| Literature DB >> 22096500 |
Sheng-Bo Liu1, Li-Ping Qiao, Hai-Lun He, Qian Zhang, Xiu-Lan Chen, Wei-Zhi Zhou, Bai-Cheng Zhou, Yu-Zhong Zhang.
Abstract
Zunongwangia profunda SM-A87 isolated from deep-sea sediment can secrete large quantity ofEntities:
Mesh:
Substances:
Year: 2011 PMID: 22096500 PMCID: PMC3214017 DOI: 10.1371/journal.pone.0026825
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Plackett–Burman experimental design for screening of culture conditions affecting EPS production and broth viscosity of strain SM-A87a.
| Run |
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| EPS production (g/L) | Broth viscosity (mPa•s) |
| 1 | 30 | 15 | 5 | 3 | 8.5 | 25 | 2 | 6 | −1 | 1 | −1 | 4.35 | 519.9 |
| 2 | 20 | 15 | 7.5 | 2 | 8.5 | 25 | 3 | 6 | −1 | −1 | 1 | 2.65 | 116 |
| 3 | 30 | 10 | 7.5 | 3 | 7.5 | 25 | 3 | 8 | −1 | −1 | −1 | 5.77 | 2148 |
| 4 | 20 | 15 | 5 | 3 | 8.5 | 15 | 3 | 8 | 1 | −1 | −1 | 4.09 | 863.8 |
| 5 | 20 | 10 | 7.5 | 2 | 8.5 | 25 | 2 | 8 | 1 | 1 | −1 | 3.04 | 299.9 |
| 6 | 20 | 10 | 5 | 3 | 7.5 | 25 | 3 | 6 | 1 | 1 | 1 | 4.07 | 451.9 |
| 7 | 30 | 10 | 5 | 2 | 8.5 | 15 | 3 | 8 | −1 | 1 | 1 | 7.01 | 3521 |
| 8 | 30 | 15 | 5 | 2 | 7.5 | 25 | 2 | 8 | 1 | −1 | 1 | 3.69 | 671.9 |
| 9 | 30 | 15 | 7.5 | 2 | 7.5 | 15 | 3 | 6 | 1 | 1 | −1 | 5.75 | 1564 |
| 10 | 20 | 15 | 7.5 | 3 | 7.5 | 15 | 2 | 8 | −1 | 1 | 1 | 4.08 | 463.9 |
| 11 | 30 | 10 | 7.5 | 3 | 8.5 | 15 | 2 | 6 | 1 | −1 | 1 | 6.97 | 2323.667 |
| 12 | 20 | 10 | 5 | 2 | 7.5 | 15 | 2 | 6 | −1 | −1 | −1 | 4.64 | 939.8 |
X 1, lactose (g/L); X 2, peptone (g/L); X 3 , yeast extract (g/L); X 4, sea salt (%); X 5, pH; X 6, temperature (°C) ; X 7, inoculum size (%); X 8 , time (day); X 9, X 10 and X 11, dummy variables.
Experiment design of steepest ascent and corresponding responsea.
| Lactose (g/L) | Peptone (g/L) | Temperature (°C) | EPS production (g/L) | Broth viscosity (mPa•s) | |
| Base point | 25.00 | 12.50 | 20.00 | ||
| Origin step unit | 5.00 | 2.50 | 5.00 | ||
| Slope | 0.897 | −0.579 | −0.748 | ||
| Proportion | 4.49 | −1.45 | −3.74 | ||
| New unit | 6.00 | −1.94 | −5.00 | ||
| Experiment 1 | 25.00 | 12.50 | 20.00 | 4.84 | 2203.67 |
| Experiment 2 | 31.00 | 10.56 | 15.00 | 3.17 | 144 |
| Experiment 3 | 37.00 | 8.62 | 10.00 | 7.35 | 4771 |
| Experiment 4 | 42.00 | 6.68 | 5.00 | 1.29 | 24 |
X 1, lactose; X 2, Peptone; X 6 , temperature.
zero level in the PB design in Table 1.
range of the unity level.
estimated coefficient ratio from Eq. (1).
origin step unit × slope.
Proportion ×1.337, where 1.337 is a factor determined by experimenter based on process knowledge or other practical consideration, and 1.337 is appropriate in this example.
