Literature DB >> 22247530

Complete genome sequence of Leuconostoc mesenteroides subsp. mesenteroides strain J18, isolated from kimchi.

Ji Young Jung1, Seung Hyeon Lee, Se Hee Lee, Che Ok Jeon.   

Abstract

Leuconostoc mesenteroides subsp. mesenteroides is one of the most predominant lactic acid bacterial groups during kimchi fermentation. Here, we report the complete genome sequence of L. mesenteroides subsp. mesenteroides J18, which was isolated from kimchi. The genome of the strain consists of a 1,896,561-bp chromosome and five plasmids.

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Mesh：

Year:  2012        PMID： 22247530      PMCID： PMC3264068          DOI： 10.1128/JB.06498-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Complete genome sequence of Leuconostoc kimchii strain C2, isolated from Kimchi.

Authors:  Seung Hyeon Lee; Ji Young Jung; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

2.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Leuconostoc miyukkimchii sp. nov., isolated from brown algae (Undaria pinnatifida) kimchi.

Authors:  Seung Hyeon Lee; Moon Su Park; Ji Young Jung; Che Ok Jeon
Journal:  Int J Syst Evol Microbiol       Date:  2011-06-24       Impact factor: 2.747

Review 7.  Biochemical, microbiological, and nutritional aspects of kimchi (Korean fermented vegetable products).

Authors:  H S Cheigh; K Y Park
Journal:  Crit Rev Food Sci Nutr       Date:  1994       Impact factor: 11.176

8.  Metagenomic analysis of kimchi, a traditional Korean fermented food.

Authors:  Ji Young Jung; Se Hee Lee; Jeong Myeong Kim; Moon Su Park; Jin-Woo Bae; Yoonsoo Hahn; Eugene L Madsen; Che Ok Jeon
Journal:  Appl Environ Microbiol       Date:  2011-02-11       Impact factor: 4.792

9.  Selection of psychrotrophic Leuconostoc spp. producing highly active dextransucrase from lactate fermented vegetables.

Authors:  Hyun-Ju Eom; Dong Mi Seo; Nam Soo Han
Journal:  Int J Food Microbiol       Date:  2007-03-31       Impact factor: 5.277

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  10 in total
  10 in total

1.  Genome sequence analysis of potential probiotic strain Leuconostoc lactis EFEL005 isolated from kimchi.

Authors:  Jin Seok Moon; Hye Sun Choi; So Yeon Shin; Sol Ji Noh; Che Ok Jeon; Nam Soo Han
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

2.  Characterization of a Cryptic Rolling-Circle Replication Plasmid pMK8 from Enterococcus durans 1-8.

Authors:  Penyu Zhou; Zhengyuan Zhai; Xiong Yao; Peihua Ma; Yanling Hao
Journal:  Curr Microbiol       Date:  2018-05-17       Impact factor: 2.188

3.  Complete genome sequence of Leuconostoc gelidum strain JB7, isolated from kimchi.

Authors:  Ji Young Jung; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

4.  Complete genome sequence of Leuconostoc carnosum strain JB16, isolated from kimchi.

Authors:  Ji Young Jung; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

5.  Draft Genome Sequence of Three Antibiotic-Resistant Leuconostoc mesenteroides Strains of Dairy Origin.

Authors:  Ilenia Campedelli; Ana Belén Flórez; Elisa Salvetti; Susana Delgado; Luigi Orrù; Luigi Cattivelli; Ángel Alegría; Giovanna E Felis; Sandra Torriani; Baltasar Mayo
Journal:  Genome Announc       Date:  2015-09-10

6.  Draft Genome Sequence of Leuconostoc mesenteroides P45 Isolated from Pulque, a Traditional Mexican Alcoholic Fermented Beverage.

Authors:  Fernando Riveros-Mckay; Itzia Campos; Martha Giles-Gómez; Francisco Bolívar; Adelfo Escalante
Journal:  Genome Announc       Date:  2014-11-06

Review 7.  Kimchi and Other Widely Consumed Traditional Fermented Foods of Korea: A Review.

Authors:  Jayanta Kumar Patra; Gitishree Das; Spiros Paramithiotis; Han-Seung Shin
Journal:  Front Microbiol       Date:  2016-09-28       Impact factor: 5.640

8.  Genomic Characterization of Dairy Associated Leuconostoc Species and Diversity of Leuconostocs in Undefined Mixed Mesophilic Starter Cultures.

Authors:  Cyril A Frantzen; Witold Kot; Thomas B Pedersen; Ylva M Ardö; Jeff R Broadbent; Horst Neve; Lars H Hansen; Fabio Dal Bello; Hilde M Østlie; Hans P Kleppen; Finn K Vogensen; Helge Holo
Journal:  Front Microbiol       Date:  2017-02-03       Impact factor: 5.640

9.  Whole-Genome Sequence of Leuconostoc mesenteroides LT-38, a Non-Spore-Forming Gram-Positive Lactic Acid Bacterium.

Authors:  Shiro Kato; Tadao Oikawa
Journal:  Genome Announc       Date:  2017-08-03

10.  Identification of 2-hydroxyisocaproic acid production in lactic acid bacteria and evaluation of microbial dynamics during kimchi ripening.

Authors:  Boyeon Park; Hyelyeon Hwang; Ji Yoon Chang; Sung Wook Hong; Se Hee Lee; Min Young Jung; Sung-Oh Sohn; Hae Woong Park; Jong-Hee Lee
Journal:  Sci Rep       Date:  2017-09-07       Impact factor: 4.379
  10 in total

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