Literature DB >> 9233821

Release factor RF3 in E.coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP-dependent manner.

D V Freistroffer1, M Y Pavlov, J MacDougall, R H Buckingham, M Ehrenberg.   

Abstract

Ribosomes complexed with synthetic mRNA and peptidyl-tRNA, ready for peptide release, were purified by gel filtration and used to study the function of release factor RF3 and guanine nucleotides in the termination of protein synthesis. The peptide-releasing activity of RF1 and RF2 in limiting concentrations was stimulated by the addition of RF3 and GTP, stimulated, though to a lesser extent, by RF3 and a non-hydrolysable GTP analogue, and inhibited by RF3 and GDP or RF3 without guanine nucleotide. With short incubation times allowing only a single catalytic cycle of RF1 or RF2, peptide release activity was independent of RF3 and guanine nucleotide. RF3 hydrolysis of GTP to GDP + P(i) was dependent only on ribosomes and not on RF1 or RF2. RF3 affected neither the rate of association of RF1 and RF2 with the ribosome nor the catalytic rate of peptide release. A model is proposed which explains how RF3 recycles RF1 and RF2 by displacing the factors from the ribosome after the release of peptide.

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Year:  1997        PMID: 9233821      PMCID: PMC1170035          DOI: 10.1093/emboj/16.13.4126

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  26 in total

1.  Selection of the mRNA translation initiation region by Escherichia coli ribosomes.

Authors:  R A Calogero; C L Pon; M A Canonaco; C O Gualerzi
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

2.  Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction.

Authors:  K Mullis; F Faloona; S Scharf; R Saiki; G Horn; H Erlich
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1986

Review 3.  The role of guanosine 5'-triphosphate in polypeptide chain elongation.

Authors:  Y Kaziro
Journal:  Biochim Biophys Acta       Date:  1978-09-21

4.  Purification of Excherichia coli methionine tRNAF and methionine tRNAM and studies on their biophysical and biochemical properties.

Authors:  T Seno; M Kobayashi; S Nishimura
Journal:  Biochim Biophys Acta       Date:  1968-11-20

5.  Polypeptide chain termination in cell-free extracts of E. coli.

Authors:  M C Ganoza
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Release factor-dependent false stops are infrequent in Escherichia coli.

Authors:  F Jørgensen; F M Adamski; W P Tate; C G Kurland
Journal:  J Mol Biol       Date:  1993-03-05       Impact factor: 5.469

8.  Rapid purification of highly active ribosomes from Escherichia coli.

Authors:  P C Jelenc
Journal:  Anal Biochem       Date:  1980-07-01       Impact factor: 3.365

9.  Sequential translation of trinucleotide codons for the initiation and termination of protein synthesis.

Authors:  C T Caskey; R Tompkins; E Scolnick; T Caryk; M Nirenberg
Journal:  Science       Date:  1968-10-04       Impact factor: 47.728

10.  Nucleoside triphosphate regeneration decreases the frequency of translation errors.

Authors:  P C Jelenc; C G Kurland
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

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  99 in total

1.  Translation termination in eukaryotes: polypeptide release factor eRF1 is composed of functionally and structurally distinct domains.

Authors:  L Y Frolova; T I Merkulova; L L Kisselev
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2.  Origins of minigene-dependent growth inhibition in bacterial cells.

Authors:  V Heurgué-Hamard; V Dinçbas; R H Buckingham; M Ehrenberg
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

3.  One protein from two open reading frames: mechanism of a 50 nt translational bypass.

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4.  Crystal structure of the ribosome recycling factor from Escherichia coli.

Authors:  K K Kim; K Min; S W Suh
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

5.  The accuracy of codon recognition by polypeptide release factors.

Authors:  D V Freistroffer; M Kwiatkowski; R H Buckingham; M Ehrenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

6.  Functional mapping of ribosome-contact sites in the ribosome recycling factor: a structural view from a tRNA mimic.

Authors:  T Fujiwara; K Ito; Y Nakamura
Journal:  RNA       Date:  2001-01       Impact factor: 4.942

7.  Sequestration of specific tRNA species cognate to the last sense codon of an overproduced gratuitous protein.

Authors:  J Menez; V Heurgué-Hamard; R H Buckingham
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

8.  Suppression of eukaryotic translation termination by selected RNAs.

Authors:  J Carnes; L Frolova; S Zinnen; G Drugeon; M Phillippe; J Justesen; A L Haenni; L Leinwand; L L Kisselev; M Yarus
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

9.  Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.

Authors:  T Toyoda; O F Tin; K Ito; T Fujiwara; T Kumasaka; M Yamamoto; M B Garber; Y Nakamura
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

10.  Role of ribosome recycling factor (RRF) in translational coupling.

Authors:  Y Inokuchi; A Hirashima; Y Sekine; L Janosi; A Kaji
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

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