Literature DB >> 23144413

Complete genome sequence of Leuconostoc carnosum strain JB16, isolated from kimchi.

Ji Young Jung1, Se Hee Lee, Che Ok Jeon.   

Abstract

Leuconostoc carnosum strain JB16 was isolated from kimchi, the traditional Korean fermented food. Here, we report the complete genome sequence of L. carnosum strain JB16, consisting of a 1,645,096-bp circular chromosome with a G+C content of 37.24% and four plasmids.

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Year:  2012        PMID： 23144413      PMCID： PMC3497485          DOI： 10.1128/JB.01805-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

1.  Complete genome sequence of Leuconostoc kimchii strain C2, isolated from Kimchi.

Authors:  Seung Hyeon Lee; Ji Young Jung; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

2.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Complete genome sequence of Leuconostoc mesenteroides subsp. mesenteroides strain J18, isolated from kimchi.

Authors:  Ji Young Jung; Seung Hyeon Lee; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2012-02       Impact factor: 3.490

7.  Effects of Leuconostoc mesenteroides starter cultures on microbial communities and metabolites during kimchi fermentation.

Authors:  Ji Young Jung; Se Hee Lee; Hyo Jung Lee; Hye-Young Seo; Wan-Soo Park; Che Ok Jeon
Journal:  Int J Food Microbiol       Date:  2011-12-04       Impact factor: 5.277

8.  Metagenomic analysis of kimchi, a traditional Korean fermented food.

Authors:  Ji Young Jung; Se Hee Lee; Jeong Myeong Kim; Moon Su Park; Jin-Woo Bae; Yoonsoo Hahn; Eugene L Madsen; Che Ok Jeon
Journal:  Appl Environ Microbiol       Date:  2011-02-11       Impact factor: 4.792

9.  Microbial population dynamics of kimchi, a fermented cabbage product.

Authors:  Jinhee Cho; Dongyun Lee; Changnam Yang; Jongin Jeon; Jeongho Kim; Hongui Han
Journal:  FEMS Microbiol Lett       Date:  2006-04       Impact factor: 2.742

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  10 in total
  7 in total

1.  Genome sequence analysis of potential probiotic strain Leuconostoc lactis EFEL005 isolated from kimchi.

Authors:  Jin Seok Moon; Hye Sun Choi; So Yeon Shin; Sol Ji Noh; Che Ok Jeon; Nam Soo Han
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

2.  Draft Genome Sequence of Leuconostoc mesenteroides P45 Isolated from Pulque, a Traditional Mexican Alcoholic Fermented Beverage.

Authors:  Fernando Riveros-Mckay; Itzia Campos; Martha Giles-Gómez; Francisco Bolívar; Adelfo Escalante
Journal:  Genome Announc       Date:  2014-11-06

Review 3.  Functional genomics of lactic acid bacteria: from food to health.

Authors:  François P Douillard; Willem M de Vos
Journal:  Microb Cell Fact       Date:  2014-08-29       Impact factor: 5.328

4.  Antibiotic Susceptibility Profiles of Dairy Leuconostoc, Analysis of the Genetic Basis of Atypical Resistances and Transfer of Genes In Vitro and in a Food Matrix.

Authors:  Ana Belén Flórez; Ilenia Campedelli; Susana Delgado; Ángel Alegría; Elisa Salvetti; Giovanna E Felis; Baltasar Mayo; Sandra Torriani
Journal:  PLoS One       Date:  2016-01-04       Impact factor: 3.240

5.  Comparative genome analysis of Lactobacillus mudanjiangensis, an understudied member of the Lactobacillus plantarum group.

Authors:  Sander Wuyts; Camille Nina Allonsius; Stijn Wittouck; Sofie Thys; Bart Lievens; Stefan Weckx; Luc De Vuyst; Lebeer Sarah
Journal:  Microb Genom       Date:  2019-08-01

6.  Comparative Genomics of Leuconostoc carnosum.

Authors:  Francesco Candeliere; Stefano Raimondi; Gloria Spampinato; Moon Yue Feng Tay; Alberto Amaretti; Joergen Schlundt; Maddalena Rossi
Journal:  Front Microbiol       Date:  2021-01-11       Impact factor: 5.640

7.  ODFM, an omics data resource from microorganisms associated with fermented foods.

Authors:  Tae Woong Whon; Seung Woo Ahn; Sungjin Yang; Joon Yong Kim; Yeon Bee Kim; Yujin Kim; Ji-Man Hong; Hojin Jung; Yoon-E Choi; Se Hee Lee; Seong Woon Roh
Journal:  Sci Data       Date:  2021-04-20       Impact factor: 6.444
  7 in total

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