes F Imhoff; Michael Kleine; Daguang Cai
Journal:  J Bacteriol       Date:  2011-05-13       Impact factor: 3.490

4.  Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).

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Journal:  Nature       Date:  2002-05-09       Impact factor: 49.962

5.  Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites.

Authors:  S Omura; H Ikeda; J Ishikawa; A Hanamoto; C Takahashi; M Shinose; Y Takahashi; H Horikawa; H Nakazawa; T Osonoe; H Kikuchi; T Shiba; Y Sakaki; M Hattori
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

6.  Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.

Authors:  Yasuo Ohnishi; Jun Ishikawa; Hirofumi Hara; Hirokazu Suzuki; Miwa Ikenoya; Haruo Ikeda; Atsushi Yamashita; Masahira Hattori; Sueharu Horinouchi
Journal:  J Bacteriol       Date:  2008-03-28       Impact factor: 3.490

7.  The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.

Authors:  Peter Schattner; Angela N Brooks; Todd M Lowe
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

8.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

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Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

9.  Accurate whole human genome sequencing using reversible terminator chemistry.

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Journal:  Nature       Date:  2008-11-06       Impact factor: 49.962
  9 in total
  6 in total

1.  Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides.

Authors:  Steven D Brown; Sagar M Utturkar; Dawn M Klingeman; Courtney M Johnson; Stanton L Martin; Miriam L Land; Tse-Yuan S Lu; Christopher W Schadt; Mitchel J Doktycz; Dale A Pelletier
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

2.  Genomic Organization of Streptomyces flavotricini NGL1 and Streptomyces erythrochromogenes HMS4 Reveals Differential Plant Beneficial Attributes and Laccase Production Capabilities.

Authors:  Richa Salwan; Randhir Kaur; Vivek Sharma
Journal:  Mol Biotechnol       Date:  2021-11-16       Impact factor: 2.695

3.  Volatile Organic Compounds of Streptomyces sp. TOR3209 Stimulated Tobacco Growth by Up-Regulating the Expression of Genes Related to Plant Growth and Development.

Authors:  Yuxi He; Wenyu Guo; Jieli Peng; Jinying Guo; Jia Ma; Xu Wang; Cuimian Zhang; Nan Jia; Entao Wang; Dong Hu; Zhanwu Wang
Journal:  Front Microbiol       Date:  2022-05-20       Impact factor: 6.064

4.  Regulation of antimycin biosynthesis by the orphan ECF RNA polymerase sigma factor σ (AntA.).

Authors:  Ryan F Seipke; Elaine Patrick; Matthew I Hutchings
Journal:  PeerJ       Date:  2014-02-06       Impact factor: 2.984

Review 5.  The regulation and biosynthesis of antimycins.

Authors:  Ryan F Seipke; Matthew I Hutchings
Journal:  Beilstein J Org Chem       Date:  2013-11-19       Impact factor: 2.883

6.  Streptomyces sp. strain TOR3209: a rhizosphere bacterium promoting growth of tomato by affecting the rhizosphere microbial community.

Authors:  Dong Hu; Shuhong Li; Ying Li; Jieli Peng; Xiaoyan Wei; Jia Ma; Cuimian Zhang; Nan Jia; Entao Wang; Zhanwu Wang
Journal:  Sci Rep       Date:  2020-11-18       Impact factor: 4.379
  6 in total

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