Literature DB >> 23144409

Complete genome sequence of Leuconostoc gelidum strain JB7, isolated from kimchi.

Ji Young Jung1, Se Hee Lee, Che Ok Jeon.   

Abstract

A strain of Leuconostoc gelidum, designated strain JB7, was isolated from kimchi, the representative Korean traditional fermented food. Here we announce the complete genome sequence of L. gelidum strain JB7, consisting of a 1,893,499-bp circular chromosome with a G+C content of 36.68%, and provide a description of its annotation.

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Year:  2012        PMID: 23144409      PMCID: PMC3497507          DOI: 10.1128/JB.01806-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  10 in total

1.  Complete genome sequence of Leuconostoc kimchii strain C2, isolated from Kimchi.

Authors:  Seung Hyeon Lee; Ji Young Jung; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

2.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Complete genome sequence of Leuconostoc mesenteroides subsp. mesenteroides strain J18, isolated from kimchi.

Authors:  Ji Young Jung; Seung Hyeon Lee; Se Hee Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2012-02       Impact factor: 3.490

7.  Effects of Leuconostoc mesenteroides starter cultures on microbial communities and metabolites during kimchi fermentation.

Authors:  Ji Young Jung; Se Hee Lee; Hyo Jung Lee; Hye-Young Seo; Wan-Soo Park; Che Ok Jeon
Journal:  Int J Food Microbiol       Date:  2011-12-04       Impact factor: 5.277

8.  Complete genome sequence of Weissella koreensis KACC 15510, isolated from kimchi.

Authors:  Se Hee Lee; Ji Young Jung; Seung Hyeon Lee; Che Ok Jeon
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

9.  Metagenomic analysis of kimchi, a traditional Korean fermented food.

Authors:  Ji Young Jung; Se Hee Lee; Jeong Myeong Kim; Moon Su Park; Jin-Woo Bae; Yoonsoo Hahn; Eugene L Madsen; Che Ok Jeon
Journal:  Appl Environ Microbiol       Date:  2011-02-11       Impact factor: 4.792

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

  10 in total
  5 in total

1.  Genome sequence analysis of potential probiotic strain Leuconostoc lactis EFEL005 isolated from kimchi.

Authors:  Jin Seok Moon; Hye Sun Choi; So Yeon Shin; Sol Ji Noh; Che Ok Jeon; Nam Soo Han
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

2.  Genome Sequence and Transcriptome Analysis of Meat-Spoilage-Associated Lactic Acid Bacterium Lactococcus piscium MKFS47.

Authors:  Margarita Andreevskaya; Per Johansson; Pia Laine; Olli-Pekka Smolander; Matti Sonck; Riitta Rahkila; Elina Jääskeläinen; Lars Paulin; Petri Auvinen; Johanna Björkroth
Journal:  Appl Environ Microbiol       Date:  2015-03-27       Impact factor: 4.792

Review 3.  Functional genomics of lactic acid bacteria: from food to health.

Authors:  François P Douillard; Willem M de Vos
Journal:  Microb Cell Fact       Date:  2014-08-29       Impact factor: 5.328

4.  Complete genome sequence of Leuconostoc gelidum subsp. gasicomitatum KG16-1, isolated from vacuum-packaged vegetable sausages.

Authors:  Margarita Andreevskaya; Jenni Hultman; Per Johansson; Pia Laine; Lars Paulin; Petri Auvinen; Johanna Björkroth
Journal:  Stand Genomic Sci       Date:  2016-06-07

5.  ODFM, an omics data resource from microorganisms associated with fermented foods.

Authors:  Tae Woong Whon; Seung Woo Ahn; Sungjin Yang; Joon Yong Kim; Yeon Bee Kim; Yujin Kim; Ji-Man Hong; Hojin Jung; Yoon-E Choi; Se Hee Lee; Seong Woon Roh
Journal:  Sci Data       Date:  2021-04-20       Impact factor: 6.444

  5 in total

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