Literature DB >> 15680978

Recognition and selection of tRNA in translation.

Marina V Rodnina1, Kirill B Gromadski, Ute Kothe, Hans-Joachim Wieden.   

Abstract

Aminoacyl-tRNA (aa-tRNA) is delivered to the ribosome in a ternary complex with elongation factor Tu (EF-Tu) and GTP. The stepwise movement of aa-tRNA from EF-Tu into the ribosomal A site entails a number of intermediates. The ribosome recognizes aa-tRNA through shape discrimination of the codon-anticodon duplex and regulates the rates of GTP hydrolysis by EF-Tu and aa-tRNA accommodation in the A site by an induced fit mechanism. Recent results of kinetic measurements, ribosome crystallography, single molecule FRET measurements, and cryo-electron microscopy suggest the mechanism of tRNA recognition and selection.

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Year:  2005        PMID： 15680978     DOI： 10.1016/j.febslet.2004.11.048

Source DB:  PubMed          Journal:  FEBS Lett        ISSN： 0014-5793            Impact factor:   4.124


  74 in total

1.  Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  A new understanding of the decoding principle on the ribosome.

Authors:  Natalia Demeshkina; Lasse Jenner; Eric Westhof; Marat Yusupov; Gulnara Yusupova
Journal:  Nature       Date:  2012-03-21       Impact factor: 49.962

3.  Kinetic basis for global loss of fidelity arising from mismatches in the P-site codon:anticodon helix.

Authors:  Hani S Zaher; Rachel Green
Journal:  RNA       Date:  2010-08-19       Impact factor: 4.942

4.  Missense suppressor mutations in 16S rRNA reveal the importance of helices h8 and h14 in aminoacyl-tRNA selection.

Authors:  Sean P McClory; Joshua M Leisring; Daoming Qin; Kurt Fredrick
Journal:  RNA       Date:  2010-08-10       Impact factor: 4.942

5.  Structural rearrangements of the ribosome at the tRNA proofreading step.

Authors:  Lasse Jenner; Natalia Demeshkina; Gulnara Yusupova; Marat Yusupov
Journal:  Nat Struct Mol Biol       Date:  2010-08-08       Impact factor: 15.369

6.  Conformational sampling of aminoacyl-tRNA during selection on the bacterial ribosome.

Authors:  Peter Geggier; Richa Dave; Michael B Feldman; Daniel S Terry; Roger B Altman; James B Munro; Scott C Blanchard
Journal:  J Mol Biol       Date:  2010-04-29       Impact factor: 5.469

7.  Distortion of tRNA upon near-cognate codon recognition on the ribosome.

Authors:  Joerg Mittelstaet; Andrey L Konevega; Marina V Rodnina
Journal:  J Biol Chem       Date:  2011-01-06       Impact factor: 5.157

8.  Correlation between mechanical strength of messenger RNA pseudoknots and ribosomal frameshifting.

Authors:  Thomas M Hansen; S Nader S Reihani; Lene B Oddershede; Michael A Sørensen
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-27       Impact factor: 11.205

Review 9.  Fidelity at the molecular level: lessons from protein synthesis.

Authors:  Hani S Zaher; Rachel Green
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

Review 10.  Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2014-11-01       Impact factor: 3.931
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