The matrix of the CCD experiment and the corresponding experimental data.
| Run |
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| EPS production (g/L) | Broth viscosity (mPa•s) | |||
| Coded level | Real level (g/L) | Coded level | Real level (g/L) | Coded level | Real level (°C) | |||
| 1 | −1 | 30 | −1 | 6.5 | −1 | 8 | 6.81 | 3947 |
| 2 | +1 | 40 | −1 | 6.5 | −1 | 8 | 6.78 | 3695 |
| 3 | −1 | 30 | +1 | 10.5 | −1 | 8 | 8.25 | 5495 |
| 4 | +1 | 40 | +1 | 10.5 | −1 | 8 | 7.04 | 4515 |
| 5 | −1 | 30 | −1 | 6.5 | +1 | 12 | 7.05 | 4551 |
| 6 | +1 | 40 | −1 | 6.5 | +1 | 12 | 7.58 | 4747 |
| 7 | −1 | 30 | +1 | 10.5 | +1 | 12 | 6.97 | 4301 |
| 8 | +1 | 40 | +1 | 10.5 | +1 | 12 | 6.58 | 3377.5 |
| 9 | −1.68 | 26.6 | 0 | 8.5 | 0 | 10 | 8.41 | 6503 |
| 10 | +1.68 | 43.4 | 0 | 8.5 | 0 | 10 | 7.71 | 5079 |
| 11 | 0 | 35 | −1.68 | 5.14 | 0 | 10 | 7.25 | 4579 |
| 12 | 0 | 35 | +1.68 | 11.86 | 0 | 10 | 7.13 | 4559 |
| 13 | 0 | 35 | 0 | 8.5 | −1.68 | 6.64 | 6.81 | 3923 |
| 14 | 0 | 35 | 0 | 8.5 | +1.68 | 13.36 | 6.93 | 4091 |
| 15 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.39 | 6663 |
| 16 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.70 | 6239 |
| 17 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.60 | 6799 |
| 18 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.62 | 6443 |
| 19 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.47 | 6415 |
| 20 | 0 | 35 | 0 | 8.5 | 0 | 10 | 8.49 | 6611 |
Figure 1Effect of carbon sources on the EPS production and broth viscosity of strain SM-A87.
The concentration of each carbon source was 30 g/L. The graph shows data from triplicate experiments (mean ± S.D.).
Identification of significant variables for EPS production and broth viscosity of strain SM-A87 using PB design.
| Variables | EPS production | Broth viscosity | ||||||
| Coefficient estimate | % Contribution |
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| Coefficient estimate | % Contribution |
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| Model | − | − | 33.62 | 0.0075 | − | − | 13.15 | 0.0288 |
| Intercept | 4.60 | − | − | − | 1156.98 | − | − | − |
| Lactose | 0.90 | 43.31 | 120.52 | 0.0016 | 634.43 | 41.40 | 44.80 | 0.0068 |
| Peptone | −0.58 | 18.49 | 50.28 | 0.0058 | −457.06 | 21.49 | 23.25 | 0.0170 |
| Yeast extract | 0.019 | 0.019 | 0.052 | 0.8342 | −4.40 | 1.994E-003 | 2.157E-003 | 0.9659 |
| Sea salt | 0.21 | 2.50 | 6.80 | 0.0799 | −28.45 | 0.083 | 0.090 | 0.7836 |
| pH | 4.191E-003 | 9.676E-004 | 2.632E-003 | 0.9623 | 117.06 | 1.41 | 1.53 | 0.3047 |
| Temperature | −0.75 | 30.86 | 83.92 | 0.0028 | −455.71 | 21.36 | 23.11 | 0.0171 |
| Inoculation | 0.22 | 2.61 | 7.10 | 0.0761 | 287.14 | 8.48 | 9.18 | 0.0563 |
| Time | −0.045 | 0.11 | 0.31 | 0.6184 | 171.10 | 3.01 | 3.26 | 0.1688 |
R 2 = 0.9890.
R 2 = 0.9723.
Model terms are significant.
