Literature DB >> 22143755

Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Christopher J Shoemaker1, Rachel Green.   

Abstract

Although well defined in bacterial systems, the molecular mechanisms underlying ribosome recycling in eukaryotic cells have only begun to be explored. Recent studies have proposed a direct role for eukaryotic termination factors eRF1 and eRF3 (and the related factors Dom34 and Hbs1) in downstream recycling processes; however, our understanding of the connection between termination and recycling in eukaryotes is limited. Here, using an in vitro reconstituted yeast translation system, we identify a key role for the multifunctional ABC-family protein Rli1 in stimulating both eRF1-mediated termination and ribosome recycling in yeast. Through subsequent kinetic analysis, we uncover a network of regulatory features that provides mechanistic insight into how the events of termination and recycling are obligately ordered. These results establish a model in which eukaryotic termination and recycling are not clearly demarcated events, as they are in bacteria, but coupled stages of the same release-factor mediated process.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22143755      PMCID: PMC3251084          DOI: 10.1073/pnas.1113956108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  50 in total

1.  X-ray structure of RLI, an essential twin cassette ABC ATPase involved in ribosome biogenesis and HIV capsid assembly.

Authors:  Annette Karcher; Katharina Büttner; Birgit Märtens; Ralf-Peter Jansen; Karl-Peter Hopfner
Journal:  Structure       Date:  2005-04       Impact factor: 5.006

2.  Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.

Authors:  Thomas Becker; Jean-Paul Armache; Alexander Jarasch; Andreas M Anger; Elizabeth Villa; Heidemarie Sieber; Basma Abdel Motaal; Thorsten Mielke; Otto Berninghausen; Roland Beckmann
Journal:  Nat Struct Mol Biol       Date:  2011-05-29       Impact factor: 15.369

3.  Release factor RF3 in E.coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP-dependent manner.

Authors:  D V Freistroffer; M Y Pavlov; J MacDougall; R H Buckingham; M Ehrenberg
Journal:  EMBO J       Date:  1997-07-01       Impact factor: 11.598

4.  Biogenesis of cytosolic ribosomes requires the essential iron-sulphur protein Rli1p and mitochondria.

Authors:  Gyula Kispal; Katalin Sipos; Heike Lange; Zsuzsanna Fekete; Tibor Bedekovics; Tamás Janáky; Jochen Bassler; Daili J Aguilar Netz; Janneke Balk; Carmen Rotte; Roland Lill
Journal:  EMBO J       Date:  2005-01-20       Impact factor: 11.598

5.  Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.

Authors:  L Y Frolova; R Y Tsivkovskii; G F Sivolobova; N Y Oparina; O I Serpinsky; V M Blinov; S I Tatkov; L L Kisselev
Journal:  RNA       Date:  1999-08       Impact factor: 4.942

6.  Identification of a host protein essential for assembly of immature HIV-1 capsids.

Authors:  Concepcion Zimmerman; Kevin C Klein; Patti K Kiser; Aalok R Singh; Bonnie L Firestein; Shannyn C Riba; Jaisri R Lingappa
Journal:  Nature       Date:  2002-01-03       Impact factor: 49.962

Review 7.  Recognition and selection of tRNA in translation.

Authors:  Marina V Rodnina; Kirill B Gromadski; Ute Kothe; Hans-Joachim Wieden
Journal:  FEBS Lett       Date:  2005-02-07       Impact factor: 4.124

8.  The crystal structure of human eukaryotic release factor eRF1--mechanism of stop codon recognition and peptidyl-tRNA hydrolysis.

Authors:  H Song; P Mugnier; A K Das; H M Webb; D R Evans; M F Tuite; B A Hemmings; D Barford
Journal:  Cell       Date:  2000-02-04       Impact factor: 41.582

9.  Novel G-protein complex whose requirement is linked to the translational status of the cell.

Authors:  Anne Carr-Schmid; Christine Pfund; Elizabeth A Craig; Terri Goss Kinzy
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

10.  Poly(A)-binding protein acts in translation termination via eukaryotic release factor 3 interaction and does not influence [PSI(+)] propagation.

Authors:  Bertrand Cosson; Anne Couturier; Svetlana Chabelskaya; Denis Kiktev; Sergey Inge-Vechtomov; Michel Philippe; Galina Zhouravleva
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

View more
  140 in total

1.  Translation drives mRNA quality control.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.

Authors:  Bethany S Strunk; Megan N Novak; Crystal L Young; Katrin Karbstein
Journal:  Cell       Date:  2012-07-06       Impact factor: 41.582

3.  HflX is a ribosome-splitting factor rescuing stalled ribosomes under stress conditions.

Authors:  Yanqing Zhang; Chandra Sekhar Mandava; Wei Cao; Xiaojing Li; Dejiu Zhang; Ningning Li; Yixiao Zhang; Xiaoxiao Zhang; Yan Qin; Kaixia Mi; Jianlin Lei; Suparna Sanyal; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2015-10-12       Impact factor: 15.369

4.  Release factor eRF3 mediates premature translation termination on polylysine-stalled ribosomes in Saccharomyces cerevisiae.

Authors:  Marco Chiabudini; Arlette Tais; Ying Zhang; Sachiko Hayashi; Tina Wölfle; Edith Fitzke; Sabine Rospert
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

Review 5.  Nonsense-mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome.

Authors:  Aparna Kishor; Sarah E Fritz; J Robert Hogg
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-05-26       Impact factor: 9.957

6.  Rli1/ABCE1 Recycles Terminating Ribosomes and Controls Translation Reinitiation in 3'UTRs In Vivo.

Authors:  David J Young; Nicholas R Guydosh; Fan Zhang; Alan G Hinnebusch; Rachel Green
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

Review 7.  Toward a Kinetic Understanding of Eukaryotic Translation.

Authors:  Masaaki Sokabe; Christopher S Fraser
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

8.  Dom34 rescues ribosomes in 3' untranslated regions.

Authors:  Nicholas R Guydosh; Rachel Green
Journal:  Cell       Date:  2014-02-27       Impact factor: 41.582

9.  Cryo-EM structure of the mammalian eukaryotic release factor eRF1-eRF3-associated termination complex.

Authors:  Derek Taylor; Anett Unbehaun; Wen Li; Sanchaita Das; Jianlin Lei; Hstau Y Liao; Robert A Grassucci; Tatyana V Pestova; Joachim Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

Review 10.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.