Literature DB >> 22285574

Chromatin dynamics in DNA double-strand break repair.

Lei Shi1, Philipp Oberdoerffer.   

Abstract

DNA double-strand breaks (DSBs) occur in the context of a highly organized chromatin environment and are, thus, a significant threat to the epigenomic integrity of eukaryotic cells. Changes in break-proximal chromatin structure are thought to be a prerequisite for efficient DNA repair and may help protect the structural integrity of the nucleus. Unlike most bona fide DNA repair factors, chromatin influences the repair process at several levels: the existing chromatin context at the site of damage directly affects the access and kinetics of the repair machinery; DSB induced chromatin modifications influence the choice of repair factors, thereby modulating repair outcome; lastly, DNA damage can have a significant impact on chromatin beyond the site of damage. We will discuss recent findings that highlight both the complexity and importance of dynamic and tightly orchestrated chromatin reorganization to ensure efficient DSB repair and nuclear integrity. This article is part of a Special Issue entitled: Chromatin in time and space. Published by Elsevier B.V.

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Year:  2012        PMID: 22285574      PMCID: PMC3368990          DOI: 10.1016/j.bbagrm.2012.01.002

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  109 in total

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2.  Positional stability of single double-strand breaks in mammalian cells.

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3.  MEC1-dependent redistribution of the Sir3 silencing protein from telomeres to DNA double-strand breaks.

Authors:  K D Mills; D A Sinclair; L Guarente
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4.  Double-strand breaks in heterochromatin move outside of a dynamic HP1a domain to complete recombinational repair.

Authors:  Irene Chiolo; Aki Minoda; Serafin U Colmenares; Aris Polyzos; Sylvain V Costes; Gary H Karpen
Journal:  Cell       Date:  2011-02-25       Impact factor: 41.582

5.  The sirtuin SIRT6 deacetylates H3 K56Ac in vivo to promote genomic stability.

Authors:  Bo Yang; Bernadette M M Zwaans; Mark Eckersdorff; David B Lombard
Journal:  Cell Cycle       Date:  2009-08-22       Impact factor: 4.534

6.  Cell cycle-dependent deacetylation of telomeric histone H3 lysine K56 by human SIRT6.

Authors:  Eriko Michishita; Ronald A McCord; Lisa D Boxer; Matthew F Barber; Tao Hong; Or Gozani; Katrin F Chua
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Review 7.  The role of nuclear architecture in genomic instability and ageing.

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8.  Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence.

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Review 9.  Chromosome fragile sites.

Authors:  Sandra G Durkin; Thomas W Glover
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  30 in total

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2.  Histone demethylase KDM5B is a key regulator of genome stability.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

Review 3.  Antigenic variation and the generation of diversity in malaria parasites.

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4.  Induction of recombination between diverged sequences in a mammalian genome by a double-strand break.

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6.  The emerging role of lysine demethylases in DNA damage response: dissecting the recruitment mode of KDM4D/JMJD2D to DNA damage sites.

Authors:  Hanan Khoury-Haddad; Prathamesh T Nadar-Ponniah; Samah Awwad; Nabieh Ayoub
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

Review 7.  DNA damage, chromatin, and transcription: the trinity of aging.

Authors:  Rebecca C Burgess; Tom Misteli; Philipp Oberdoerffer
Journal:  Curr Opin Cell Biol       Date:  2012-08-17       Impact factor: 8.382

8.  HIM-17 regulates the position of recombination events and GSP-1/2 localization to establish short arm identity on bivalents in meiosis.

Authors:  Saravanapriah Nadarajan; Elisabeth Altendorfer; Takamune T Saito; Marina Martinez-Garcia; Monica P Colaiácovo
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-27       Impact factor: 11.205

Review 9.  RNA splicing: a new player in the DNA damage response.

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10.  Drosophila MOF controls Checkpoint protein2 and regulates genomic stability during early embryogenesis.

Authors:  Sreerangam N C V L Pushpavalli; Arpita Sarkar; M Janaki Ramaiah; Debabani Roy Chowdhury; Utpal Bhadra; Manika Pal-Bhadra
Journal:  BMC Mol Biol       Date:  2013-01-24       Impact factor: 2.946

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