Variance analysis of response surface quadratic model for EPS production and broth viscosity of strain SM-A87.
| Source | df | EPS production | Broth viscosity | ||||||
| Sum of Squares | Mean Square |
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| Sum of Squares | Mean Square |
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| Model | 9 | 11.00 | 1.22 | 44.78 | <0.0001 | 2.438E+007 | 2.708E+006 | 32.96 | <0.0001 |
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| 1 | 0.38 | 0.38 | 13.86 | 0.0040 | 1.388E+006 | 1.388E+006 | 16.90 | 0.0021 |
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| 1 | 0.013 | 0.013 | 0.47 | 0.5096 | 37419.36 | 37419.36 | 0.46 | 0.5151 |
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| 1 | 0,017 | 0.017 | 0.63 | 0.4459 | 11306.90 | 11306.90 | 0.14 | 0.7184 |
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| 1 | 0.55 | 0.55 | 20.17 | 0.0012 | 4.267E+005 | 4.267E+005 | 5.19 | 0.0459 |
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| 1 | 0.24 | 0.24 | 8.93 | 0.0136 | 31815.03 | 31815.03 | 0.39 | 0.5477 |
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| 1 | 0.97 | 0.97 | 35.37 | 0.0001 | 1.988E+006 | 1.988E+006 | 24.19 | 0.0006 |
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| 1 | 0.63 | 0.63 | 22.96 | 0.0007 | 1.623E+006 | 1.623E+006 | 19.75 | 0.0012 |
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| 1 | 3.83 | 3.83 | 140.47 | <0.0001 | 8.492E+006 | 8.492E+006 | 103.35 | <0.0001 |
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| 1 | 5.68 | 5.68 | 207.98 | <0.0001 | 1.346E+007 | 1.346E+007 | 163.77 | <0.0001 |
| Residual | 10 | 0.27 | 0.027 | 8.217E+005 | 82170.07 | ||||
| Lack of Fit | 5 | 0.21 | 0.041 | 3.09 | 0.1207 | 6.196E+005 | 1.239E+005 | 3.07 | 0.1221 |
| Pure Error | 5 | 0.067 | 0.013 | 2.021E+005 | 40413.87 | ||||
| Cor Total | 19 | 11.27 | 2.520E+007 | ||||||
R 2 = 0.9758; Adj R 2 = 0.9540; CV = 2.17%.
R 2 = 0.9674; Adj R 2 = 0.9380; CV = 5.59%.
Model terms are significant.
Figure 2Three-dimensional plots and corresponding contour plots of the effect of three variables on EPS production.
When the effect of two variables was plotted, the other variable was set at the central level. A, interaction of lactose and peptone; B, interaction of lactose and temperature; C, interaction of peptone and temperature.
Figure 3Three-dimensional plots and corresponding contour plots of the effect of three variables on broth viscosity.
When the effect of two variables was plotted, the other variable was set at central levels. A, interaction of lactose and peptone; B, interaction of lactose and temperature; C, interaction of peptone and temperature.
Figure 4The fermentation process of strain SM-A87 cultured under the predicted optimum culture conditions.
The EPS production, broth viscosity and cell growth were detected with time. The culture medium consisted of 32.21 g/L lactose, 8.87 g/L peptone, 1 g/L yeast extract. The pH was adjusted to 8.0, the incubation temperature was 9.8°C, and the culture volume was 100 mL/500 mL. The graph shows data from triplicate experiments (mean ± S.D.).
Figure 5Viscosity of different concentration of crude EPS solution under different shear rates.
Viscosity was measured by Brookfield viscometer with the small sample adapter and spindle S16 at 25°C. The graph shows data from triplicate experiments (mean ± S.D.).
Figure 6Effect of temperature, pH and inorganic salts on the viscosity of crude EPS solution.
Viscosity was measured by a Brookfield viscometer with the small sample adapter and the spindle S16. A, the effect of temperature on the EPS solution of different concentrations (0.2%, 0.4%, 0.6%, 0.8%, 1.0%, and 1.2% (w/v)); B, the effect of different pH (1–14) on 1% (w/v) EPS solution (25°C); C, the effect of different concentration of NaCl and CaCl2 (0–10%) on 1% (w/v) EPS solution (25°C). The graph shows data from triplicate experiments (mean ± S.D.).